RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 RPA4Q13156 261 aa16.67■□□□□ 0.26
PCDHA6-202ENST00000527624 SGCGQ13326 291 aa16.67■□□□□ 0.26
PCDHA6-202ENST00000527624 DYNC1I2Q13409 638 aaKnown RBP16.67■□□□□ 0.26
PCDHA6-202ENST00000527624 PON2Q15165 354 aa16.67■□□□□ 0.26
PCDHA6-202ENST00000527624 RUNDC3AQ59EK9 446 aa16.67■□□□□ 0.26
PCDHA6-202ENST00000527624 DUS1LQ6P1R4 473 aaKnown RBP16.67■□□□□ 0.26
PCDHA6-202ENST00000527624 BORAQ6PGQ7 559 aa16.67■□□□□ 0.26
PCDHA6-202ENST00000527624 GCNT7Q6ZNI0 430 aa16.67■□□□□ 0.26
PCDHA6-202ENST00000527624 GPR180Q86V85 440 aa16.67■□□□□ 0.26
PCDHA6-202ENST00000527624 TP53I13Q8NBR0 393 aaPredicted RBP16.67■□□□□ 0.26
PCDHA6-202ENST00000527624 PAPD5Q8NDF8 572 aaKnown RBP16.67■□□□□ 0.26
PCDHA6-202ENST00000527624 SLC5A11Q8WWX8 675 aa16.67■□□□□ 0.26
PCDHA6-202ENST00000527624 FIG4Q92562 907 aa16.67■□□□□ 0.26
PCDHA6-202ENST00000527624 RAD51AP1Q96B01 352 aa16.67■□□□□ 0.26
PCDHA6-202ENST00000527624 ITCHQ96J02 903 aa16.67■□□□□ 0.26
PCDHA6-202ENST00000527624 HAUS8Q9BT25 410 aa16.67■□□□□ 0.26
PCDHA6-202ENST00000527624 C9orf16Q9BUW7 83 aa16.67■□□□□ 0.26
PCDHA6-202ENST00000527624 KCNH6Q9H252 994 aa16.67■□□□□ 0.26
PCDHA6-202ENST00000527624 RMND5AQ9H871 391 aa16.67■□□□□ 0.26
PCDHA6-202ENST00000527624 CAAP1Q9H8G2 361 aa16.67■□□□□ 0.26
PCDHA6-202ENST00000527624 BRF2Q9HAW0 419 aa16.67■□□□□ 0.26
PCDHA6-202ENST00000527624 FZD3Q9NPG1 666 aa16.67■□□□□ 0.26
PCDHA6-202ENST00000527624 PTTG2Q9NZH5 202 aa16.67■□□□□ 0.26
PCDHA6-202ENST00000527624 DMTF1Q9Y222 760 aa16.67■□□□□ 0.26
PCDHA6-202ENST00000527624 INVSQ9Y283 1065 aa16.67■□□□□ 0.26
PCDHA6-202ENST00000527624 TICRRQ7Z2Z1 1910 aa16.67■□□□□ 0.26
PCDHA6-202ENST00000527624 TRBV5-3A0A0A0MS03 114 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 PIPSLA2A3N6 862 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 KLF8O95600 359 aaPredicted RBP16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 FUCA1P04066 466 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 C1GALT1C1LP0DN25 315 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 UMPSP11172 480 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 ACP5P13686 325 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 HSD3B1P14060 373 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 NELFEP18615 380 aaKnown RBP16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 HSD3B2P26439 372 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 RPS21P63220 83 aaKnown RBP16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 RAE1P78406 368 aaKnown RBP16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 ATP6AP1Q15904 470 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 UGT8Q16880 541 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 METRNLQ641Q3 311 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 SDE2Q6IQ49 451 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 DCUN1D3Q8IWE4 304 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 C10orf111Q8N326 155 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 RMND5BQ96G75 393 aaPredicted RBP16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 REXO4Q9GZR2 422 aaKnown RBP16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 OSGEPL1Q9H4B0 414 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 OAZ3Q9UMX2 235 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 A0A096LPI6 279 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 SAP18O00422 153 aaKnown RBP16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 GSTA4O15217 222 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 ERN1O75460 977 aaKnown RBP16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 MYO1DO94832 1006 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 DNTTP04053 509 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 COX7A2P14406 83 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 HOXB2P14652 356 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 GGT1P19440 569 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 CLCNKAP51800 687 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 E2F2Q14209 437 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 PRAMEF14Q5SWL7 426 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 CROCCQ5TZA2 2017 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 PRAMEF13Q5VWM6 474 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 ATG9BQ674R7 924 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 OXR1Q8N573 874 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 FAM47BQ8NA70 645 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 ZNF740Q8NDX6 193 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 ZNF548Q8NEK5 533 aaPredicted RBP16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 C11orf24Q96F05 449 aaPredicted RBP16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 MAN2B2Q9Y2E5 1009 aa16.66■□□□□ 0.26
PCDHA6-202ENST00000527624 RNF103-CHMP3A0A140T963 221 aa16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 A0A1W2PQF6 199 aa16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 CCDC160A6NGH7 325 aa16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 RFXANKO14593 260 aa16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 SCAMP1O15126 338 aa16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 KMOO15229 486 aa16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 ACOX3O15254 700 aa16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 ANXA4P09525 319 aaPredicted RBP16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 CDH1P12830 882 aa16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 ZNF23P17027 643 aa16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 EFNA1P20827 205 aaPredicted RBP16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 KELP23276 732 aa16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 PTPN6P29350 595 aa16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 TRIM23P36406 574 aa16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 AGERQ15109 404 aa16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 HKDC1Q2TB90 917 aa16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 LRIF1Q5T3J3 769 aa16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 TMTC4Q5T4D3 741 aa16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 NXPE4Q6UWF7 544 aa16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 SPRED1Q7Z699 444 aa16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 FAM124AQ86V42 546 aa16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 TBC1D21Q8IYX1 336 aa16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 REPS1Q96D71 796 aa16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 HHIPQ96QV1 700 aa16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 GABRG3Q99928 467 aa16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 SH3GL1Q99961 368 aa16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 CPPED1Q9BRF8 314 aaPredicted RBP16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 EFCAB11Q9BUY7 163 aa16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 C1QTNF2Q9BXJ5 285 aa16.65■□□□□ 0.26
PCDHA6-202ENST00000527624 C8orf4Q9NR00 106 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms