RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 BNIP3Q12983 259 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 TRAF3Q13114 568 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 PDGFRLQ15198 375 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 ZIK1Q3SY52 487 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 SETMARQ53H47 684 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 ZNF691Q5VV52 312 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 NADSYN1Q6IA69 706 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 SHQ1Q6PI26 577 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 BRICD5Q6PL45 260 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 SPESP1Q6UW49 350 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 UNQ6494/PRO21346Q6UXR6 183 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 LRRC70Q7Z2Q7 622 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 CYP2U1Q7Z449 544 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 TRIM46Q7Z4K8 759 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 CAMKK1Q8N5S9 505 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 ZBTB2Q8N680 514 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 PAF1Q8N7H5 531 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 ARL10Q8N8L6 244 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 OR7D4Q8NG98 312 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 SH3RF2Q8TEC5 729 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 EEF1AKMT1Q8WVE0 214 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 IPCEF1Q8WWN9 437 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 RLN3Q8WXF3 142 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 SNX19Q92543 992 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 PIGKQ92643 395 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 MYO19Q96H55 970 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 REXO5Q96IC2 774 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 TEX37Q96LM6 180 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 MBOAT4Q96T53 435 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 ACOX2Q99424 681 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 TTLL2Q9BWV7 592 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 LINC00597Q9H2U6 94 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 TRIT1Q9H3H1 467 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 CLMPQ9H6B4 373 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 NTN4Q9HB63 628 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 RDH14Q9HBH5 336 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 C1orf109Q9NX04 203 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 KIF17Q9P2E2 1029 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 DAPK2Q9UIK4 370 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 ZMIZ1Q9ULJ6 1067 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 SNX6Q9UNH7 406 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 CORO2BQ9UQ03 480 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 MAN2B2Q9Y2E5 1009 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 MED16Q9Y2X0 877 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 PCDHGB1Q9Y5G3 927 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 PCDHGA5Q9Y5G8 931 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 DENND4CQ5VZ89 1909 aa8.38□□□□□ -1.07
CTNNA1-223ENST00000520520 USP24Q9UPU5 2620 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 SPEGQ15772 3267 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 CCDC163A0A0D9SF12 145 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 C1orf232A0A0U1RR37 186 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 LOC100130705A0A1B0GUX0 176 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 FUOMA2VDF0 154 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 UPK1AO00322 258 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 OR7A17O14581 309 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 KHNYNO15037 678 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 ANKRD28O15084 1053 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 PRMT3O60678 531 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 NDUFS2O75306 463 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 SULT1C4O75897 302 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 GABARAPO95166 117 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 CCNDBP1O95273 360 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 MT-ND1P03886 318 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 PGRP06401 933 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 PROS1P07225 676 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 PPIBP23284 216 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 IL12AP29459 219 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 PRDX3P30048 256 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 WEE1P30291 646 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 S100A3P33764 101 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 HTR6P50406 440 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 ST13P50502 369 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 HK3P52790 923 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 PLA2G16P53816 162 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 RHOAP61586 193 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 RPS14P62263 151 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 IL5RAQ01344 420 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 KCNC4Q03721 635 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 RELAQ04206 551 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 VAC14Q08AM6 782 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 KCNAB2Q13303 367 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 ATP1A4Q13733 1029 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 IHHQ14623 411 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 PTPRCAPQ14761 206 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 ZNF77Q15935 545 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 EML3Q32P44 896 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 FAM174BQ3ZCQ3 159 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 GPR33Q49SQ1 333 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 GGTA1PQ4G0N0 100 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 USP39Q53GS9 565 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 INO80DQ53TQ3 878 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 RUNDC3AQ59EK9 446 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 HECTD3Q5T447 861 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 ARMC12Q5T9G4 340 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 XAF1Q6GPH4 301 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 DUS1LQ6P1R4 473 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 NCEH1Q6PIU2 408 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 SCIMPQ6UWF3 145 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 SBSNQ6UWP8 590 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 Q6ZSR9 355 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms