RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 PDLIM5Q96HC4 596 aaKnown RBP23.31■■□□□ 1.32
SNF8-213ENST00000514929 SGPP1Q9BX95 441 aa23.31■■□□□ 1.32
SNF8-213ENST00000514929 DRC3Q9H069 523 aa23.31■■□□□ 1.32
SNF8-213ENST00000514929 C5AR2Q9P296 337 aa23.31■■□□□ 1.32
SNF8-213ENST00000514929 TRPC4Q9UBN4 977 aa23.31■■□□□ 1.32
SNF8-213ENST00000514929 UTP11Q9Y3A2 253 aaKnown RBP23.31■■□□□ 1.32
SNF8-213ENST00000514929 MDC1Q14676 2089 aaKnown RBP23.3■■□□□ 1.32
SNF8-213ENST00000514929 SOCS6O14544 535 aa23.3■■□□□ 1.32
SNF8-213ENST00000514929 EIF3HO15372 352 aaKnown RBP eCLIP23.3■■□□□ 1.32
SNF8-213ENST00000514929 GUCA1CO95843 209 aa23.3■■□□□ 1.32
SNF8-213ENST00000514929 ENO2P09104 434 aaPredicted RBP23.3■■□□□ 1.32
SNF8-213ENST00000514929 ZNF37AP17032 561 aaPredicted RBP23.3■■□□□ 1.32
SNF8-213ENST00000514929 CSNK1G2P78368 415 aa23.3■■□□□ 1.32
SNF8-213ENST00000514929 TUBB8Q3ZCM7 444 aa23.3■■□□□ 1.32
SNF8-213ENST00000514929 VWA2Q5GFL6 755 aa23.3■■□□□ 1.32
SNF8-213ENST00000514929 DUPD1Q68J44 220 aa23.3■■□□□ 1.32
SNF8-213ENST00000514929 KIRREL2Q6UWL6 708 aa23.3■■□□□ 1.32
SNF8-213ENST00000514929 ATL1Q8WXF7 558 aa23.3■■□□□ 1.32
SNF8-213ENST00000514929 PYCR2Q96C36 320 aa23.3■■□□□ 1.32
SNF8-213ENST00000514929 HAUS8Q9BT25 410 aa23.3■■□□□ 1.32
SNF8-213ENST00000514929 MFRPQ9BY79 579 aa23.3■■□□□ 1.32
SNF8-213ENST00000514929 SH2B3Q9UQQ2 575 aa23.3■■□□□ 1.32
SNF8-213ENST00000514929 PLAAQ9Y263 795 aa23.3■■□□□ 1.32
SNF8-213ENST00000514929 MYO18BQ8IUG5 2567 aa23.3■■□□□ 1.32
SNF8-213ENST00000514929 A0A0A6YYC8 382 aaPredicted RBP23.29■■□□□ 1.32
SNF8-213ENST00000514929 I3L1I5 382 aaPredicted RBP23.29■■□□□ 1.32
SNF8-213ENST00000514929 STATHP02808 62 aa23.29■■□□□ 1.32
SNF8-213ENST00000514929 ITGA3P26006 1051 aa23.29■■□□□ 1.32
SNF8-213ENST00000514929 SSTR1P30872 391 aa23.29■■□□□ 1.32
SNF8-213ENST00000514929 GRK3P35626 688 aa23.29■■□□□ 1.32
SNF8-213ENST00000514929 SOX8P57073 446 aa23.29■■□□□ 1.32
SNF8-213ENST00000514929 NUP210LQ5VU65 1888 aa23.29■■□□□ 1.32
SNF8-213ENST00000514929 NKAPQ8N5F7 415 aaKnown RBP23.29■■□□□ 1.32
SNF8-213ENST00000514929 THAP11Q96EK4 314 aa23.29■■□□□ 1.32
SNF8-213ENST00000514929 VPS39Q96JC1 886 aa23.29■■□□□ 1.32
SNF8-213ENST00000514929 RAB17Q9H0T7 212 aa23.29■■□□□ 1.32
SNF8-213ENST00000514929 RHOJQ9H4E5 214 aa23.29■■□□□ 1.32
SNF8-213ENST00000514929 GRHL1Q9NZI5 618 aa23.29■■□□□ 1.32
SNF8-213ENST00000514929 C3orf18Q9UK00 162 aa23.29■■□□□ 1.32
SNF8-213ENST00000514929 UBR5O95071 2799 aaPredicted RBP23.29■■□□□ 1.32
SNF8-213ENST00000514929 IGLV3-12A0A075B6K2 115 aa23.28■■□□□ 1.32
SNF8-213ENST00000514929 KCNE1BA0A087WTH5 132 aa23.28■■□□□ 1.32
SNF8-213ENST00000514929 FFAR3O14843 346 aa23.28■■□□□ 1.32
SNF8-213ENST00000514929 GPR42O15529 346 aa23.28■■□□□ 1.32
SNF8-213ENST00000514929 FOXS1O43638 330 aa23.28■■□□□ 1.32
SNF8-213ENST00000514929 ALOX12BO75342 701 aa23.28■■□□□ 1.32
SNF8-213ENST00000514929 IPO13O94829 963 aaKnown RBP23.28■■□□□ 1.32
SNF8-213ENST00000514929 CDH1P12830 882 aa23.28■■□□□ 1.32
SNF8-213ENST00000514929 NPPBP16860 134 aa23.28■■□□□ 1.32
SNF8-213ENST00000514929 SLC26A3P40879 764 aa23.28■■□□□ 1.32
SNF8-213ENST00000514929 TAS2R39P59534 338 aa23.28■■□□□ 1.32
SNF8-213ENST00000514929 FAM53BQ14153 422 aa23.28■■□□□ 1.32
SNF8-213ENST00000514929 ZNF460Q14592 562 aa23.28■■□□□ 1.32
SNF8-213ENST00000514929 IRAK1BP1Q5VVH5 260 aa23.28■■□□□ 1.32
SNF8-213ENST00000514929 JMJD6Q6NYC1 403 aaPredicted RBP23.28■■□□□ 1.32
SNF8-213ENST00000514929 TMEM207Q6UWW9 146 aa23.28■■□□□ 1.32
SNF8-213ENST00000514929 VN1R4Q7Z5H5 301 aa23.28■■□□□ 1.32
SNF8-213ENST00000514929 ATCAYQ86WG3 371 aa23.28■■□□□ 1.32
SNF8-213ENST00000514929 ARHGEF39Q8N4T4 335 aa23.28■■□□□ 1.32
SNF8-213ENST00000514929 OR56A3Q8NH54 315 aa23.28■■□□□ 1.32
SNF8-213ENST00000514929 CDKL2Q92772 493 aa23.28■■□□□ 1.32
SNF8-213ENST00000514929 MIB2Q96AX9 1013 aa23.28■■□□□ 1.32
SNF8-213ENST00000514929 FBXL8Q96CD0 374 aa23.28■■□□□ 1.32
SNF8-213ENST00000514929 ZNF552Q9H707 407 aaPredicted RBP23.28■■□□□ 1.32
SNF8-213ENST00000514929 TXNDC16Q9P2K2 825 aa23.28■■□□□ 1.32
SNF8-213ENST00000514929 FEZF1A0PJY2 475 aa23.27■■□□□ 1.32
SNF8-213ENST00000514929 PIAS1O75925 651 aa23.27■■□□□ 1.32
SNF8-213ENST00000514929 AVPR1BP47901 424 aa23.27■■□□□ 1.32
SNF8-213ENST00000514929 SLC12A2P55011 1212 aa23.27■■□□□ 1.32
SNF8-213ENST00000514929 PLTPP55058 493 aa23.27■■□□□ 1.32
SNF8-213ENST00000514929 ILF2Q12905 390 aaKnown RBP23.27■■□□□ 1.32
SNF8-213ENST00000514929 SBSNQ6UWP8 590 aa23.27■■□□□ 1.32
SNF8-213ENST00000514929 EFCAB3Q8N7B9 438 aa23.27■■□□□ 1.32
SNF8-213ENST00000514929 RBMXL3Q8N7X1 1067 aaKnown RBP23.27■■□□□ 1.32
SNF8-213ENST00000514929 AMER3Q8N944 861 aa23.27■■□□□ 1.32
SNF8-213ENST00000514929 CAMKVQ8NCB2 501 aa23.27■■□□□ 1.32
SNF8-213ENST00000514929 OR11G2Q8NGC1 345 aa23.27■■□□□ 1.32
SNF8-213ENST00000514929 MKKSQ9NPJ1 570 aaPredicted RBP23.27■■□□□ 1.32
SNF8-213ENST00000514929 SLAMF7Q9NQ25 335 aa23.27■■□□□ 1.32
SNF8-213ENST00000514929 SMYD2Q9NRG4 433 aa23.27■■□□□ 1.32
SNF8-213ENST00000514929 C14orf105Q9NVL8 296 aa23.27■■□□□ 1.32
SNF8-213ENST00000514929 LUZP4Q9P127 313 aa23.27■■□□□ 1.32
SNF8-213ENST00000514929 IKZF3Q9UKT9 509 aa23.27■■□□□ 1.32
SNF8-213ENST00000514929 NOVA2Q9UNW9 492 aaKnown RBP23.27■■□□□ 1.32
SNF8-213ENST00000514929 MAP4K5Q9Y4K4 846 aa23.27■■□□□ 1.32
SNF8-213ENST00000514929 NPEPPSL1A6NEC2 478 aa23.26■■□□□ 1.31
SNF8-213ENST00000514929 MAP2K7O14733 419 aa23.26■■□□□ 1.31
SNF8-213ENST00000514929 SORBS2O94875 1100 aaKnown RBP23.26■■□□□ 1.31
SNF8-213ENST00000514929 ACPPP15309 386 aa23.26■■□□□ 1.31
SNF8-213ENST00000514929 BCL6P41182 706 aa23.26■■□□□ 1.31
SNF8-213ENST00000514929 EMP2P54851 167 aa23.26■■□□□ 1.31
SNF8-213ENST00000514929 CAV1Q03135 178 aa23.26■■□□□ 1.31
SNF8-213ENST00000514929 ZXDCQ2QGD7 858 aaPredicted RBP23.26■■□□□ 1.31
SNF8-213ENST00000514929 SLC6A19Q695T7 634 aa23.26■■□□□ 1.31
SNF8-213ENST00000514929 LAPTM4BQ86VI4 370 aa23.26■■□□□ 1.31
SNF8-213ENST00000514929 PARP9Q8IXQ6 854 aa23.26■■□□□ 1.31
SNF8-213ENST00000514929 CPT1CQ8TCG5 803 aa23.26■■□□□ 1.31
SNF8-213ENST00000514929 ANKRD7Q92527 254 aa23.26■■□□□ 1.31
SNF8-213ENST00000514929 TM9SF4Q92544 642 aa23.26■■□□□ 1.31
SNF8-213ENST00000514929 MACROD1Q9BQ69 325 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms