RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 KLHDC2Q9Y2U9 406 aa0.17□□□□□ -2.38
RNU6-1049P-201ENST00000516414 NSG2Q9Y328 171 aa0.17□□□□□ -2.38
RNU6-1049P-201ENST00000516414 MRPS18CQ9Y3D5 142 aaKnown RBP0.17□□□□□ -2.38
RNU6-1049P-201ENST00000516414 KIF25-AS1Q9Y6Z4 181 aa0.17□□□□□ -2.38
RNU6-1049P-201ENST00000516414 FBN3Q75N90 2809 aa0.17□□□□□ -2.38
RNU6-1049P-201ENST00000516414 METP08581 1390 aa0.17□□□□□ -2.38
RNU6-1049P-201ENST00000516414 MUC16Q8WXI7 14507 aa0.17□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ATRXP46100 2492 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 SHANK1Q9Y566 2161 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ZNF541Q9H0D2 1346 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 FRMPD3Q5JV73 1810 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 A0A087WZ39 114 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 GPR75-ASB3A0A0A6YYF3 556 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 TRGV8A0A0C4DH27 118 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 A0A0G2JLW4 131 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 GOLGA6L10A0A0M3HER8 536 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 A0A1B0GTH9 108 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 A0A1B0GVC2 190 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 A0A1W2PPQ1 181 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 PI4KAP2A4QPH2 592 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 NEMP2A6NFY4 417 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ZSCAN5CA6NGD5 496 aaPredicted RBP0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 GAGE10A6NGK3 116 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ASB14A6NK59 587 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ZNF724A8MTY0 619 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 A8MZ25 164 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 KLLNB2CW77 178 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 B4DXG7 233 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 C11orf94C9JXX5 98 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 J3KRW8 73 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 TSPAN4O14817 238 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 NDUFS4O43181 175 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 TPD52L2O43399 206 aaKnown RBP0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 DCXO43602 365 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 AIREO43918 545 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 HS6ST1O60243 411 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 DFNA5O60443 496 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 FOXH1O75593 365 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 DFFBO76075 338 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 NOL4O94818 638 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 MBD4O95243 580 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 IGHV2-70P01814 119 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 RPLP0P05388 317 aaKnown RBP0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CLEC3BP05452 202 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CSN3P07498 182 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 NUDT17P0C025 328 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 SBK2P0C263 348 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CCDC159P0C7I6 412 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 OR2T7P0C7T2 308 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 P0C879 139 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 STAG3L1P0CL83 205 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 PCP11498 1178 aaKnown RBP0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 FDPSP14324 419 aaKnown RBP0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CAPN3P20807 821 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 FUT3P21217 361 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 GPTP24298 496 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 AXLP30530 894 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 SRD5A2P31213 254 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CSTF2P33240 577 aaKnown RBP eCLIP0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 BTCP35070 178 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 MDH2P40926 338 aaKnown RBP0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 MAGEB1P43366 347 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 OR3A4PP47883 348 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 HOXA1P49639 335 aaPredicted RBP0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 PAPOLAP51003 745 aaKnown RBP0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 NAP1L1P55209 391 aaKnown RBP0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CLDN15P56746 228 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 STARD6P59095 220 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 KRTAP12-4P60329 112 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 DCAF7P61962 342 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 FKBP1BP68106 108 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 UBXN2AP68543 259 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CXCL6P80162 114 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 IGLV3-21P80748 117 aaPredicted RBP0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 FKBP3Q00688 224 aaKnown RBP0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 SETQ01105 290 aaPredicted RBP0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 GOLGA8FQ08AF8 430 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 NIPAL4Q0D2K0 466 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 TRAF2Q12933 501 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CAMK2DQ13557 499 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 KRT33BQ14525 404 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 TOMM20Q15388 145 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 RSPO1Q2MKA7 263 aaPredicted RBP0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 DPCR1Q3MIW9 517 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ACCSLQ4AC99 568 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 DUSP28Q4G0W2 176 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 SOWAHCQ53LP3 525 aaPredicted RBP0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 C2orf83Q53S99 150 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 HSP90AB2PQ58FF8 381 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 RAB41Q5JT25 222 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 TCTE1Q5JU00 501 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 SPANXN4Q5MJ08 99 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 TEX35Q5T0J7 233 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 RARS2Q5T160 578 aaKnown RBP0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ATAD3CQ5T2N8 411 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 FHL5Q5TD97 284 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ZNF691Q5VV52 312 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 WDR25Q64LD2 544 aaPredicted RBP0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ZSCAN25Q6NSZ9 544 aa0.16□□□□□ -2.38
RNU6-1049P-201ENST00000516414 PDXDC1Q6P996 788 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms