RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 C22orf31O95567 290 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 IGHV2-70P01814 119 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 RAB40ALP0C0E4 278 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 MYBL1P10243 752 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 IL11P20809 199 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 BDNFP23560 247 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 RBMS1P29558 406 aaKnown RBP3.21□□□□□ -1.9
LINC01088-211ENST00000515597 CSNK2BP67870 215 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 GCNT1Q02742 428 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 PTPRCAPQ14761 206 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 CA9Q16790 459 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 ARMC4Q5T2S8 1044 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 LCN1P1Q5VSP4 162 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 KRT39Q6A163 491 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 G2E3Q7L622 706 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 ARHGAP22Q7Z5H3 698 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 TMPRSS11BQ86T26 416 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 IQCHQ86VS3 1027 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 MAML2Q8IZL2 1156 aaPredicted RBP3.21□□□□□ -1.9
LINC01088-211ENST00000515597 GPRC5AQ8NFJ5 357 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 MAPK15Q8TD08 544 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 PRICKLE1Q96MT3 831 aaPredicted RBP3.21□□□□□ -1.9
LINC01088-211ENST00000515597 TRIM6Q9C030 488 aaPredicted RBP3.21□□□□□ -1.9
LINC01088-211ENST00000515597 GPR88Q9GZN0 384 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 FAM49AQ9H0Q0 323 aaPredicted RBP3.21□□□□□ -1.9
LINC01088-211ENST00000515597 CNOT10Q9H9A5 744 aaKnown RBP3.21□□□□□ -1.9
LINC01088-211ENST00000515597 TRPV4Q9HBA0 871 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 SPHK2Q9NRA0 654 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 ANKEF1Q9NU02 776 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 PRMT7Q9NVM4 692 aaPredicted RBP3.21□□□□□ -1.9
LINC01088-211ENST00000515597 NKIRAS2Q9NYR9 191 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 BCCIPQ9P287 314 aaKnown RBP eCLIP3.21□□□□□ -1.9
LINC01088-211ENST00000515597 THEGQ9P2T0 379 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.21□□□□□ -1.9
LINC01088-211ENST00000515597 TNNQ9UQP3 1299 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 ATRXP46100 2492 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 MLH3Q9UHC1 1453 aa3.21□□□□□ -1.9
LINC01088-211ENST00000515597 ADGBQ8N7X0 1667 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 KIF27Q86VH2 1401 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 CNTLNQ9NXG0 1405 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 DEPDC5O75140 1603 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 A0A1W2PPQ1 181 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 A0A1W2PR80 420 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 NEMP2A6NFY4 417 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 EPHB6O15197 1021 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 P4HA2O15460 535 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 SMIM18P0DKX4 95 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 HAPLN1P10915 354 aaPredicted RBP3.2□□□□□ -1.9
LINC01088-211ENST00000515597 SLC2A2P11168 524 aaPredicted RBP3.2□□□□□ -1.9
LINC01088-211ENST00000515597 PTPN3P26045 913 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 PTGER3P43115 390 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 PGFP49763 221 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 ASCL1P50553 236 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 ALDH3A2P51648 485 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 MS4A2Q01362 244 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 NUCB1Q02818 461 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 KLC1Q07866 573 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 RALGDSQ12967 914 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 LY6DQ14210 128 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 UGT3A2Q3SY77 523 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 CRY2Q49AN0 593 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 SLC35D3Q5M8T2 416 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 ERMARDQ5T6L9 678 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 KRT80Q6KB66 452 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 PRR27Q6MZM9 219 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 UGT3A1Q6NUS8 523 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 SLC30A6Q6NXT4 461 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 CENPVQ7Z7K6 275 aaPredicted RBP3.2□□□□□ -1.9
LINC01088-211ENST00000515597 THAP8Q8NA92 274 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 Q8NBF4 154 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 KCTD6Q8NC69 237 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 OR6S1Q8NH40 331 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 MOB3AQ96BX8 217 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 HDAC11Q96DB2 347 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 THOC1Q96FV9 657 aaKnown RBP3.2□□□□□ -1.9
LINC01088-211ENST00000515597 ZNF486Q96H40 463 aaPredicted RBP3.2□□□□□ -1.9
LINC01088-211ENST00000515597 FAM20AQ96MK3 541 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 MTMR12Q9C0I1 747 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 PANK3Q9H999 370 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 MAN1B1Q9UKM7 699 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 SYNMO15061 1565 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 MAST1Q9Y2H9 1570 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 IQGAP1P46940 1657 aa3.2□□□□□ -1.9
LINC01088-211ENST00000515597 ARID2Q68CP9 1835 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 A8MU10 97 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 PSMD10O75832 226 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 ADRB2P07550 413 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 CAPN2P17655 700 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 PRKACGP22612 351 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 JAK1P23458 1154 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 MPZP25189 248 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 EEF1DP29692 281 aaKnown RBP3.19□□□□□ -1.9
LINC01088-211ENST00000515597 HLA-FP30511 346 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 CSTF2P33240 577 aaKnown RBP eCLIP3.19□□□□□ -1.9
LINC01088-211ENST00000515597 RAB28P51157 221 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 MAPK12P53778 367 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 TMEM50BP56557 158 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 EFTUD2Q15029 972 aaKnown RBP eCLIP3.19□□□□□ -1.9
LINC01088-211ENST00000515597 PHKG1Q16816 387 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 VWC2Q2TAL6 325 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms