RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 Q6ZS92 163 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 NDUFAF7Q7L592 441 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 GALNT7Q86SF2 657 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 PLD3Q8IV08 490 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 SPNS2Q8IVW8 549 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 CAMKVQ8NCB2 501 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 DNAJB14Q8TBM8 379 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 FAM45AQ8TCE6 357 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 PPP4R1Q8TF05 950 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 C8orf44Q96CB5 159 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 SNRNP40Q96DI7 357 aaKnown RBP12.99□□□□□ -0.33
TCOF1-215ENST00000515516 SNF8Q96H20 258 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 HAUS8Q9BT25 410 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 ATG10Q9H0Y0 220 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 ZBTB20Q9HC78 741 aaPredicted RBP12.99□□□□□ -0.33
TCOF1-215ENST00000515516 AGPAT4Q9NRZ5 378 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 ADAMTS6Q9UKP5 1117 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 CHMP2BQ9UQN3 213 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 VWA7Q9Y334 891 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 KCNE1BA0A087WTH5 132 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 BLACEA4D250 179 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 H0YIG0 161 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 FFAR3O14843 346 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 GPR42O15529 346 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 GP1BBP13224 206 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 FDXRP22570 491 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 IVDP26440 423 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 GABRB3P28472 473 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 ITGA8P53708 1063 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 AP2B1P63010 937 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 SRSF1Q07955 248 aaKnown RBP eCLIP12.98□□□□□ -0.33
TCOF1-215ENST00000515516 MFSD4BQ5TF39 518 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 HECTD2Q5U5R9 776 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 ATG9BQ674R7 924 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 FAAH2Q6GMR7 532 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 HIBCHQ6NVY1 386 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-215ENST00000515516 LAPTM4BQ86VI4 370 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 CREG2Q8IUH2 290 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 IGDCC3Q8IVU1 814 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 TBC1D19Q8N5T2 526 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 PRR7Q8TB68 274 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 METTL21AQ8WXB1 218 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 ATL1Q8WXF7 558 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 C19orf60Q96EN9 201 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 CNDP1Q96KN2 507 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 LMF1Q96S06 567 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 FAM129AQ9BZQ8 928 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 TRIM31Q9BZY9 425 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 TGIF2Q9GZN2 237 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 ASF1BQ9NVP2 202 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 ARL15Q9NXU5 204 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 RNF14Q9UBS8 474 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 MKL2Q9ULH7 1088 aa12.98□□□□□ -0.33
TCOF1-215ENST00000515516 USP27XA6NNY8 438 aa12.97□□□□□ -0.33
TCOF1-215ENST00000515516 P2RX6O15547 441 aa12.97□□□□□ -0.33
TCOF1-215ENST00000515516 TTI1O43156 1089 aa12.97□□□□□ -0.33
TCOF1-215ENST00000515516 FOXS1O43638 330 aa12.97□□□□□ -0.33
TCOF1-215ENST00000515516 WFS1O76024 890 aa12.97□□□□□ -0.33
TCOF1-215ENST00000515516 STATHP02808 62 aa12.97□□□□□ -0.33
TCOF1-215ENST00000515516 ICAM2P13598 275 aa12.97□□□□□ -0.33
TCOF1-215ENST00000515516 AP1S2P56377 157 aa12.97□□□□□ -0.33
TCOF1-215ENST00000515516 CSNK1G2P78368 415 aa12.97□□□□□ -0.33
TCOF1-215ENST00000515516 TIAL1Q01085 375 aaKnown RBP eCLIP12.97□□□□□ -0.33
TCOF1-215ENST00000515516 EEF1A2Q05639 463 aaKnown RBP12.97□□□□□ -0.33
TCOF1-215ENST00000515516 MRPL49Q13405 166 aaKnown RBP12.97□□□□□ -0.33
TCOF1-215ENST00000515516 TLR1Q15399 786 aa12.97□□□□□ -0.33
TCOF1-215ENST00000515516 NR6A1Q15406 480 aa12.97□□□□□ -0.33
TCOF1-215ENST00000515516 EIF2S3LQ2VIR3 472 aaKnown RBP12.97□□□□□ -0.33
TCOF1-215ENST00000515516 CRB2Q5IJ48 1285 aa12.97□□□□□ -0.33
TCOF1-215ENST00000515516 DUPD1Q68J44 220 aa12.97□□□□□ -0.33
TCOF1-215ENST00000515516 LCTLQ6UWM7 567 aa12.97□□□□□ -0.33
TCOF1-215ENST00000515516 IGFL2Q6UWQ7 119 aa12.97□□□□□ -0.33
TCOF1-215ENST00000515516 MBOAT1Q6ZNC8 495 aa12.97□□□□□ -0.33
TCOF1-215ENST00000515516 LINC00696Q6ZRV3 163 aa12.97□□□□□ -0.33
TCOF1-215ENST00000515516 CUZD1Q86UP6 607 aa12.97□□□□□ -0.33
TCOF1-215ENST00000515516 ANKMY2Q8IV38 441 aa12.97□□□□□ -0.33
TCOF1-215ENST00000515516 AMER3Q8N944 861 aa12.97□□□□□ -0.33
TCOF1-215ENST00000515516 BBOF1Q8ND07 529 aa12.97□□□□□ -0.33
TCOF1-215ENST00000515516 PWWP2AQ96N64 755 aa12.97□□□□□ -0.33
TCOF1-215ENST00000515516 TRIM51Q9BSJ1 452 aa12.97□□□□□ -0.33
TCOF1-215ENST00000515516 ANKHQ9HCJ1 492 aa12.97□□□□□ -0.33
TCOF1-215ENST00000515516 RIC8BQ9NVN3 520 aa12.97□□□□□ -0.33
TCOF1-215ENST00000515516 ZFATQ9P243 1243 aa12.97□□□□□ -0.33
TCOF1-215ENST00000515516 PCDHGA10Q9Y5H3 936 aa12.97□□□□□ -0.33
TCOF1-215ENST00000515516 SEC16AO15027 2179 aa12.96□□□□□ -0.33
TCOF1-215ENST00000515516 FEZF1A0PJY2 475 aa12.96□□□□□ -0.33
TCOF1-215ENST00000515516 DYTNA2CJ06 578 aa12.96□□□□□ -0.33
TCOF1-215ENST00000515516 EFCAB8A8MWE9 144 aa12.96□□□□□ -0.33
TCOF1-215ENST00000515516 NSA2O95478 260 aaKnown RBP12.96□□□□□ -0.33
TCOF1-215ENST00000515516 SERPINA7P05543 415 aa12.96□□□□□ -0.33
TCOF1-215ENST00000515516 ENO2P09104 434 aaPredicted RBP12.96□□□□□ -0.33
TCOF1-215ENST00000515516 SLC35G6P0C7Q6 338 aa12.96□□□□□ -0.33
TCOF1-215ENST00000515516 COX6A1P12074 109 aa12.96□□□□□ -0.33
TCOF1-215ENST00000515516 CDH1P12830 882 aa12.96□□□□□ -0.33
TCOF1-215ENST00000515516 SAT1P21673 171 aa12.96□□□□□ -0.33
TCOF1-215ENST00000515516 CCR8P51685 355 aa12.96□□□□□ -0.33
TCOF1-215ENST00000515516 ARG2P78540 354 aa12.96□□□□□ -0.33
TCOF1-215ENST00000515516 MAT1AQ00266 395 aaKnown RBP12.96□□□□□ -0.33
TCOF1-215ENST00000515516 MGAT5Q09328 741 aa12.96□□□□□ -0.33
TCOF1-215ENST00000515516 Q0VFX4 171 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms