RNA–Protein interactions for RNA: ENST00000523746.5

PTK2-250, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-250	ENST00000523746	SRD5A3	Q9H8P0	318 aa		4.17	□□□□□ -1.74
PTK2-250	ENST00000523746	IL1RAPL2	Q9NP60	686 aa		4.17	□□□□□ -1.74
PTK2-250	ENST00000523746		R4GN57	208 aa		4.17	□□□□□ -1.74
PTK2-250	ENST00000523746	STK36	Q9NRP7	1315 aa		4.17	□□□□□ -1.74
PTK2-250	ENST00000523746		A0A087WYN8	130 aa		4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	MTMR11	A4FU01	709 aa		4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	KBTBD13	C9JR72	458 aa		4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	NPIPA3	F8WFD2	350 aa		4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	ATP1B1	P05026	303 aa		4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	SP1	P08047	785 aa		4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	VDR	P11473	427 aa		4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	GNB3	P16520	340 aa		4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	HOXB6	P17509	224 aa	Known RBP	4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	ITIH1	P19827	911 aa		4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	SNU13	P55769	128 aa	Known RBP	4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	ST8SIA6	P61647	398 aa		4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	GNB1	P62873	340 aa		4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	OPCML	Q14982	345 aa		4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	MORF4L2	Q15014	288 aa		4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	KLHL22	Q53GT1	634 aa		4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	FAM46C	Q5VWP2	391 aa		4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	CTR9	Q6PD62	1173 aa		4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	PODNL1	Q6PEZ8	512 aa		4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	SLC25A47	Q6Q0C1	308 aa		4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	TMEM207	Q6UWW9	146 aa		4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	LEKR1	Q6ZMV7	388 aa		4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	LRTM2	Q8N967	370 aa		4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	CNBD1	Q8NA66	436 aa		4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	FAM76A	Q8TAV0	307 aa		4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	APOBEC4	Q8WW27	367 aa	Known RBP	4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	F2RL3	Q96RI0	385 aa		4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	PI4K2A	Q9BTU6	479 aa		4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	OR6C2	Q9NZP2	312 aa		4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	NOCT	Q9UK39	431 aa	Known RBP	4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	HBS1L	Q9Y450	684 aa	Known RBP	4.16	□□□□□ -1.74
PTK2-250	ENST00000523746	SLCO1B7	G3V0H7	640 aa		4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	FPGT	O14772	594 aa		4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	CTDSPL	O15194	276 aa		4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	NME6	O75414	186 aa	Predicted RBP	4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	GOSR1	O95249	250 aa		4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	GH1	P01241	217 aa		4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	KRT3	P12035	628 aa		4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	OAS2	P29728	719 aa	Known RBP	4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	ALDH1B1	P30837	517 aa		4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	KHK	P50053	298 aa		4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	STX1B	P61266	288 aa		4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	RBM39	Q14498	530 aa	Known RBP	4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	GTDC1	Q4AE62	458 aa		4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	IQCC	Q4KMZ1	466 aa		4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	C9orf50	Q5SZB4	431 aa		4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	4.15	□□□□□ -1.75	6e-7	■■■■■ 35.4
PTK2-250	ENST00000523746	LCN1P1	Q5VSP4	162 aa		4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	FUT10	Q6P4F1	479 aa		4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	PRSS35	Q8N3Z0	413 aa		4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	TMCO5A	Q8N6Q1	288 aa		4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	ZNF713	Q8N859	430 aa	Predicted RBP	4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	OR7A2P	Q8NGA2	310 aa		4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	OR5AP2	Q8NGF4	316 aa		4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	SAP25	Q8TEE9	199 aa		4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	GATAD1	Q8WUU5	269 aa		4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	LGALS12	Q96DT0	336 aa		4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	RBM41	Q96IZ5	413 aa	Known RBP	4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	TSSK2	Q96PF2	358 aa		4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	RASL10B	Q96S79	203 aa		4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	HNRNPAB	Q99729	332 aa	Known RBP	4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	CACNG6	Q9BXT2	260 aa		4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	RIMS4	Q9H426	269 aa	Predicted RBP	4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	PNPLA3	Q9NST1	481 aa		4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	C19orf25	Q9UFG5	118 aa	Predicted RBP	4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	PPP2R2C	Q9Y2T4	447 aa		4.15	□□□□□ -1.75
PTK2-250	ENST00000523746	IGHV4-4	A0A075B6R2	117 aa		4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	TRAV18	A0A075B6X5	111 aa		4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	IKBKB	O14920	756 aa		4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	ZNF263	O14978	683 aa		4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	TEX28	O15482	410 aa		4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	TRMU	O75648	421 aa	Known RBP	4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	CDC123	O75794	336 aa	Predicted RBP	4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	SEC24A	O95486	1093 aa		4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	AMBP	P02760	352 aa		4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	YES1	P07947	543 aa		4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	CEACAM1	P13688	526 aa		4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	SFTPD	P35247	375 aa		4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	NPBWR1	P48145	328 aa		4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	DNA2	P51530	1060 aa		4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	ADAR	P55265	1226 aa	Known RBP	4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	OR1D5	P58170	312 aa		4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	MYL7	Q01449	175 aa		4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	ARHGAP1	Q07960	439 aa		4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	C17orf67	Q0P5P2	114 aa		4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	TRIM29	Q14134	588 aa		4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	SMU1	Q2TAY7	513 aa		4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	FUT11	Q495W5	492 aa		4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	CCDC158	Q5M9N0	1113 aa		4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	TTC27	Q6P3X3	843 aa		4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	USP43	Q70EL4	1123 aa		4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	PIGW	Q7Z7B1	504 aa		4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	PRUNE1	Q86TP1	453 aa		4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	ANKRD46	Q86W74	232 aa		4.14	□□□□□ -1.75
PTK2-250	ENST00000523746	SNX32	Q86XE0	403 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms