RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 ARMC8Q8IUR7 673 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 MCATQ8IVS2 390 aaKnown RBP7.31□□□□□ -1.24
HDAC3-216ENST00000523088 PHACTR4Q8IZ21 702 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 ZNF786Q8N393 782 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 PPM1KQ8N3J5 372 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 GUF1Q8N442 669 aaKnown RBP7.31□□□□□ -1.24
HDAC3-216ENST00000523088 C1orf52Q8N6N3 182 aaKnown RBP7.31□□□□□ -1.24
HDAC3-216ENST00000523088 C4orf32Q8N8J7 132 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 LEMD2Q8NC56 503 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 OR7G3Q8NG95 312 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 OR5M1Q8NGP8 315 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 ELP5Q8TE02 316 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 BTN2A2Q8WVV5 523 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 SNX19Q92543 992 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 C18orf25Q96B23 403 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-216ENST00000523088 S100PBPQ96BU1 408 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 LRRC37BQ96QE4 947 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 COPS4Q9BT78 406 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 VN1R3Q9BXE9 311 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 BTBD1Q9H0C5 482 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 SAP130Q9H0E3 1048 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 POMKQ9H5K3 350 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 COQ10BQ9H8M1 238 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 GLOD4Q9HC38 313 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 PPANQ9NQ55 473 aaKnown RBP7.31□□□□□ -1.24
HDAC3-216ENST00000523088 TREM2Q9NZC2 230 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 PEF1Q9UBV8 284 aaKnown RBP7.31□□□□□ -1.24
HDAC3-216ENST00000523088 MAGEL2Q9UJ55 1249 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 TSPAN16Q9UKR8 245 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 FZD10Q9ULW2 581 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 TLR6Q9Y2C9 796 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 MTO1Q9Y2Z2 717 aaKnown RBP7.31□□□□□ -1.24
HDAC3-216ENST00000523088 HES2Q9Y543 173 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 CEPT1Q9Y6K0 416 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 UBE4BO95155 1302 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 A0A1W2PRV1 198 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 TRABD2BA6NFA1 517 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 ANKDD1BA6NHY2 528 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 CBY3A6NI87 242 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 LEUTXA8MZ59 168 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 C2CD2LO14523 706 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 COCHO43405 550 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 SGCEO43556 437 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 CHP2O43745 196 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 XYLBO75191 536 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 BEST1O76090 585 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 HAUS5O94927 633 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 MLYCDO95822 493 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 GUSBP08236 651 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 H2AFB1P0C5Y9 115 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 TRAPPC2P0DI81 140 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 TRAPPC2BP0DI82 140 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 CSH1P0DML2 217 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 CSH2P0DML3 217 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 MBL2P11226 248 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-216ENST00000523088 CDH1P12830 882 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 PLS3P13797 630 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 NCF1P14598 390 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-216ENST00000523088 SPI1P17947 270 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 AKAP5P24588 427 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 ACVR2AP27037 513 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 RYKP34925 604 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 BUD31P41223 144 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-216ENST00000523088 GRM5P41594 1212 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 CEBPDP49716 269 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-216ENST00000523088 NDST1P52848 882 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 OR2B6P58173 313 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 ERVK-8P63133 956 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 NR1H3Q13133 447 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 DUSP8Q13202 625 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 TP53BP2Q13625 1128 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 PKP1Q13835 747 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 IL18Q14116 193 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 ARID5BQ14865 1188 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 ZNF169Q14929 603 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-216ENST00000523088 INAVAQ3KP66 663 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 UAP1L1Q3KQV9 507 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 ARMC12Q5T9G4 340 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 ZDHHC20Q5W0Z9 365 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 TTC27Q6P3X3 843 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 PGBD2Q6P3X8 592 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 MPZL3Q6UWV2 235 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 CERS6Q6ZMG9 384 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 USP53Q70EK8 1073 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 ERN2Q76MJ5 926 aaKnown RBP7.3□□□□□ -1.24
HDAC3-216ENST00000523088 TRMT11Q7Z4G4 463 aaKnown RBP7.3□□□□□ -1.24
HDAC3-216ENST00000523088 IGFN1Q86VF2 1251 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 LACC1Q8IV20 430 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 LIX1LQ8IVB5 337 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 FOXRED2Q8IWF2 684 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 EID3Q8N140 333 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 ARMC10Q8N2F6 343 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 GHDCQ8N2G8 530 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 BEND7Q8N7W2 519 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-216ENST00000523088 ATG16L2Q8NAA4 619 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 MFSD9Q8NBP5 474 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 KREMEN2Q8NCW0 462 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 CPEB3Q8NE35 698 aaKnown RBP7.3□□□□□ -1.24
HDAC3-216ENST00000523088 OR52J3Q8NH60 311 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 ZNF420Q8TAQ5 688 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms