RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 ATG101Q9BSB4 218 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 RHNO1Q9BSD3 238 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 CDK19Q9BWU1 502 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 CACNG6Q9BXT2 260 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 PANK2Q9BZ23 570 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 MTMR12Q9C0I1 747 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 OR2B2Q9GZK3 357 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 SDCBP2Q9H190 292 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 CPVLQ9H3G5 476 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 IARS2Q9NSE4 1012 aaKnown RBP4.13□□□□□ -1.75
C11orf88-204ENST00000529661 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.13□□□□□ -1.75
C11orf88-204ENST00000529661 GPR132Q9UNW8 380 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 RIPK3Q9Y572 518 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 ACEP12821 1306 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 GPRASP1Q5JY77 1395 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 A0A0B4J203 849 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 C2CD4DB7Z1M9 353 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 PRSS46E5RG02 174 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 CTDSPLO15194 276 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 EDIL3O43854 480 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 KERAO60938 352 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 RAD51DO75771 328 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 UROSP10746 265 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 HLA-DPA1P20036 260 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 NPBWR1P48145 328 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 UBXN1Q04323 297 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 ARHGAP1Q07960 439 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 AP1B1Q10567 949 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 RPS6KA1Q15418 735 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 C20orf194Q5TEA3 1177 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 ALKBH5Q6P6C2 394 aaKnown RBP4.12□□□□□ -1.75
C11orf88-204ENST00000529661 GPR141Q7Z602 305 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 PIGWQ7Z7B1 504 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 STPG4Q8N801 248 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 MGARPQ8TDB4 240 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 CKAP2Q8WWK9 683 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 TM9SF4Q92544 642 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 PYCR2Q96C36 320 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 ZNF524Q96C55 264 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 ATP6V0BQ99437 205 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 SLC5A7Q9GZV3 580 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 SHARPINQ9H0F6 387 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 PHPT1Q9NRX4 125 aaPredicted RBP4.12□□□□□ -1.75
C11orf88-204ENST00000529661 TMEM161AQ9NX61 479 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 CHKBQ9Y259 395 aa4.12□□□□□ -1.75
C11orf88-204ENST00000529661 C17orf105B2RV13 164 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 F8VVB4 439 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 F8VWA3 439 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 NPIPA3F8WFD2 350 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 NTN3O00634 580 aaPredicted RBP4.11□□□□□ -1.75
C11orf88-204ENST00000529661 AKAP3O75969 853 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 DDHD2O94830 711 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 CAVIN2O95810 425 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 OLFM2O95897 454 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 PNPP00491 289 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 MT-ND3P03897 115 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 STAG3L1P0CL83 205 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 C8orf89P0DMQ9 161 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 F3P13726 295 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 CD59P13987 128 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 CYP2A7P20853 494 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 DUTP33316 252 aaKnown RBP4.11□□□□□ -1.75
C11orf88-204ENST00000529661 OR3A1P47881 315 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 GCNT1Q02742 428 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 IL10RBQ08334 325 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 TRAP1Q12931 704 aaKnown RBP4.11□□□□□ -1.75
C11orf88-204ENST00000529661 RPA4Q13156 261 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 LASP1Q14847 261 aaKnown RBP4.11□□□□□ -1.75
C11orf88-204ENST00000529661 SGCBQ16585 318 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 AARDQ4LEZ3 155 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 ZC2HC1CQ53FD0 456 aaPredicted RBP4.11□□□□□ -1.75
C11orf88-204ENST00000529661 XKR6Q5GH73 641 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 WDR38Q5JTN6 314 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 ZNF383Q8NA42 475 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 RSPH1Q8WYR4 309 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 BCL2L2Q92843 193 aaPredicted RBP4.11□□□□□ -1.75
C11orf88-204ENST00000529661 WBP2Q969T9 261 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 NSL1Q96IY1 281 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 F2RL3Q96RI0 385 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 UBQLN3Q9H347 655 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 RIMS4Q9H426 269 aaPredicted RBP4.11□□□□□ -1.75
C11orf88-204ENST00000529661 C10orf88Q9H8K7 445 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 P4HTMQ9NXG6 502 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 SPG21Q9NZD8 308 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 FLRT3Q9NZU0 649 aa4.11□□□□□ -1.75
C11orf88-204ENST00000529661 RUVBL2Q9Y230 463 aaKnown RBP4.11□□□□□ -1.75
C11orf88-204ENST00000529661 HBS1LQ9Y450 684 aaKnown RBP4.11□□□□□ -1.75
C11orf88-204ENST00000529661 TRAV18A0A075B6X5 111 aa4.1□□□□□ -1.75
C11orf88-204ENST00000529661 C13orf42A0A1B0GVH6 325 aa4.1□□□□□ -1.75
C11orf88-204ENST00000529661 SMIM30A4D0T7 59 aa4.1□□□□□ -1.75
C11orf88-204ENST00000529661 DDX39AO00148 427 aaKnown RBP4.1□□□□□ -1.75
C11orf88-204ENST00000529661 CIDEAO60543 219 aa4.1□□□□□ -1.75
C11orf88-204ENST00000529661 ATP9AO75110 1047 aa4.1□□□□□ -1.75
C11orf88-204ENST00000529661 DFFBO76075 338 aa4.1□□□□□ -1.75
C11orf88-204ENST00000529661 BAG3O95817 575 aa4.1□□□□□ -1.75
C11orf88-204ENST00000529661 ALDH4A1P30038 563 aa4.1□□□□□ -1.75
C11orf88-204ENST00000529661 ALDH1B1P30837 517 aa4.1□□□□□ -1.75
C11orf88-204ENST00000529661 CTNNB1P35222 781 aa4.1□□□□□ -1.75
C11orf88-204ENST00000529661 NME5P56597 212 aa4.1□□□□□ -1.75
C11orf88-204ENST00000529661 TEFQ10587 303 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms