RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 CASP9P55211 416 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 SNRPEP62304 92 aaKnown RBP5.44□□□□□ -1.54
PCF11-202ENST00000528336 MBTD1Q05BQ5 628 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 TRA2AQ13595 282 aaKnown RBP eCLIP5.44□□□□□ -1.54
PCF11-202ENST00000528336 RCN2Q14257 317 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 KIR2DS5Q14953 304 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 DUOXA1Q1HG43 343 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 ASPRV1Q53RT3 343 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 SLC25A24Q6NUK1 477 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 ZCCHC12Q6PEW1 402 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 ANGPTL8Q6UXH0 198 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 Q6ZTC4 211 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 KBTBD6Q86V97 674 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 SIX6OS1Q8N1H7 587 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 DRAXINQ8NBI3 349 aaPredicted RBP5.44□□□□□ -1.54
PCF11-202ENST00000528336 ATAD1Q8NBU5 361 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 ITFG2Q969R8 447 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 ZNF354BQ96LW1 612 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 DGAT2Q96PD7 388 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 TBCDQ9BTW9 1192 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 ABCG8Q9H221 673 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 SLC38A7Q9NVC3 462 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 FAM118AQ9NWS6 357 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 CHCHD3Q9NX63 227 aaKnown RBP5.44□□□□□ -1.54
PCF11-202ENST00000528336 AATFQ9NY61 560 aaKnown RBP eCLIP5.44□□□□□ -1.54
PCF11-202ENST00000528336 FMN2Q9NZ56 1722 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 CLIP2Q9UDT6 1046 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 AMACRQ9UHK6 382 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 FAM153AQ9UHL3 310 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 HACL1Q9UJ83 578 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 WDR37Q9Y2I8 494 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 RPH3AQ9Y2J0 694 aaPredicted RBP5.44□□□□□ -1.54
PCF11-202ENST00000528336 JRKLQ9Y4A0 524 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 ATP7BP35670 1465 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 LNP1A1A4G5 178 aa5.43□□□□□ -1.54
PCF11-202ENST00000528336 SLC9B1P1A6NJY1 282 aa5.43□□□□□ -1.54
PCF11-202ENST00000528336 GPR89AB7ZAQ6 455 aa5.43□□□□□ -1.54
PCF11-202ENST00000528336 FAM86B1E9PN63 330 aa5.43□□□□□ -1.54
PCF11-202ENST00000528336 CCDC188H7C350 402 aa5.43□□□□□ -1.54
PCF11-202ENST00000528336 ANGPT2O15123 496 aa5.43□□□□□ -1.54
PCF11-202ENST00000528336 ALPPP05187 535 aa5.43□□□□□ -1.54
PCF11-202ENST00000528336 HMOX1P09601 288 aa5.43□□□□□ -1.54
PCF11-202ENST00000528336 GPR89BP0CG08 455 aa5.43□□□□□ -1.54
PCF11-202ENST00000528336 ALPPL2P10696 532 aa5.43□□□□□ -1.54
PCF11-202ENST00000528336 LINC01547P58512 204 aaPredicted RBP5.43□□□□□ -1.54
PCF11-202ENST00000528336 MECOMQ03112 1051 aa5.43□□□□□ -1.54
PCF11-202ENST00000528336 PLA2G7Q13093 441 aa5.43□□□□□ -1.54
PCF11-202ENST00000528336 PPP1R7Q15435 360 aa5.43□□□□□ -1.54
PCF11-202ENST00000528336 INTS8Q75QN2 995 aaKnown RBP5.43□□□□□ -1.54
PCF11-202ENST00000528336 ZNF329Q86UD4 541 aa5.43□□□□□ -1.54
PCF11-202ENST00000528336 DZIP1Q86YF9 867 aaKnown RBP5.43□□□□□ -1.54
PCF11-202ENST00000528336 OR6C4Q8NGE1 309 aa5.43□□□□□ -1.54
PCF11-202ENST00000528336 OR56B2PQ8NGI1 322 aa5.43□□□□□ -1.54
PCF11-202ENST00000528336 SLC13A3Q8WWT9 602 aa5.43□□□□□ -1.54
PCF11-202ENST00000528336 SMPDL3BQ92485 455 aa5.43□□□□□ -1.54
PCF11-202ENST00000528336 TMCO6Q96DC7 493 aa5.43□□□□□ -1.54
PCF11-202ENST00000528336 PRMT6Q96LA8 375 aaPredicted RBP5.43□□□□□ -1.54
PCF11-202ENST00000528336 ZNF582Q96NG8 517 aaPredicted RBP5.43□□□□□ -1.54
PCF11-202ENST00000528336 KIFC3Q9BVG8 833 aa5.43□□□□□ -1.54
PCF11-202ENST00000528336 FAM129AQ9BZQ8 928 aa5.43□□□□□ -1.54
PCF11-202ENST00000528336 OSGEPL1Q9H4B0 414 aa5.43□□□□□ -1.54
PCF11-202ENST00000528336 TFB2MQ9H5Q4 396 aaKnown RBP5.43□□□□□ -1.54
PCF11-202ENST00000528336 SLA2Q9H6Q3 261 aa5.43□□□□□ -1.54
PCF11-202ENST00000528336 ATAD3AQ9NVI7 634 aa5.43□□□□□ -1.54
PCF11-202ENST00000528336 DDX18Q9NVP1 670 aaKnown RBP5.43□□□□□ -1.54
PCF11-202ENST00000528336 NMRK1Q9NWW6 199 aa5.43□□□□□ -1.54
PCF11-202ENST00000528336 MIOSQ9NXC5 875 aa5.43□□□□□ -1.54
PCF11-202ENST00000528336 DISP3Q9P2K9 1392 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 AHDC1Q5TGY3 1603 aaPredicted RBP5.42□□□□□ -1.54
PCF11-202ENST00000528336 USP32Q8NFA0 1604 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 ENO4A6NNW6 628 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 KPNA7A9QM74 516 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 ADAMDEC1O15204 470 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 AVILO75366 819 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 PDE9AO76083 593 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 PRSS1P07477 247 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 CD9P21926 228 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 MMP15P51511 669 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 PNLIPRP2P54317 469 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 STX1BP61266 288 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 CETN1Q12798 172 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 GAGE2BQ13066 116 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 PRKAA1Q13131 559 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 CUL2Q13617 745 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 MXD4Q14582 209 aaPredicted RBP5.42□□□□□ -1.54
PCF11-202ENST00000528336 PDK1Q15118 436 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 RPS6KA1Q15418 735 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 C15orf59Q2T9L4 293 aaPredicted RBP5.42□□□□□ -1.54
PCF11-202ENST00000528336 GAGE2EQ4V326 116 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 CYP4A22Q5TCH4 519 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 SHEQ5VZ18 495 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 GAGE2AQ6NT46 116 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 ARHGAP11AQ6P4F7 1023 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 ZYG11AQ6WRX3 759 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 MARK2Q7KZI7 788 aaKnown RBP5.42□□□□□ -1.54
PCF11-202ENST00000528336 CEP57Q86XR8 500 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 MINDY1Q8N5J2 469 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 MRPS27Q92552 414 aaKnown RBP5.42□□□□□ -1.54
PCF11-202ENST00000528336 STAMBPL1Q96FJ0 436 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 SCRN2Q96FV2 425 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms