RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 C17orf105B2RV13 164 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 E9PI62 339 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 M0R296 226 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 CYTIPO60759 359 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 LDB3O75112 727 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 TSC22D2O75157 780 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 GMNNO75496 209 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 ZNF821O75541 412 aaPredicted RBP3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 STBD1O95210 358 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 IGLV2-14P01704 120 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 CHRNGP07510 517 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 KRT3P12035 628 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 GOT1P17174 413 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 CBLP22681 906 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 CERS1P27544 350 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 MARCKSP29966 332 aaPredicted RBP3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 SSTR2P30874 369 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 MMP13P45452 471 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 DHPSP49366 369 aaPredicted RBP3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 PEX5P50542 639 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 METAP1P53582 386 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 CX3CL1P78423 397 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 SPIBQ01892 262 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 SLC3A1Q07837 685 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 KLC1Q07866 573 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 MRPL28Q13084 256 aaKnown RBP3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 MSLNQ13421 630 aaPredicted RBP3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 SNTB2Q13425 540 aaKnown RBP3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 CARTPTQ16568 116 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 STX1AQ16623 288 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 SHROOM1Q2M3G4 852 aaPredicted RBP3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 TMEM35AQ53FP2 167 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 PHLDA2Q53GA4 152 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 BOLA3Q53S33 107 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 SPDYCQ5MJ68 293 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 FNBP1LQ5T0N5 605 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 OTUD1Q5VV17 481 aaPredicted RBP3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 ERICH6BQ5W0A0 696 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 SULT1C3Q6IMI6 304 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 ADGRD2Q7Z7M1 963 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 RTN4RL2Q86UN3 420 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 CUZD1Q86UP6 607 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 TMEM139Q8IV31 216 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 MMD2Q8IY49 270 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 RNF113BQ8IZP6 322 aaKnown RBP3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 ZCCHC7Q8N3Z6 543 aaKnown RBP3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 RDM1Q8NG50 284 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 U2AF1L4Q8WU68 220 aaKnown RBP3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 TMEM255BQ8WV15 326 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 ABTB1Q969K4 478 aaPredicted RBP3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 RFT1Q96AA3 541 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 ULK4Q96C45 1275 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 TXNDC15Q96J42 360 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 C20orf173Q96LM9 149 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 GUCD1Q96NT3 240 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 CSF3RQ99062 836 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 PRRX2Q99811 253 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 FICDQ9BVA6 458 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 TRMT61BQ9BVS5 477 aaKnown RBP3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 ZNF416Q9BWM5 594 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 C1QTNF7Q9BXJ2 289 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 ZMYND12Q9H0C1 365 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 TMEM117Q9H0C3 514 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 SDCBP2Q9H190 292 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 RIMS4Q9H426 269 aaPredicted RBP3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 TMEM231Q9H6L2 316 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 TMEM30AQ9NV96 361 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 ATXN10Q9UBB4 475 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 IL20RAQ9UHF4 553 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 DAPK2Q9UIK4 370 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 AGO1Q9UL18 857 aaKnown RBP3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 SMC3Q9UQE7 1217 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 AMDHD2Q9Y303 409 aa3.3□□□□□ -1.88
AMBRA1-208ENST00000529558 BAZ1BQ9UIG0 1483 aaKnown RBP3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 PDS5AQ29RF7 1337 aaKnown RBP3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 CXCL11O14625 94 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 ADAM10O14672 748 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 ZNF197O14709 1029 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 ARPC2O15144 300 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 MAGEB3O15480 346 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 LANCL1O43813 399 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 WDR1O75083 606 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 VPS26AO75436 327 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 PAPSS2O95340 614 aaPredicted RBP3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 BAG3O95817 575 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 PRKCGP05129 697 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 TFAP2AP05549 437 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 LIPFP07098 398 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 KRT19P08727 400 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 FAM106CPP0CH98 169 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 CALCBP10092 127 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 EPB41P11171 864 aaKnown RBP3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 CYP19A1P11511 503 aaPredicted RBP3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 MYOD1P15172 320 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 B4GALT1P15291 398 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 CKMT2P17540 419 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 POLR2CP19387 275 aaPredicted RBP3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 PROZP22891 400 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 DGKAP23743 735 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 MPGP29372 298 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms