RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 TXNDC9O14530 226 aa21.49■■□□□ 1.03
PVT1-218ENST00000523328 LIASO43766 372 aa21.49■■□□□ 1.03
PVT1-218ENST00000523328 PKMP14618 531 aaKnown RBP21.49■■□□□ 1.03
PVT1-218ENST00000523328 ETS1P14921 441 aa21.49■■□□□ 1.03
PVT1-218ENST00000523328 RELAQ04206 551 aa21.49■■□□□ 1.03
PVT1-218ENST00000523328 TUBA3CQ13748 450 aa21.49■■□□□ 1.03
PVT1-218ENST00000523328 ARHGAP19Q14CB8 494 aa21.49■■□□□ 1.03
PVT1-218ENST00000523328 BTBD16Q32M84 506 aa21.49■■□□□ 1.03
PVT1-218ENST00000523328 KRTCAP3Q53RY4 240 aa21.49■■□□□ 1.03
PVT1-218ENST00000523328 ACER2Q5QJU3 275 aa21.49■■□□□ 1.03
PVT1-218ENST00000523328 TUBA3EQ6PEY2 450 aa21.49■■□□□ 1.03
PVT1-218ENST00000523328 SPNS3Q6ZMD2 512 aa21.49■■□□□ 1.03
PVT1-218ENST00000523328 CPEB2Q7Z5Q1 589 aaKnown RBP21.49■■□□□ 1.03
PVT1-218ENST00000523328 METTL21AQ8WXB1 218 aa21.49■■□□□ 1.03
PVT1-218ENST00000523328 RERGQ96A58 199 aaPredicted RBP21.49■■□□□ 1.03
PVT1-218ENST00000523328 CYTH2Q99418 400 aa21.49■■□□□ 1.03
PVT1-218ENST00000523328 HES7Q9BYE0 225 aa21.49■■□□□ 1.03
PVT1-218ENST00000523328 PCYOX1Q9UHG3 505 aa21.49■■□□□ 1.03
PVT1-218ENST00000523328 NF1P21359 2839 aa21.49■■□□□ 1.03
PVT1-218ENST00000523328 ASPDHA6ND91 283 aa21.48■■□□□ 1.03
PVT1-218ENST00000523328 TTI1O43156 1089 aa21.48■■□□□ 1.03
PVT1-218ENST00000523328 NIPSNAP2O75323 286 aa21.48■■□□□ 1.03
PVT1-218ENST00000523328 PSIP1O75475 530 aaKnown RBP21.48■■□□□ 1.03
PVT1-218ENST00000523328 APRTP07741 180 aa21.48■■□□□ 1.03
PVT1-218ENST00000523328 ARNTP27540 789 aa21.48■■□□□ 1.03
PVT1-218ENST00000523328 NMBRP28336 390 aa21.48■■□□□ 1.03
PVT1-218ENST00000523328 CRADDP78560 199 aa21.48■■□□□ 1.03
PVT1-218ENST00000523328 TSTA3Q13630 321 aaPredicted RBP21.48■■□□□ 1.03
PVT1-218ENST00000523328 NCCRP1Q6ZVX7 275 aaPredicted RBP21.48■■□□□ 1.03
PVT1-218ENST00000523328 ACRBPQ8NEB7 543 aa21.48■■□□□ 1.03
PVT1-218ENST00000523328 FAM136AQ96C01 138 aa21.48■■□□□ 1.03
PVT1-218ENST00000523328 SCMH1Q96GD3 660 aa21.48■■□□□ 1.03
PVT1-218ENST00000523328 ZNF354BQ96LW1 612 aa21.48■■□□□ 1.03
PVT1-218ENST00000523328 NPAS2Q99743 824 aa21.48■■□□□ 1.03
PVT1-218ENST00000523328 TSPAN10Q9H1Z9 355 aaPredicted RBP21.48■■□□□ 1.03
PVT1-218ENST00000523328 TSPY26PQ9H489 355 aa21.48■■□□□ 1.03
PVT1-218ENST00000523328 FAM227AF5H4B4 570 aa21.47■■□□□ 1.03
PVT1-218ENST00000523328 IPO7O95373 1038 aaKnown RBP21.47■■□□□ 1.03
PVT1-218ENST00000523328 FTCDO95954 541 aa21.47■■□□□ 1.03
PVT1-218ENST00000523328 CYC1P08574 325 aa21.47■■□□□ 1.03
PVT1-218ENST00000523328 CAPN3P20807 821 aa21.47■■□□□ 1.03
PVT1-218ENST00000523328 FMO4P31512 558 aa21.47■■□□□ 1.03
PVT1-218ENST00000523328 CD96P40200 585 aa21.47■■□□□ 1.03
PVT1-218ENST00000523328 SESN2P58004 480 aaPredicted RBP21.47■■□□□ 1.03
PVT1-218ENST00000523328 ALDH6A1Q02252 535 aaKnown RBP21.47■■□□□ 1.03
PVT1-218ENST00000523328 RAD9BQ6WBX8 426 aa21.47■■□□□ 1.03
PVT1-218ENST00000523328 ACBD4Q8NC06 268 aa21.47■■□□□ 1.03
PVT1-218ENST00000523328 OR9A4Q8NGU2 314 aa21.47■■□□□ 1.03
PVT1-218ENST00000523328 LPGAT1Q92604 370 aa21.47■■□□□ 1.03
PVT1-218ENST00000523328 PANX2Q96RD6 677 aa21.47■■□□□ 1.03
PVT1-218ENST00000523328 PKP4Q99569 1192 aa21.47■■□□□ 1.03
PVT1-218ENST00000523328 SPOCK3Q9BQ16 436 aa21.47■■□□□ 1.03
PVT1-218ENST00000523328 KLHL1Q9NR64 748 aa21.47■■□□□ 1.03
PVT1-218ENST00000523328 UTP6Q9NYH9 597 aaKnown RBP21.47■■□□□ 1.03
PVT1-218ENST00000523328 GALPQ9UBC7 116 aa21.47■■□□□ 1.03
PVT1-218ENST00000523328 H0YIG0 161 aa21.46■■□□□ 1.03
PVT1-218ENST00000523328 HAT1O14929 419 aa21.46■■□□□ 1.03
PVT1-218ENST00000523328 CCNDBP1O95273 360 aa21.46■■□□□ 1.03
PVT1-218ENST00000523328 AVPR1BP47901 424 aa21.46■■□□□ 1.03
PVT1-218ENST00000523328 ST13P50502 369 aaKnown RBP21.46■■□□□ 1.03
PVT1-218ENST00000523328 PNLIPRP1P54315 467 aa21.46■■□□□ 1.03
PVT1-218ENST00000523328 NDUFA9Q16795 377 aa21.46■■□□□ 1.03
PVT1-218ENST00000523328 ACSBG2Q5FVE4 666 aa21.46■■□□□ 1.03
PVT1-218ENST00000523328 CRLF3Q8IUI8 442 aa21.46■■□□□ 1.03
PVT1-218ENST00000523328 PLD3Q8IV08 490 aa21.46■■□□□ 1.03
PVT1-218ENST00000523328 SIAH3Q8IW03 269 aa21.46■■□□□ 1.03
PVT1-218ENST00000523328 CEP97Q8IW35 865 aa21.46■■□□□ 1.03
PVT1-218ENST00000523328 PPFIBP2Q8ND30 876 aa21.46■■□□□ 1.03
PVT1-218ENST00000523328 FRMD6Q96NE9 622 aa21.46■■□□□ 1.03
PVT1-218ENST00000523328 ANKRD10Q9NXR5 420 aa21.46■■□□□ 1.03
PVT1-218ENST00000523328 ITPR3Q14573 2671 aa21.46■■□□□ 1.03
PVT1-218ENST00000523328 OR2W5A6NFC9 320 aa21.45■■□□□ 1.02
PVT1-218ENST00000523328 E7ENX8 843 aa21.45■■□□□ 1.02
PVT1-218ENST00000523328 NPIPA5E9PKD4 350 aa21.45■■□□□ 1.02
PVT1-218ENST00000523328 MAN1A2O60476 641 aa21.45■■□□□ 1.02
PVT1-218ENST00000523328 NSA2O95478 260 aaKnown RBP21.45■■□□□ 1.02
PVT1-218ENST00000523328 MLYCDO95822 493 aa21.45■■□□□ 1.02
PVT1-218ENST00000523328 SLC16A8O95907 504 aa21.45■■□□□ 1.02
PVT1-218ENST00000523328 EEF1DP29692 281 aaKnown RBP21.45■■□□□ 1.02
PVT1-218ENST00000523328 HSD17B2P37059 387 aa21.45■■□□□ 1.02
PVT1-218ENST00000523328 TAP2Q03519 686 aa21.45■■□□□ 1.02
PVT1-218ENST00000523328 OR1C1Q15619 314 aa21.45■■□□□ 1.02
PVT1-218ENST00000523328 TYSND1Q2T9J0 566 aa21.45■■□□□ 1.02
PVT1-218ENST00000523328 KLHL38Q2WGJ6 581 aa21.45■■□□□ 1.02
PVT1-218ENST00000523328 MINDY4Q4G0A6 757 aa21.45■■□□□ 1.02
PVT1-218ENST00000523328 SPINK14Q6IE38 97 aa21.45■■□□□ 1.02
PVT1-218ENST00000523328 PRSS41Q7RTY9 318 aa21.45■■□□□ 1.02
PVT1-218ENST00000523328 ANKRD37Q7Z713 158 aa21.45■■□□□ 1.02
PVT1-218ENST00000523328 CDH24Q86UP0 819 aa21.45■■□□□ 1.02
PVT1-218ENST00000523328 SYCE1Q8N0S2 351 aa21.45■■□□□ 1.02
PVT1-218ENST00000523328 ZNF480Q8WV37 535 aa21.45■■□□□ 1.02
PVT1-218ENST00000523328 HES6Q96HZ4 224 aa21.45■■□□□ 1.02
PVT1-218ENST00000523328 UTP23Q9BRU9 249 aaKnown RBP21.45■■□□□ 1.02
PVT1-218ENST00000523328 TRIM5Q9C035 493 aa21.45■■□□□ 1.02
PVT1-218ENST00000523328 ENKD1Q9H0I2 346 aa21.45■■□□□ 1.02
PVT1-218ENST00000523328 KCNK13Q9HB14 408 aa21.45■■□□□ 1.02
PVT1-218ENST00000523328 GPAMQ9HCL2 828 aa21.45■■□□□ 1.02
PVT1-218ENST00000523328 C19orf25Q9UFG5 118 aaPredicted RBP21.45■■□□□ 1.02
PVT1-218ENST00000523328 NPIPA1Q9UND3 350 aa21.45■■□□□ 1.02
PVT1-218ENST00000523328 ZNF148Q9UQR1 794 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 269.6 ms