RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 STT3BQ8TCJ2 826 aa31.45■■■□□ 2.63
SSSCA1-205ENST00000527920 DRC3Q9H069 523 aa31.45■■■□□ 2.63
SSSCA1-205ENST00000527920 C5AR2Q9P296 337 aa31.45■■■□□ 2.63
SSSCA1-205ENST00000527920 HS3ST3B1Q9Y662 390 aa31.45■■■□□ 2.63
SSSCA1-205ENST00000527920 NPPBP16860 134 aa31.44■■■□□ 2.62
SSSCA1-205ENST00000527920 TAS2R39P59534 338 aa31.44■■■□□ 2.62
SSSCA1-205ENST00000527920 MYBPC3Q14896 1274 aa31.44■■■□□ 2.62
SSSCA1-205ENST00000527920 NDUFA9Q16795 377 aa31.44■■■□□ 2.62
SSSCA1-205ENST00000527920 PPP1R3AQ16821 1122 aa31.44■■■□□ 2.62
SSSCA1-205ENST00000527920 ZXDCQ2QGD7 858 aaPredicted RBP31.44■■■□□ 2.62
SSSCA1-205ENST00000527920 PLD3Q8IV08 490 aa31.44■■■□□ 2.62
SSSCA1-205ENST00000527920 GALNT16Q8N428 558 aa31.44■■■□□ 2.62
SSSCA1-205ENST00000527920 ABHD11Q8NFV4 315 aa31.44■■■□□ 2.62
SSSCA1-205ENST00000527920 MIEF2Q96C03 454 aa31.44■■■□□ 2.62
SSSCA1-205ENST00000527920 SOX17Q9H6I2 414 aaPredicted RBP31.44■■■□□ 2.62
SSSCA1-205ENST00000527920 ATP13A2Q9NQ11 1180 aa31.44■■■□□ 2.62
SSSCA1-205ENST00000527920 SMYD2Q9NRG4 433 aa31.44■■■□□ 2.62
SSSCA1-205ENST00000527920 CCDC88CQ9P219 2028 aa31.44■■■□□ 2.62
SSSCA1-205ENST00000527920 A6NL46 340 aa31.43■■■□□ 2.62
SSSCA1-205ENST00000527920 SOCS6O14544 535 aa31.43■■■□□ 2.62
SSSCA1-205ENST00000527920 P2RX6O15547 441 aa31.43■■■□□ 2.62
SSSCA1-205ENST00000527920 DPM1O60762 260 aa31.43■■■□□ 2.62
SSSCA1-205ENST00000527920 ZGLP1P0C6A0 271 aa31.43■■■□□ 2.62
SSSCA1-205ENST00000527920 SSTR1P30872 391 aa31.43■■■□□ 2.62
SSSCA1-205ENST00000527920 SLC26A3P40879 764 aa31.43■■■□□ 2.62
SSSCA1-205ENST00000527920 AIMP2Q13155 320 aaKnown RBP31.43■■■□□ 2.62
SSSCA1-205ENST00000527920 VN1R4Q7Z5H5 301 aa31.43■■■□□ 2.62
SSSCA1-205ENST00000527920 CRB3Q9BUF7 120 aa31.43■■■□□ 2.62
SSSCA1-205ENST00000527920 C14orf105Q9NVL8 296 aa31.43■■■□□ 2.62
SSSCA1-205ENST00000527920 FBXL4Q9UKA2 621 aa31.43■■■□□ 2.62
SSSCA1-205ENST00000527920 SH2B3Q9UQQ2 575 aa31.43■■■□□ 2.62
SSSCA1-205ENST00000527920 NBASA2RRP1 2371 aa31.43■■■□□ 2.62
SSSCA1-205ENST00000527920 MDC1Q14676 2089 aaKnown RBP31.42■■■□□ 2.62
SSSCA1-205ENST00000527920 UBR5O95071 2799 aaPredicted RBP31.42■■■□□ 2.62
SSSCA1-205ENST00000527920 TCRBV9S1A1TA0A576 114 aa31.42■■■□□ 2.62
SSSCA1-205ENST00000527920 PLTPP55058 493 aa31.42■■■□□ 2.62
SSSCA1-205ENST00000527920 FOXK1P85037 733 aa31.42■■■□□ 2.62
SSSCA1-205ENST00000527920 CDKL1Q00532 357 aa31.42■■■□□ 2.62
SSSCA1-205ENST00000527920 KLC1Q07866 573 aa31.42■■■□□ 2.62
SSSCA1-205ENST00000527920 KIRREL2Q6UWL6 708 aa31.42■■■□□ 2.62
SSSCA1-205ENST00000527920 CAPN12Q6ZSI9 719 aa31.42■■■□□ 2.62
SSSCA1-205ENST00000527920 AMER3Q8N944 861 aa31.42■■■□□ 2.62
SSSCA1-205ENST00000527920 FBXO25Q8TCJ0 367 aa31.42■■■□□ 2.62
SSSCA1-205ENST00000527920 CPNE1Q99829 537 aa31.42■■■□□ 2.62
SSSCA1-205ENST00000527920 SARGQ9BW04 601 aa31.42■■■□□ 2.62
SSSCA1-205ENST00000527920 TGIF2Q9GZN2 237 aa31.42■■■□□ 2.62
SSSCA1-205ENST00000527920 MAP4K5Q9Y4K4 846 aa31.42■■■□□ 2.62
SSSCA1-205ENST00000527920 FAM159BA6NKW6 160 aa31.41■■■□□ 2.62
SSSCA1-205ENST00000527920 FOXS1O43638 330 aa31.41■■■□□ 2.62
SSSCA1-205ENST00000527920 ALPPP05187 535 aa31.41■■■□□ 2.62
SSSCA1-205ENST00000527920 ANXA5P08758 320 aa31.41■■■□□ 2.62
SSSCA1-205ENST00000527920 SAT1P21673 171 aa31.41■■■□□ 2.62
SSSCA1-205ENST00000527920 GRK3P35626 688 aa31.41■■■□□ 2.62
SSSCA1-205ENST00000527920 POU4F1Q01851 419 aa31.41■■■□□ 2.62
SSSCA1-205ENST00000527920 RBBP7Q16576 425 aa31.41■■■□□ 2.62
SSSCA1-205ENST00000527920 MKKSQ9NPJ1 570 aaPredicted RBP31.41■■■□□ 2.62
SSSCA1-205ENST00000527920 TXNDC16Q9P2K2 825 aa31.41■■■□□ 2.62
SSSCA1-205ENST00000527920 IKZF3Q9UKT9 509 aa31.41■■■□□ 2.62
SSSCA1-205ENST00000527920 IPO13O94829 963 aaKnown RBP31.4■■■□□ 2.62
SSSCA1-205ENST00000527920 CDH1P12830 882 aa31.4■■■□□ 2.62
SSSCA1-205ENST00000527920 SHISA6Q6ZSJ9 500 aa31.4■■■□□ 2.62
SSSCA1-205ENST00000527920 C3orf62Q6ZUJ4 267 aa31.4■■■□□ 2.62
SSSCA1-205ENST00000527920 CEP97Q8IW35 865 aa31.4■■■□□ 2.62
SSSCA1-205ENST00000527920 OR4K1Q8NGD4 311 aa31.4■■■□□ 2.62
SSSCA1-205ENST00000527920 ALKBH8Q96BT7 664 aaKnown RBP31.4■■■□□ 2.62
SSSCA1-205ENST00000527920 TM4SF19Q96DZ7 209 aa31.4■■■□□ 2.62
SSSCA1-205ENST00000527920 MMABQ96EY8 250 aaPredicted RBP31.4■■■□□ 2.62
SSSCA1-205ENST00000527920 GPAMQ9HCL2 828 aa31.4■■■□□ 2.62
SSSCA1-205ENST00000527920 TRPC4Q9UBN4 977 aa31.4■■■□□ 2.62
SSSCA1-205ENST00000527920 PCDH17O14917 1159 aa31.39■■■□□ 2.62
SSSCA1-205ENST00000527920 C1QAP02745 245 aa31.39■■■□□ 2.62
SSSCA1-205ENST00000527920 CCR8P51685 355 aa31.39■■■□□ 2.62
SSSCA1-205ENST00000527920 SLC12A2P55011 1212 aa31.39■■■□□ 2.62
SSSCA1-205ENST00000527920 TUBB8Q3ZCM7 444 aa31.39■■■□□ 2.62
SSSCA1-205ENST00000527920 ZDHHC24Q6UX98 284 aa31.39■■■□□ 2.62
SSSCA1-205ENST00000527920 ADAMTSL2Q86TH1 951 aa31.39■■■□□ 2.62
SSSCA1-205ENST00000527920 CAMKVQ8NCB2 501 aa31.39■■■□□ 2.62
SSSCA1-205ENST00000527920 PYCR2Q96C36 320 aa31.39■■■□□ 2.62
SSSCA1-205ENST00000527920 TSPAN17Q96FV3 270 aa31.39■■■□□ 2.62
SSSCA1-205ENST00000527920 OR4K3Q96R72 315 aa31.39■■■□□ 2.62
SSSCA1-205ENST00000527920 C3orf18Q9UK00 162 aa31.39■■■□□ 2.62
SSSCA1-205ENST00000527920 CXorf49A8MYA2 514 aaPredicted RBP31.38■■■□□ 2.61
SSSCA1-205ENST00000527920 H0YIG0 161 aa31.38■■■□□ 2.61
SSSCA1-205ENST00000527920 WISP3O95389 354 aaPredicted RBP31.38■■■□□ 2.61
SSSCA1-205ENST00000527920 GUCA1CO95843 209 aa31.38■■■□□ 2.61
SSSCA1-205ENST00000527920 GP5P40197 560 aa31.38■■■□□ 2.61
SSSCA1-205ENST00000527920 BCL6P41182 706 aa31.38■■■□□ 2.61
SSSCA1-205ENST00000527920 GPX6P59796 221 aa31.38■■■□□ 2.61
SSSCA1-205ENST00000527920 ZNF460Q14592 562 aa31.38■■■□□ 2.61
SSSCA1-205ENST00000527920 IGFL3Q6UXB1 125 aa31.38■■■□□ 2.61
SSSCA1-205ENST00000527920 OR11G2Q8NGC1 345 aa31.38■■■□□ 2.61
SSSCA1-205ENST00000527920 C16orf45Q96MC5 204 aaPredicted RBP31.38■■■□□ 2.61
SSSCA1-205ENST00000527920 GPR22Q99680 433 aa31.38■■■□□ 2.61
SSSCA1-205ENST00000527920 RBBP8Q99708 897 aa31.38■■■□□ 2.61
SSSCA1-205ENST00000527920 ZNF552Q9H707 407 aaPredicted RBP31.38■■■□□ 2.61
SSSCA1-205ENST00000527920 OARD1Q9Y530 152 aa31.38■■■□□ 2.61
SSSCA1-205ENST00000527920 TNRC6AQ8NDV7 1962 aaKnown RBP31.37■■■□□ 2.61
SSSCA1-205ENST00000527920 A0A0A6YYC8 382 aaPredicted RBP31.37■■■□□ 2.61
SSSCA1-205ENST00000527920 A0A1W2PQ72 361 aa31.37■■■□□ 2.61
SSSCA1-205ENST00000527920 I3L1I5 382 aaPredicted RBP31.37■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms