RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 CCNDBP1O95273 360 aa14.89□□□□□ -0.03
LMNA-223ENST00000515459 IFNB1P01574 187 aa14.89□□□□□ -0.03
LMNA-223ENST00000515459 ATP5DP30049 168 aa14.89□□□□□ -0.03
LMNA-223ENST00000515459 RELAQ04206 551 aa14.89□□□□□ -0.03
LMNA-223ENST00000515459 TUBA3CQ13748 450 aa14.89□□□□□ -0.03
LMNA-223ENST00000515459 ARHGAP19Q14CB8 494 aa14.89□□□□□ -0.03
LMNA-223ENST00000515459 MEP1AQ16819 746 aa14.89□□□□□ -0.03
LMNA-223ENST00000515459 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.89□□□□□ -0.03
LMNA-223ENST00000515459 CTSL3PQ5NE16 218 aa14.89□□□□□ -0.03
LMNA-223ENST00000515459 FCRLBQ6BAA4 426 aa14.89□□□□□ -0.03
LMNA-223ENST00000515459 TUBA3EQ6PEY2 450 aa14.89□□□□□ -0.03
LMNA-223ENST00000515459 LANCL3Q6ZV70 420 aa14.89□□□□□ -0.03
LMNA-223ENST00000515459 MDS2Q8NDY4 140 aa14.89□□□□□ -0.03
LMNA-223ENST00000515459 ATG4AQ8WYN0 398 aa14.89□□□□□ -0.03
LMNA-223ENST00000515459 SIGLEC12Q96PQ1 595 aa14.89□□□□□ -0.03
LMNA-223ENST00000515459 CYTH2Q99418 400 aa14.89□□□□□ -0.03
LMNA-223ENST00000515459 UTP23Q9BRU9 249 aaKnown RBP14.89□□□□□ -0.03
LMNA-223ENST00000515459 LACRTQ9GZZ8 138 aa14.89□□□□□ -0.03
LMNA-223ENST00000515459 TSPAN10Q9H1Z9 355 aaPredicted RBP14.89□□□□□ -0.03
LMNA-223ENST00000515459 KLHL1Q9NR64 748 aa14.89□□□□□ -0.03
LMNA-223ENST00000515459 RAB6BQ9NRW1 208 aa14.89□□□□□ -0.03
LMNA-223ENST00000515459 PCYOX1Q9UHG3 505 aa14.89□□□□□ -0.03
LMNA-223ENST00000515459 PACSIN2Q9UNF0 486 aaPredicted RBP14.89□□□□□ -0.03
LMNA-223ENST00000515459 ASPDHA6ND91 283 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 SOWAHDA6NJG2 315 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 ZNF839A8K0R7 811 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 ARHGEF33A8MVX0 844 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 NPIPA5E9PKD4 350 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 H0YIG0 161 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 MYO1CO00159 1063 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 P2RX6O15547 441 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 APRTP07741 180 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 CD46P15529 392 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 ABOP16442 354 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 HSD17B2P37059 387 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 CD96P40200 585 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 PNLIPRP1P54315 467 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 TLE4Q04727 773 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 GTF3C1Q12789 2109 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 GBX1Q14549 363 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 OR1C1Q15619 314 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 MINDY4Q4G0A6 757 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 ADCK2Q7Z695 626 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 OTUD6BQ8N6M0 293 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 TMEM178AQ8NBL3 297 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 FAM98AQ8NCA5 519 aaKnown RBP14.88□□□□□ -0.03
LMNA-223ENST00000515459 RNF214Q8ND24 703 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 OR9A4Q8NGU2 314 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 SCMH1Q96GD3 660 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 FRMD6Q96NE9 622 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 BIRC8Q96P09 236 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 HES7Q9BYE0 225 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 ENKD1Q9H0I2 346 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 KCNK13Q9HB14 408 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 MCCC2Q9HCC0 563 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 FAM114A2Q9NRY5 505 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 TREX1Q9NSU2 369 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 ANKRD10Q9NXR5 420 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 NPIPA1Q9UND3 350 aa14.88□□□□□ -0.03
LMNA-223ENST00000515459 ASNA1O43681 348 aa14.87□□□□□ -0.03
LMNA-223ENST00000515459 NIPSNAP2O75323 286 aa14.87□□□□□ -0.03
LMNA-223ENST00000515459 PSIP1O75475 530 aaKnown RBP14.87□□□□□ -0.03
LMNA-223ENST00000515459 NSA2O95478 260 aaKnown RBP14.87□□□□□ -0.03
LMNA-223ENST00000515459 FMO4P31512 558 aa14.87□□□□□ -0.03
LMNA-223ENST00000515459 AGTR2P50052 363 aa14.87□□□□□ -0.03
LMNA-223ENST00000515459 ABATP80404 500 aa14.87□□□□□ -0.03
LMNA-223ENST00000515459 PTK6Q13882 451 aa14.87□□□□□ -0.03
LMNA-223ENST00000515459 OASLQ15646 514 aaKnown RBP14.87□□□□□ -0.03
LMNA-223ENST00000515459 KLHL38Q2WGJ6 581 aa14.87□□□□□ -0.03
LMNA-223ENST00000515459 KRTAP21-3Q3LHN1 58 aa14.87□□□□□ -0.03
LMNA-223ENST00000515459 SPINK14Q6IE38 97 aa14.87□□□□□ -0.03
LMNA-223ENST00000515459 NCCRP1Q6ZVX7 275 aaPredicted RBP14.87□□□□□ -0.03
LMNA-223ENST00000515459 SDCCAG8Q86SQ7 713 aaPredicted RBP14.87□□□□□ -0.03
LMNA-223ENST00000515459 CRLF3Q8IUI8 442 aa14.87□□□□□ -0.03
LMNA-223ENST00000515459 SYCE1Q8N0S2 351 aa14.87□□□□□ -0.03
LMNA-223ENST00000515459 PPFIBP2Q8ND30 876 aa14.87□□□□□ -0.03
LMNA-223ENST00000515459 MCOLN3Q8TDD5 553 aa14.87□□□□□ -0.03
LMNA-223ENST00000515459 PHF10Q8WUB8 498 aaKnown RBP14.87□□□□□ -0.03
LMNA-223ENST00000515459 FAM136AQ96C01 138 aa14.87□□□□□ -0.03
LMNA-223ENST00000515459 PKP4Q99569 1192 aa14.87□□□□□ -0.03
LMNA-223ENST00000515459 EBNA1BP2Q99848 306 aaKnown RBP14.87□□□□□ -0.03
LMNA-223ENST00000515459 ZNF148Q9UQR1 794 aa14.87□□□□□ -0.03
LMNA-223ENST00000515459 ZFHX3Q15911 3703 aa14.87□□□□□ -0.03
LMNA-223ENST00000515459 E7ENX8 843 aa14.86□□□□□ -0.03
LMNA-223ENST00000515459 H3BMM5 538 aa14.86□□□□□ -0.03
LMNA-223ENST00000515459 HAT1O14929 419 aa14.86□□□□□ -0.03
LMNA-223ENST00000515459 PFDN6O15212 129 aa14.86□□□□□ -0.03
LMNA-223ENST00000515459 LIASO43766 372 aa14.86□□□□□ -0.03
LMNA-223ENST00000515459 CATP04040 527 aaKnown RBP14.86□□□□□ -0.03
LMNA-223ENST00000515459 CHRM3P20309 590 aa14.86□□□□□ -0.03
LMNA-223ENST00000515459 NMBRP28336 390 aa14.86□□□□□ -0.03
LMNA-223ENST00000515459 XCR1P46094 333 aa14.86□□□□□ -0.03
LMNA-223ENST00000515459 SESN2P58004 480 aaPredicted RBP14.86□□□□□ -0.03
LMNA-223ENST00000515459 CRADDP78560 199 aa14.86□□□□□ -0.03
LMNA-223ENST00000515459 TAP2Q03519 686 aa14.86□□□□□ -0.03
LMNA-223ENST00000515459 EXT1Q16394 746 aa14.86□□□□□ -0.03
LMNA-223ENST00000515459 RNF187Q5TA31 235 aaPredicted RBP14.86□□□□□ -0.03
LMNA-223ENST00000515459 MRNIPQ6NTE8 343 aa14.86□□□□□ -0.03
LMNA-223ENST00000515459 GALNTL5Q7Z4T8 443 aa14.86□□□□□ -0.03
LMNA-223ENST00000515459 ANKRD37Q7Z713 158 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms