RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 ZNF354BQ96LW1 612 aa2.96□□□□□ -1.94
HERC4-215ENST00000515753 RUNDC3BQ96NL0 473 aa2.96□□□□□ -1.94
HERC4-215ENST00000515753 MS4A10Q96PG2 267 aa2.96□□□□□ -1.94
HERC4-215ENST00000515753 TSGA13Q96PP4 275 aa2.96□□□□□ -1.94
HERC4-215ENST00000515753 LITAFQ99732 161 aa2.96□□□□□ -1.94
HERC4-215ENST00000515753 ZNF350Q9GZX5 532 aa2.96□□□□□ -1.94
HERC4-215ENST00000515753 GOLPH3LQ9H4A5 285 aa2.96□□□□□ -1.94
HERC4-215ENST00000515753 RAD21L1Q9H4I0 556 aa2.96□□□□□ -1.94
HERC4-215ENST00000515753 TMEM206Q9H813 350 aa2.96□□□□□ -1.94
HERC4-215ENST00000515753 ANO10Q9NW15 660 aa2.96□□□□□ -1.94
HERC4-215ENST00000515753 CNIH4Q9P003 139 aa2.96□□□□□ -1.94
HERC4-215ENST00000515753 SLC24A2Q9UI40 661 aa2.96□□□□□ -1.94
HERC4-215ENST00000515753 APPL1Q9UKG1 709 aa2.96□□□□□ -1.94
HERC4-215ENST00000515753 ITGA11Q9UKX5 1188 aa2.96□□□□□ -1.94
HERC4-215ENST00000515753 BLOC1S6Q9UL45 172 aa2.96□□□□□ -1.94
HERC4-215ENST00000515753 B3GALT5Q9Y2C3 310 aa2.96□□□□□ -1.94
HERC4-215ENST00000515753 TRPM2O94759 1503 aa2.96□□□□□ -1.94
HERC4-215ENST00000515753 AHDC1Q5TGY3 1603 aaPredicted RBP2.96□□□□□ -1.94
HERC4-215ENST00000515753 POLR1AO95602 1720 aaPredicted RBP2.96□□□□□ -1.94
HERC4-215ENST00000515753 KIAA1210Q9ULL0 1709 aa2.96□□□□□ -1.94
HERC4-215ENST00000515753 C1orf167Q5SNV9 1468 aa2.96□□□□□ -1.94
HERC4-215ENST00000515753 TEX13DA0A0J9YY54 714 aaPredicted RBP2.95□□□□□ -1.94
HERC4-215ENST00000515753 TMEM189-UBE2V1I3L0A0 370 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 J3QR06 171 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 GPR137BO60478 399 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 HMMRO75330 724 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 STAM2O75886 525 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 ZWINTO95229 277 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 BMP10O95393 424 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 LIPFP07098 398 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 PATE4P0C8F1 98 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 RNF224P0DH78 156 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 HMGB2P26583 209 aaKnown RBP2.95□□□□□ -1.94
HERC4-215ENST00000515753 CDH13P55290 713 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 KIAA1024LP59773 190 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 ST8SIA6P61647 398 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 ACSM1Q08AH1 577 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 UBE2V1Q13404 147 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 NR1D2Q14995 579 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 RPS6KA1Q15418 735 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 UGCGQ16739 394 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 VWC2Q2TAL6 325 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 ZNF876PQ49A33 203 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 SLC39A12Q504Y0 691 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 FAM98BQ52LJ0 330 aaKnown RBP2.95□□□□□ -1.94
HERC4-215ENST00000515753 ETFRF1Q6IPR1 90 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 FAM198BQ6UWH4 519 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 ANO5Q75V66 913 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 TRPT1Q86TN4 253 aaKnown RBP2.95□□□□□ -1.94
HERC4-215ENST00000515753 PTOV1Q86YD1 416 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 KRTAP7-1Q8IUC3 87 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 CLYBLQ8N0X4 340 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 STPG4Q8N801 248 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 MRPL43Q8N983 215 aaKnown RBP2.95□□□□□ -1.94
HERC4-215ENST00000515753 L3MBTL4Q8NA19 623 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 EXD1Q8NHP7 514 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 FCAMRQ8WWV6 532 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 TSPAN18Q96SJ8 248 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 PARK7Q99497 189 aaKnown RBP2.95□□□□□ -1.94
HERC4-215ENST00000515753 BARHL1Q9BZE3 327 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 PPIL3Q9H2H8 161 aaKnown RBP2.95□□□□□ -1.94
HERC4-215ENST00000515753 TRPC7Q9HCX4 862 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 CHMP1AQ9HD42 196 aaPredicted RBP2.95□□□□□ -1.94
HERC4-215ENST00000515753 EQTNQ9NQ60 294 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 DNAJC17Q9NVM6 304 aaKnown RBP2.95□□□□□ -1.94
HERC4-215ENST00000515753 COMMD8Q9NX08 183 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 SEPT10Q9P0V9 454 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 STK26Q9P289 416 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 CHKBQ9Y259 395 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 UBR1Q8IWV7 1749 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 ARHGEF10O15013 1369 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 METP08581 1390 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 EIF3AQ14152 1382 aaKnown RBP2.95□□□□□ -1.94
HERC4-215ENST00000515753 ABCC11Q96J66 1382 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 ANKRD30BQ9BXX2 1392 aa2.95□□□□□ -1.94
HERC4-215ENST00000515753 CCDC144AA2RUR9 1427 aa2.94□□□□□ -1.94
HERC4-215ENST00000515753 RGS12O14924 1447 aa2.94□□□□□ -1.94
HERC4-215ENST00000515753 ASXL1Q8IXJ9 1541 aa2.94□□□□□ -1.94
HERC4-215ENST00000515753 PIK3C2BO00750 1634 aa2.94□□□□□ -1.94
HERC4-215ENST00000515753 LRP6O75581 1613 aa2.94□□□□□ -1.94
HERC4-215ENST00000515753 PTPN23Q9H3S7 1636 aa2.94□□□□□ -1.94
HERC4-215ENST00000515753 YDJCA8MPS7 323 aa2.94□□□□□ -1.94
HERC4-215ENST00000515753 PLK4O00444 970 aa2.94□□□□□ -1.94
HERC4-215ENST00000515753 PLOD2O00469 737 aa2.94□□□□□ -1.94
HERC4-215ENST00000515753 ZBTB43O43298 467 aa2.94□□□□□ -1.94
HERC4-215ENST00000515753 CREG1O75629 220 aa2.94□□□□□ -1.94
HERC4-215ENST00000515753 GUCA1CO95843 209 aa2.94□□□□□ -1.94
HERC4-215ENST00000515753 IGHDP01880 384 aa2.94□□□□□ -1.94
HERC4-215ENST00000515753 OR52Z1P0C646 297 aa2.94□□□□□ -1.94
HERC4-215ENST00000515753 UROSP10746 265 aa2.94□□□□□ -1.94
HERC4-215ENST00000515753 LIFP15018 202 aa2.94□□□□□ -1.94
HERC4-215ENST00000515753 MSH3P20585 1137 aa2.94□□□□□ -1.94
HERC4-215ENST00000515753 GPC3P51654 580 aa2.94□□□□□ -1.94
HERC4-215ENST00000515753 YBEYP58557 167 aaPredicted RBP2.94□□□□□ -1.94
HERC4-215ENST00000515753 MZT1Q08AG7 82 aa2.94□□□□□ -1.94
HERC4-215ENST00000515753 MDH1BQ5I0G3 518 aa2.94□□□□□ -1.94
HERC4-215ENST00000515753 SPOUT1Q5T280 376 aaKnown RBP2.94□□□□□ -1.94
HERC4-215ENST00000515753 NDUFAF5Q5TEU4 345 aa2.94□□□□□ -1.94
HERC4-215ENST00000515753 ARHGAP11AQ6P4F7 1023 aa2.94□□□□□ -1.94
HERC4-215ENST00000515753 TEX38Q6PEX7 206 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms