RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 FEZF1A0PJY2 475 aa17.76■□□□□ 0.43
SPIDR-220ENST00000522900 E7ESA3 106 aa17.76■□□□□ 0.43
SPIDR-220ENST00000522900 LCMT2O60294 686 aaKnown RBP17.76■□□□□ 0.43
SPIDR-220ENST00000522900 PIAS1O75925 651 aa17.76■□□□□ 0.43
SPIDR-220ENST00000522900 NPPBP16860 134 aa17.76■□□□□ 0.43
SPIDR-220ENST00000522900 SAT1P21673 171 aa17.76■□□□□ 0.43
SPIDR-220ENST00000522900 DSG2Q14126 1118 aa17.76■□□□□ 0.43
SPIDR-220ENST00000522900 UBAP2LQ14157 1087 aaKnown RBP17.76■□□□□ 0.43
SPIDR-220ENST00000522900 FRG1Q14331 258 aaKnown RBP17.76■□□□□ 0.43
SPIDR-220ENST00000522900 TUBB8Q3ZCM7 444 aa17.76■□□□□ 0.43
SPIDR-220ENST00000522900 GARNL3Q5VVW2 1013 aa17.76■□□□□ 0.43
SPIDR-220ENST00000522900 ATG9BQ674R7 924 aa17.76■□□□□ 0.43
SPIDR-220ENST00000522900 FAM45BPQ6NSW5 357 aa17.76■□□□□ 0.43
SPIDR-220ENST00000522900 IGFL3Q6UXB1 125 aa17.76■□□□□ 0.43
SPIDR-220ENST00000522900 ATCAYQ86WG3 371 aa17.76■□□□□ 0.43
SPIDR-220ENST00000522900 HPS6Q86YV9 775 aa17.76■□□□□ 0.43
SPIDR-220ENST00000522900 AMER2Q8N7J2 671 aa17.76■□□□□ 0.43
SPIDR-220ENST00000522900 FAM45AQ8TCE6 357 aa17.76■□□□□ 0.43
SPIDR-220ENST00000522900 PYCR2Q96C36 320 aa17.76■□□□□ 0.43
SPIDR-220ENST00000522900 C19orf60Q96EN9 201 aa17.76■□□□□ 0.43
SPIDR-220ENST00000522900 DRC3Q9H069 523 aa17.76■□□□□ 0.43
SPIDR-220ENST00000522900 SLAMF7Q9NQ25 335 aa17.76■□□□□ 0.43
SPIDR-220ENST00000522900 MOCS1Q9NZB8 636 aa17.76■□□□□ 0.43
SPIDR-220ENST00000522900 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.76■□□□□ 0.43
SPIDR-220ENST00000522900 COL12A1Q99715 3063 aa17.76■□□□□ 0.43
SPIDR-220ENST00000522900 CLEC18AA5D8T8 446 aa17.75■□□□□ 0.43
SPIDR-220ENST00000522900 HIST1H2AGP0C0S8 130 aaPredicted RBP17.75■□□□□ 0.43
SPIDR-220ENST00000522900 CDH1P12830 882 aa17.75■□□□□ 0.43
SPIDR-220ENST00000522900 HIST1H2ADP20671 130 aa17.75■□□□□ 0.43
SPIDR-220ENST00000522900 GNLYP22749 145 aa17.75■□□□□ 0.43
SPIDR-220ENST00000522900 HRH2P25021 359 aa17.75■□□□□ 0.43
SPIDR-220ENST00000522900 BCL6P41182 706 aa17.75■□□□□ 0.43
SPIDR-220ENST00000522900 EMP2P54851 167 aa17.75■□□□□ 0.43
SPIDR-220ENST00000522900 MAT1AQ00266 395 aaKnown RBP17.75■□□□□ 0.43
SPIDR-220ENST00000522900 CLEC18BQ6UXF7 455 aa17.75■□□□□ 0.43
SPIDR-220ENST00000522900 PRSS41Q7RTY9 318 aa17.75■□□□□ 0.43
SPIDR-220ENST00000522900 STRA8Q7Z7C7 330 aa17.75■□□□□ 0.43
SPIDR-220ENST00000522900 ZC3HC1Q86WB0 502 aaKnown RBP17.75■□□□□ 0.43
SPIDR-220ENST00000522900 C17orf64Q86WR6 236 aa17.75■□□□□ 0.43
SPIDR-220ENST00000522900 EFCAB3Q8N7B9 438 aa17.75■□□□□ 0.43
SPIDR-220ENST00000522900 CLEC18CQ8NCF0 446 aa17.75■□□□□ 0.43
SPIDR-220ENST00000522900 SPATA4Q8NEY3 305 aa17.75■□□□□ 0.43
SPIDR-220ENST00000522900 MVB12AQ96EY5 273 aa17.75■□□□□ 0.43
SPIDR-220ENST00000522900 HIST1H2AHQ96KK5 128 aa17.75■□□□□ 0.43
SPIDR-220ENST00000522900 HIST1H2AJQ99878 128 aa17.75■□□□□ 0.43
SPIDR-220ENST00000522900 H2AFJQ9BTM1 129 aa17.75■□□□□ 0.43
SPIDR-220ENST00000522900 PCBD2Q9H0N5 130 aa17.75■□□□□ 0.43
SPIDR-220ENST00000522900 DPH5Q9H2P9 285 aa17.75■□□□□ 0.43
SPIDR-220ENST00000522900 SMYD2Q9NRG4 433 aa17.75■□□□□ 0.43
SPIDR-220ENST00000522900 ARL15Q9NXU5 204 aa17.75■□□□□ 0.43
SPIDR-220ENST00000522900 ZFATQ9P243 1243 aa17.75■□□□□ 0.43
SPIDR-220ENST00000522900 CORO1CQ9ULV4 474 aaPredicted RBP17.75■□□□□ 0.43
SPIDR-220ENST00000522900 CSAG2Q9Y5P2 127 aa17.75■□□□□ 0.43
SPIDR-220ENST00000522900 PCM1Q15154 2024 aa17.75■□□□□ 0.43
SPIDR-220ENST00000522900 SPENQ96T58 3664 aaKnown RBP17.75■□□□□ 0.43
SPIDR-220ENST00000522900 KCNE1BA0A087WTH5 132 aa17.74■□□□□ 0.43
SPIDR-220ENST00000522900 CYSRT1A8MQ03 144 aa17.74■□□□□ 0.43
SPIDR-220ENST00000522900 IDSB3KWA1 339 aa17.74■□□□□ 0.43
SPIDR-220ENST00000522900 TXNDC9O14530 226 aa17.74■□□□□ 0.43
SPIDR-220ENST00000522900 VPS4BO75351 444 aa17.74■□□□□ 0.43
SPIDR-220ENST00000522900 ALPPP05187 535 aa17.74■□□□□ 0.43
SPIDR-220ENST00000522900 EFNA3P52797 238 aa17.74■□□□□ 0.43
SPIDR-220ENST00000522900 RPS15AP62244 130 aaKnown RBP17.74■□□□□ 0.43
SPIDR-220ENST00000522900 C2orf54Q08AI8 447 aa17.74■□□□□ 0.43
SPIDR-220ENST00000522900 CBLBQ13191 982 aa17.74■□□□□ 0.43
SPIDR-220ENST00000522900 ZNF460Q14592 562 aa17.74■□□□□ 0.43
SPIDR-220ENST00000522900 FAAH2Q6GMR7 532 aa17.74■□□□□ 0.43
SPIDR-220ENST00000522900 LCTLQ6UWM7 567 aa17.74■□□□□ 0.43
SPIDR-220ENST00000522900 CAPN12Q6ZSI9 719 aa17.74■□□□□ 0.43
SPIDR-220ENST00000522900 ZBED8Q8IZ13 594 aa17.74■□□□□ 0.43
SPIDR-220ENST00000522900 OR9A4Q8NGU2 314 aa17.74■□□□□ 0.43
SPIDR-220ENST00000522900 OR56A3Q8NH54 315 aa17.74■□□□□ 0.43
SPIDR-220ENST00000522900 TM4SF19Q96DZ7 209 aa17.74■□□□□ 0.43
SPIDR-220ENST00000522900 OR4K3Q96R72 315 aa17.74■□□□□ 0.43
SPIDR-220ENST00000522900 ZNF160Q9HCG1 818 aa17.74■□□□□ 0.43
SPIDR-220ENST00000522900 VPS4AQ9UN37 437 aa17.74■□□□□ 0.43
SPIDR-220ENST00000522900 B3GNT3Q9Y2A9 372 aa17.74■□□□□ 0.43
SPIDR-220ENST00000522900 CDC7O00311 574 aa17.73■□□□□ 0.43
SPIDR-220ENST00000522900 PRPF4O43172 522 aaKnown RBP eCLIP17.73■□□□□ 0.431e-8■■■■■ 32.2
SPIDR-220ENST00000522900 RAD51CO43502 376 aa17.73■□□□□ 0.43
SPIDR-220ENST00000522900 JRKO75564 520 aa17.73■□□□□ 0.43
SPIDR-220ENST00000522900 GUCA1CO95843 209 aa17.73■□□□□ 0.43
SPIDR-220ENST00000522900 ANXA5P08758 320 aa17.73■□□□□ 0.43
SPIDR-220ENST00000522900 ACPPP15309 386 aa17.73■□□□□ 0.43
SPIDR-220ENST00000522900 TAS2R39P59534 338 aa17.73■□□□□ 0.43
SPIDR-220ENST00000522900 MEF2AQ02078 507 aaPredicted RBP17.73■□□□□ 0.43
SPIDR-220ENST00000522900 FAM53BQ14153 422 aa17.73■□□□□ 0.43
SPIDR-220ENST00000522900 DUPD1Q68J44 220 aa17.73■□□□□ 0.43
SPIDR-220ENST00000522900 CAPN13Q6MZZ7 669 aaPredicted RBP17.73■□□□□ 0.43
SPIDR-220ENST00000522900 SBSNQ6UWP8 590 aa17.73■□□□□ 0.43
SPIDR-220ENST00000522900 ZC3H7AQ8IWR0 971 aaKnown RBP17.73■□□□□ 0.43
SPIDR-220ENST00000522900 ZADH2Q8N4Q0 377 aa17.73■□□□□ 0.43
SPIDR-220ENST00000522900 CISD2Q8N5K1 135 aaKnown RBP17.73■□□□□ 0.43
SPIDR-220ENST00000522900 KCT2Q8NC54 265 aa17.73■□□□□ 0.43
SPIDR-220ENST00000522900 GALNT11Q8NCW6 608 aa17.73■□□□□ 0.43
SPIDR-220ENST00000522900 SNRNP40Q96DI7 357 aaKnown RBP17.73■□□□□ 0.43
SPIDR-220ENST00000522900 PDLIM5Q96HC4 596 aaKnown RBP17.73■□□□□ 0.43
SPIDR-220ENST00000522900 THOC3Q96J01 351 aaKnown RBP17.73■□□□□ 0.43
SPIDR-220ENST00000522900 ERP44Q9BS26 406 aa17.73■□□□□ 0.43
SPIDR-220ENST00000522900 TGIF2Q9GZN2 237 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms