RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 GPAMQ9HCL2 828 aa18.23■□□□□ 0.51
FBXO28-205ENST00000523990 ANAPC2Q9UJX6 822 aa18.23■□□□□ 0.51
FBXO28-205ENST00000523990 NXT1Q9UKK6 140 aaKnown RBP18.23■□□□□ 0.51
FBXO28-205ENST00000523990 SCN3AQ9NY46 2000 aa18.22■□□□□ 0.51
FBXO28-205ENST00000523990 NPEPPSL1A6NEC2 478 aa18.22■□□□□ 0.51
FBXO28-205ENST00000523990 CDC7O00311 574 aa18.22■□□□□ 0.51
FBXO28-205ENST00000523990 TXNDC9O14530 226 aa18.22■□□□□ 0.51
FBXO28-205ENST00000523990 CDH1P12830 882 aa18.22■□□□□ 0.51
FBXO28-205ENST00000523990 NPPBP16860 134 aa18.22■□□□□ 0.51
FBXO28-205ENST00000523990 POU4F1Q01851 419 aa18.22■□□□□ 0.51
FBXO28-205ENST00000523990 FDCSPQ8NFU4 85 aa18.22■□□□□ 0.51
FBXO28-205ENST00000523990 ATL1Q8WXF7 558 aa18.22■□□□□ 0.51
FBXO28-205ENST00000523990 NACC2Q96BF6 587 aa18.22■□□□□ 0.51
FBXO28-205ENST00000523990 OR4K3Q96R72 315 aa18.22■□□□□ 0.51
FBXO28-205ENST00000523990 GPR22Q99680 433 aa18.22■□□□□ 0.51
FBXO28-205ENST00000523990 HAUS8Q9BT25 410 aa18.22■□□□□ 0.51
FBXO28-205ENST00000523990 TRIM4Q9C037 500 aa18.22■□□□□ 0.51
FBXO28-205ENST00000523990 EPN3Q9H201 632 aa18.22■□□□□ 0.51
FBXO28-205ENST00000523990 SOX17Q9H6I2 414 aaPredicted RBP18.22■□□□□ 0.51
FBXO28-205ENST00000523990 CAB39LQ9H9S4 337 aa18.22■□□□□ 0.51
FBXO28-205ENST00000523990 ZDHHC18Q9NUE0 388 aa18.22■□□□□ 0.51
FBXO28-205ENST00000523990 P4HTMQ9NXG6 502 aa18.22■□□□□ 0.51
FBXO28-205ENST00000523990 TXNDC16Q9P2K2 825 aa18.22■□□□□ 0.51
FBXO28-205ENST00000523990 MTO1Q9Y2Z2 717 aaKnown RBP18.22■□□□□ 0.51
FBXO28-205ENST00000523990 MYO18BQ8IUG5 2567 aa18.21■□□□□ 0.51
FBXO28-205ENST00000523990 IGLV3-12A0A075B6K2 115 aa18.21■□□□□ 0.51
FBXO28-205ENST00000523990 KCNE1BA0A087WTH5 132 aa18.21■□□□□ 0.51
FBXO28-205ENST00000523990 FBLP22087 321 aaKnown RBP18.21■□□□□ 0.51
FBXO28-205ENST00000523990 MMP11P24347 488 aa18.21■□□□□ 0.51
FBXO28-205ENST00000523990 GP5P40197 560 aa18.21■□□□□ 0.51
FBXO28-205ENST00000523990 PGDP52209 483 aa18.21■□□□□ 0.51
FBXO28-205ENST00000523990 KLRB1Q12918 225 aa18.21■□□□□ 0.51
FBXO28-205ENST00000523990 DSG2Q14126 1118 aa18.21■□□□□ 0.51
FBXO28-205ENST00000523990 KBTBD12Q3ZCT8 623 aa18.21■□□□□ 0.51
FBXO28-205ENST00000523990 DCAF10Q5QP82 559 aa18.21■□□□□ 0.51
FBXO28-205ENST00000523990 SHISA6Q6ZSJ9 500 aa18.21■□□□□ 0.51
FBXO28-205ENST00000523990 ADAMTSL2Q86TH1 951 aa18.21■□□□□ 0.51
FBXO28-205ENST00000523990 STT3BQ8TCJ2 826 aa18.21■□□□□ 0.51
FBXO28-205ENST00000523990 ZNF592Q92610 1267 aa18.21■□□□□ 0.51
FBXO28-205ENST00000523990 COL26A1Q96A83 441 aa18.21■□□□□ 0.51
FBXO28-205ENST00000523990 FER1L6-AS2Q96M78 137 aa18.21■□□□□ 0.51
FBXO28-205ENST00000523990 NUDT9Q9BW91 350 aa18.21■□□□□ 0.51
FBXO28-205ENST00000523990 DRC3Q9H069 523 aa18.21■□□□□ 0.51
FBXO28-205ENST00000523990 ZNF282Q9UDV7 671 aaPredicted RBP18.21■□□□□ 0.51
FBXO28-205ENST00000523990 OARD1Q9Y530 152 aa18.21■□□□□ 0.51
FBXO28-205ENST00000523990 COL12A1Q99715 3063 aa18.2■□□□□ 0.5
FBXO28-205ENST00000523990 FEZF1A0PJY2 475 aa18.2■□□□□ 0.5
FBXO28-205ENST00000523990 PYCARD-AS1I3L0S3 204 aa18.2■□□□□ 0.5
FBXO28-205ENST00000523990 AGPSO00116 658 aa18.2■□□□□ 0.5
FBXO28-205ENST00000523990 PEX12O00623 359 aa18.2■□□□□ 0.5
FBXO28-205ENST00000523990 FOXS1O43638 330 aa18.2■□□□□ 0.5
FBXO28-205ENST00000523990 CASRP41180 1078 aa18.2■□□□□ 0.5
FBXO28-205ENST00000523990 SLC12A2P55011 1212 aa18.2■□□□□ 0.5
FBXO28-205ENST00000523990 CDKL1Q00532 357 aa18.2■□□□□ 0.5
FBXO28-205ENST00000523990 FAM53BQ14153 422 aa18.2■□□□□ 0.5
FBXO28-205ENST00000523990 TSNQ15631 228 aaKnown RBP18.2■□□□□ 0.5
FBXO28-205ENST00000523990 AMER3Q8N944 861 aa18.2■□□□□ 0.5
FBXO28-205ENST00000523990 ABHD11Q8NFV4 315 aa18.2■□□□□ 0.5
FBXO28-205ENST00000523990 THAP11Q96EK4 314 aa18.2■□□□□ 0.5
FBXO28-205ENST00000523990 DERL2Q9GZP9 239 aa18.2■□□□□ 0.5
FBXO28-205ENST00000523990 CDC14AQ9UNH5 594 aa18.2■□□□□ 0.5
FBXO28-205ENST00000523990 HS3ST3B1Q9Y662 390 aa18.2■□□□□ 0.5
FBXO28-205ENST00000523990 FLNCQ14315 2725 aa18.19■□□□□ 0.5
FBXO28-205ENST00000523990 SOCS6O14544 535 aa18.19■□□□□ 0.5
FBXO28-205ENST00000523990 PRPF4O43172 522 aaKnown RBP eCLIP18.19■□□□□ 0.5
FBXO28-205ENST00000523990 PHGDHO43175 533 aaKnown RBP18.19■□□□□ 0.5
FBXO28-205ENST00000523990 IGHEP01854 428 aa18.19■□□□□ 0.5
FBXO28-205ENST00000523990 STATHP02808 62 aa18.19■□□□□ 0.5
FBXO28-205ENST00000523990 ZGLP1P0C6A0 271 aa18.19■□□□□ 0.5
FBXO28-205ENST00000523990 STX2P32856 288 aa18.19■□□□□ 0.5
FBXO28-205ENST00000523990 SLC26A3P40879 764 aa18.19■□□□□ 0.5
FBXO28-205ENST00000523990 BCL6P41182 706 aa18.19■□□□□ 0.5
FBXO28-205ENST00000523990 SNRPNP63162 240 aaKnown RBP18.19■□□□□ 0.5
FBXO28-205ENST00000523990 GUCY2DQ02846 1103 aa18.19■□□□□ 0.5
FBXO28-205ENST00000523990 OCA2Q04671 838 aa18.19■□□□□ 0.5
FBXO28-205ENST00000523990 TLE1Q04724 770 aa18.19■□□□□ 0.5
FBXO28-205ENST00000523990 KLC1Q07866 573 aa18.19■□□□□ 0.5
FBXO28-205ENST00000523990 USP10Q14694 798 aaKnown RBP18.19■□□□□ 0.5
FBXO28-205ENST00000523990 ZKSCAN8Q15776 578 aaPredicted RBP18.19■□□□□ 0.5
FBXO28-205ENST00000523990 CTAGE3PQ8IX95 158 aa18.19■□□□□ 0.5
FBXO28-205ENST00000523990 MMGT1Q8N4V1 131 aa18.19■□□□□ 0.5
FBXO28-205ENST00000523990 CLEC1AQ8NC01 280 aa18.19■□□□□ 0.5
FBXO28-205ENST00000523990 NOA1Q8NC60 698 aaKnown RBP18.19■□□□□ 0.5
FBXO28-205ENST00000523990 OR4K1Q8NGD4 311 aa18.19■□□□□ 0.5
FBXO28-205ENST00000523990 FBF1Q8TES7 1133 aa18.19■□□□□ 0.5
FBXO28-205ENST00000523990 MIEF2Q96C03 454 aa18.19■□□□□ 0.5
FBXO28-205ENST00000523990 TSPAN17Q96FV3 270 aa18.19■□□□□ 0.5
FBXO28-205ENST00000523990 SARGQ9BW04 601 aa18.19■□□□□ 0.5
FBXO28-205ENST00000523990 GPR83Q9NYM4 423 aa18.19■□□□□ 0.5
FBXO28-205ENST00000523990 MRPS2Q9Y399 296 aaKnown RBP18.19■□□□□ 0.5
FBXO28-205ENST00000523990 PCDHGB7Q9Y5F8 929 aa18.19■□□□□ 0.5
FBXO28-205ENST00000523990 A0A0A6YYC8 382 aaPredicted RBP18.18■□□□□ 0.5
FBXO28-205ENST00000523990 A6NL46 340 aa18.18■□□□□ 0.5
FBXO28-205ENST00000523990 I3L1I5 382 aaPredicted RBP18.18■□□□□ 0.5
FBXO28-205ENST00000523990 LCMT2O60294 686 aaKnown RBP18.18■□□□□ 0.5
FBXO28-205ENST00000523990 ANXA5P08758 320 aa18.18■□□□□ 0.5
FBXO28-205ENST00000523990 GRK3P35626 688 aa18.18■□□□□ 0.5
FBXO28-205ENST00000523990 EFTUD2Q15029 972 aaKnown RBP eCLIP18.18■□□□□ 0.5
FBXO28-205ENST00000523990 VWA2Q5GFL6 755 aa18.18■□□□□ 0.5
FBXO28-205ENST00000523990 COLEC12Q5KU26 742 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms