RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 RNF175Q8N4F7 328 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 OR7G3Q8NG95 312 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 CHTF18Q8WVB6 975 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 LZICQ8WZA0 190 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 PKP4Q99569 1192 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 TRIT1Q9H3H1 467 aaKnown RBP16.63■□□□□ 0.25
BRCA2-204ENST00000530893 C11orf49Q9H6J7 331 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 PLGRKTQ9HBL7 147 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 SIRT5Q9NXA8 310 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 ZBBXA8MT70 800 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 PREPP48147 710 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 DGKGP49619 791 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 ST8SIA6P61647 398 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 DDX39BQ13838 428 aaKnown RBP16.62■□□□□ 0.25
BRCA2-204ENST00000530893 KEAP1Q14145 624 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 EP400NLQ6ZTU2 488 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 PTOV1Q86YD1 416 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 MYLIPQ8WY64 445 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 COQ8BQ96D53 544 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 THAP11Q96EK4 314 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 TPT1P8Q9HAU6 139 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 FAM8A1Q9UBU6 413 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 NAALAD2Q9Y3Q0 740 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 H3BM21 787 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 ZNF197O14709 1029 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 BCKDKO14874 412 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 ANXA4P09525 319 aaPredicted RBP16.62■□□□□ 0.25
BRCA2-204ENST00000530893 LAMP1P11279 417 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 IL7RP16871 459 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 CCNA2P20248 432 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 FPR1P21462 350 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 PRKACGP22612 351 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 RAE1P78406 368 aaKnown RBP16.62■□□□□ 0.25
BRCA2-204ENST00000530893 MEP1AQ16819 746 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 CTU2Q2VPK5 515 aaKnown RBP16.62■□□□□ 0.25
BRCA2-204ENST00000530893 ZNF658BQ4V348 819 aaPredicted RBP16.62■□□□□ 0.25
BRCA2-204ENST00000530893 CAPN13Q6MZZ7 669 aaPredicted RBP16.62■□□□□ 0.25
BRCA2-204ENST00000530893 MED27Q6P2C8 311 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 PARS2Q7L3T8 475 aaKnown RBP16.62■□□□□ 0.25
BRCA2-204ENST00000530893 RBM23Q86U06 439 aaKnown RBP16.62■□□□□ 0.25
BRCA2-204ENST00000530893 SYNPOQ8N3V7 929 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 WDR34Q96EX3 536 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 DTD2Q96FN9 168 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 DCUN1D5Q9BTE7 237 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 GPN2Q9H9Y4 310 aaPredicted RBP16.62■□□□□ 0.25
BRCA2-204ENST00000530893 SLC27A6Q9Y2P4 619 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 SNX5Q9Y5X3 404 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 U3KQV3 271 aa16.62■□□□□ 0.25
BRCA2-204ENST00000530893 NOTCH4Q99466 2003 aa16.61■□□□□ 0.25
BRCA2-204ENST00000530893 M0QX08 132 aa16.61■□□□□ 0.25
BRCA2-204ENST00000530893 C1orf105O95561 183 aa16.61■□□□□ 0.25
BRCA2-204ENST00000530893 CPSF4O95639 269 aaKnown RBP16.61■□□□□ 0.25
BRCA2-204ENST00000530893 PRNPP04156 253 aa16.61■□□□□ 0.25
BRCA2-204ENST00000530893 CISD3P0C7P0 127 aa16.61■□□□□ 0.25
BRCA2-204ENST00000530893 BDKRB1P46663 353 aa16.61■□□□□ 0.25
BRCA2-204ENST00000530893 RXRGP48443 463 aa16.61■□□□□ 0.25
BRCA2-204ENST00000530893 DHCR24Q15392 516 aa16.61■□□□□ 0.25
BRCA2-204ENST00000530893 KDM4DQ6B0I6 523 aa16.61■□□□□ 0.25
BRCA2-204ENST00000530893 GTF2IRD2BQ6EKJ0 949 aa16.61■□□□□ 0.25
BRCA2-204ENST00000530893 SLCO4C1Q6ZQN7 724 aa16.61■□□□□ 0.25
BRCA2-204ENST00000530893 ZNF765Q7L2R6 523 aa16.61■□□□□ 0.25
BRCA2-204ENST00000530893 GTF2IRD2Q86UP8 949 aa16.61■□□□□ 0.25
BRCA2-204ENST00000530893 C1orf52Q8N6N3 182 aaKnown RBP16.61■□□□□ 0.25
BRCA2-204ENST00000530893 HUS1BQ8NHY5 278 aa16.61■□□□□ 0.25
BRCA2-204ENST00000530893 COQ10AQ96MF6 247 aa16.61■□□□□ 0.25
BRCA2-204ENST00000530893 EFCAB11Q9BUY7 163 aa16.61■□□□□ 0.25
BRCA2-204ENST00000530893 EHD1Q9H4M9 534 aa16.61■□□□□ 0.25
BRCA2-204ENST00000530893 PCDHGB1Q9Y5G3 927 aa16.61■□□□□ 0.25
BRCA2-204ENST00000530893 C1orf226A1L170 272 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 MGAT4DA6NG13 374 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 GABRR3A8MPY1 467 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 SLC1A7O00341 560 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 FOXE1O00358 373 aaPredicted RBP16.6■□□□□ 0.25
BRCA2-204ENST00000530893 RNASET2O00584 256 aaKnown RBP16.6■□□□□ 0.25
BRCA2-204ENST00000530893 MATN1P21941 496 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 TIA1P31483 386 aaKnown RBP eCLIP16.6■□□□□ 0.25
BRCA2-204ENST00000530893 CXCR4P61073 352 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 PPP1R8Q12972 351 aaKnown RBP16.6■□□□□ 0.25
BRCA2-204ENST00000530893 GRIN2CQ14957 1233 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 TEAD4Q15561 434 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 CCSMST1Q4G0I0 132 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 HORMAD1Q86X24 394 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 NPAS3Q8IXF0 933 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 CLECL1Q8IZS7 167 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 SNX19Q92543 992 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 SH3KBP1Q96B97 665 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 ZNF514Q96K75 400 aaPredicted RBP16.6■□□□□ 0.25
BRCA2-204ENST00000530893 ZNF282Q9UDV7 671 aaPredicted RBP16.6■□□□□ 0.25
BRCA2-204ENST00000530893 FAF1Q9UNN5 650 aaPredicted RBP16.6■□□□□ 0.25
BRCA2-204ENST00000530893 ABCG2Q9UNQ0 655 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 ERVK-11Q9UQG0 969 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 HOXC11O43248 304 aaPredicted RBP16.6■□□□□ 0.25
BRCA2-204ENST00000530893 JRKO75564 520 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 ETHE1O95571 254 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 ITIH1P19827 911 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 IDSP22304 550 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 BMPR1AP36894 532 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 ITGA1P56199 1179 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 ELP6Q0PNE2 266 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 PAGE2BQ5JRK9 111 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms