RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 VWA2Q5GFL6 755 aa9.12□□□□□ -0.95
TRAPPC4-206ENST00000525303 MRNIPQ6NTE8 343 aa9.12□□□□□ -0.95
TRAPPC4-206ENST00000525303 GFRALQ6UXV0 394 aa9.12□□□□□ -0.95
TRAPPC4-206ENST00000525303 SDCCAG8Q86SQ7 713 aaPredicted RBP9.12□□□□□ -0.95
TRAPPC4-206ENST00000525303 KBTBD2Q8IY47 623 aa9.12□□□□□ -0.95
TRAPPC4-206ENST00000525303 KRT222Q8N1A0 295 aa9.12□□□□□ -0.95
TRAPPC4-206ENST00000525303 SIRT6Q8N6T7 355 aa9.12□□□□□ -0.95
TRAPPC4-206ENST00000525303 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.12□□□□□ -0.95
TRAPPC4-206ENST00000525303 BRIX1Q8TDN6 353 aaKnown RBP9.12□□□□□ -0.95
TRAPPC4-206ENST00000525303 IFT81Q8WYA0 676 aa9.12□□□□□ -0.95
TRAPPC4-206ENST00000525303 PSMF1Q92530 271 aa9.12□□□□□ -0.95
TRAPPC4-206ENST00000525303 NR4A3Q92570 626 aa9.12□□□□□ -0.95
TRAPPC4-206ENST00000525303 ZUFSPQ96AP4 578 aa9.12□□□□□ -0.95
TRAPPC4-206ENST00000525303 ZNF669Q96BR6 464 aaPredicted RBP9.12□□□□□ -0.95
TRAPPC4-206ENST00000525303 MIEF2Q96C03 454 aa9.12□□□□□ -0.95
TRAPPC4-206ENST00000525303 TCF12Q99081 682 aa9.12□□□□□ -0.95
TRAPPC4-206ENST00000525303 FMO2Q99518 471 aa9.12□□□□□ -0.95
TRAPPC4-206ENST00000525303 RHOXF2Q9BQY4 288 aa9.12□□□□□ -0.95
TRAPPC4-206ENST00000525303 TSSK1BQ9BXA7 367 aa9.12□□□□□ -0.95
TRAPPC4-206ENST00000525303 ENAMQ9NRM1 1142 aa9.12□□□□□ -0.95
TRAPPC4-206ENST00000525303 CATSPERZQ9NTU4 200 aa9.12□□□□□ -0.95
TRAPPC4-206ENST00000525303 STOX2Q9P2F5 926 aaPredicted RBP9.12□□□□□ -0.95
TRAPPC4-206ENST00000525303 ZNF282Q9UDV7 671 aaPredicted RBP9.12□□□□□ -0.95
TRAPPC4-206ENST00000525303 SLC2A6Q9UGQ3 507 aa9.12□□□□□ -0.95
TRAPPC4-206ENST00000525303 ZC3H7BQ9UGR2 993 aaKnown RBP9.12□□□□□ -0.95
TRAPPC4-206ENST00000525303 TEX264Q9Y6I9 313 aa9.12□□□□□ -0.95
TRAPPC4-206ENST00000525303 FAM169AQ9Y6X4 670 aa9.12□□□□□ -0.95
TRAPPC4-206ENST00000525303 HCFC1P51610 2035 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 LOC105369274A0A096LPK9 316 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 TRAV17A0A0B4J275 112 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 TRGV8A0A0C4DH27 118 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 LOC102723532A0A0G2JNH3 316 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 ESYT3A0FGR9 886 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 KRT87PA6NCN2 255 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 TP73O15350 636 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 CD3EAPO15446 510 aaKnown RBP9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 SLCO2B1O94956 709 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 UQCRHP07919 91 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 PRR35P0CG20 571 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 COX6A1P12074 109 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 OGNP20774 298 aaKnown RBP9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 FBLP22087 321 aaKnown RBP9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 AOAHP28039 575 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 NMBRP28336 390 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 PHBP35232 272 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 SOX11P35716 441 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 ELK3P41970 407 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 BDKRB1P46663 353 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 SRSF11Q05519 484 aaKnown RBP9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 EEF1A2Q05639 463 aaKnown RBP9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 CRYMQ14894 314 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 SLMAPQ14BN4 828 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 INAQ16352 499 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 KCTD19Q17RG1 926 aaPredicted RBP9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 CCSMST1Q4G0I0 132 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 RNF187Q5TA31 235 aaPredicted RBP9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 ATG9BQ674R7 924 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 PRMT9Q6P2P2 845 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 TTC23LQ6PF05 361 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 ZDHHC24Q6UX98 284 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 NDUFAF7Q7L592 441 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 LDB1Q86U70 411 aaPredicted RBP9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 LAPTM4BQ86VI4 370 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 CCDC25Q86WR0 208 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 PALM2Q8IXS6 379 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 ZBED8Q8IZ13 594 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 OR4N4Q8N0Y3 316 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 OTUD6BQ8N6M0 293 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 FBXO36Q8NEA4 188 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 OR2L3Q8NG85 312 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 SKA2Q8WVK7 121 aaPredicted RBP9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 ITLN2Q8WWU7 325 aaPredicted RBP9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 MFSD3Q96ES6 412 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 CCDC120Q96HB5 630 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 ZNF778Q96MU6 729 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 MIPEPQ99797 713 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 FAM167BQ9BTA0 163 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 RAB11FIP5Q9BXF6 653 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 SAYSD1Q9NPB0 183 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 ZDHHC18Q9NUE0 388 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 NSMCE4AQ9NXX6 385 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 SUCOQ9UBS9 1254 aaKnown RBP9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 CHMP2BQ9UQN3 213 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 KLF2Q9Y5W3 355 aaPredicted RBP9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 NFS1Q9Y697 457 aa9.11□□□□□ -0.95
TRAPPC4-206ENST00000525303 IGLV3-12A0A075B6K2 115 aa9.1□□□□□ -0.95
TRAPPC4-206ENST00000525303 ZCWPW2A0A1B0GU75 182 aa9.1□□□□□ -0.95
TRAPPC4-206ENST00000525303 IDSB3KWA1 339 aa9.1□□□□□ -0.95
TRAPPC4-206ENST00000525303 CCL21O00585 134 aa9.1□□□□□ -0.95
TRAPPC4-206ENST00000525303 FFAR3O14843 346 aa9.1□□□□□ -0.95
TRAPPC4-206ENST00000525303 GPR42O15529 346 aa9.1□□□□□ -0.95
TRAPPC4-206ENST00000525303 UNC5CO95185 931 aa9.1□□□□□ -0.95
TRAPPC4-206ENST00000525303 VAPBO95292 243 aa9.1□□□□□ -0.95
TRAPPC4-206ENST00000525303 FKBP9O95302 570 aa9.1□□□□□ -0.95
TRAPPC4-206ENST00000525303 C1orf105O95561 183 aa9.1□□□□□ -0.95
TRAPPC4-206ENST00000525303 SERPINA7P05543 415 aa9.1□□□□□ -0.95
TRAPPC4-206ENST00000525303 CELA2AP08217 269 aa9.1□□□□□ -0.95
TRAPPC4-206ENST00000525303 SNRPB2P08579 225 aaKnown RBP9.1□□□□□ -0.95
TRAPPC4-206ENST00000525303 ERVK-10P10266 1014 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms