RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 RHEBL1Q8TAI7 183 aa13.33□□□□□ -0.28
USP46-209ENST00000514536 AENQ8WTP8 325 aaKnown RBP13.33□□□□□ -0.28
USP46-209ENST00000514536 SLC5A11Q8WWX8 675 aa13.33□□□□□ -0.28
USP46-209ENST00000514536 MTBPQ96DY7 904 aa13.33□□□□□ -0.28
USP46-209ENST00000514536 RUFY1Q96T51 708 aa13.33□□□□□ -0.28
USP46-209ENST00000514536 EFHD1Q9BUP0 239 aa13.33□□□□□ -0.28
USP46-209ENST00000514536 CNOT10Q9H9A5 744 aaKnown RBP13.33□□□□□ -0.28
USP46-209ENST00000514536 CUTCQ9NTM9 273 aa13.33□□□□□ -0.28
USP46-209ENST00000514536 NUDT4Q9NZJ9 180 aa13.33□□□□□ -0.28
USP46-209ENST00000514536 PSMC3IPQ9P2W1 217 aaPredicted RBP13.33□□□□□ -0.28
USP46-209ENST00000514536 NDOR1Q9UHB4 597 aa13.33□□□□□ -0.28
USP46-209ENST00000514536 PCDHGA4Q9Y5G9 962 aa13.33□□□□□ -0.28
USP46-209ENST00000514536 MRPS18BQ9Y676 258 aaKnown RBP13.33□□□□□ -0.28
USP46-209ENST00000514536 ATRXP46100 2492 aa13.33□□□□□ -0.28
USP46-209ENST00000514536 FITM1A5D6W6 292 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 MAP2K7O14733 419 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 STK16O75716 305 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 STATHP02808 62 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 COL6A2P12110 1019 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 MTHFD2P13995 350 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 AGXTP21549 392 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 GRK3P35626 688 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 SLCO1A2P46721 670 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 GCGRP47871 477 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 RPS15AP62244 130 aaKnown RBP13.32□□□□□ -0.28
USP46-209ENST00000514536 PRTGQ2VWP7 1150 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 YOD1Q5VVQ6 348 aaPredicted RBP13.32□□□□□ -0.28
USP46-209ENST00000514536 ZNF385CQ66K41 422 aaPredicted RBP13.32□□□□□ -0.28
USP46-209ENST00000514536 EMBQ6PCB8 327 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 ZNF517Q6ZMY9 492 aaPredicted RBP13.32□□□□□ -0.28
USP46-209ENST00000514536 GPR155Q7Z3F1 870 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 OR4K1Q8NGD4 311 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 SLC45A3Q96JT2 553 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 SCYL1Q96KG9 808 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 GBP5Q96PP8 586 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 ENAMQ9NRM1 1142 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 DNAJC11Q9NVH1 559 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 KCND3Q9UK17 655 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 FARSAQ9Y285 508 aaKnown RBP13.32□□□□□ -0.28
USP46-209ENST00000514536 LOC400499M0QZD8 3231 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 KCNE1BA0A087WTH5 132 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 CCDC189A1A4V9 331 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 SMIM23A6NLE4 172 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 SYCE1LA8MT33 242 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 C21orf140B9A014 251 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 NKX2-8O15522 239 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 CCNT2O60583 730 aaKnown RBP13.32□□□□□ -0.28
USP46-209ENST00000514536 RBP1P09455 135 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 BCL6P41182 706 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 AGTR2P50052 363 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 RPS15P62841 145 aaKnown RBP13.32□□□□□ -0.28
USP46-209ENST00000514536 CYP4F2P78329 520 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 DCDP81605 110 aaKnown RBP13.32□□□□□ -0.28
USP46-209ENST00000514536 HKDC1Q2TB90 917 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 NXPE4Q6UWF7 544 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 DTWD1Q8N5C7 304 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 SNX31Q8N9S9 440 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 PROKR1Q8TCW9 393 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 THAP11Q96EK4 314 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 CABS1Q96KC9 395 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 MACROD1Q9BQ69 325 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 DPH2Q9BQC3 489 aaPredicted RBP13.32□□□□□ -0.28
USP46-209ENST00000514536 GPR87Q9BY21 358 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 CD244Q9BZW8 370 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 SPNS1Q9H2V7 528 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 ASB1Q9Y576 335 aa13.32□□□□□ -0.28
USP46-209ENST00000514536 A0A1B0GX78 115 aa13.31□□□□□ -0.28
USP46-209ENST00000514536 ZNF891A8MT65 544 aaPredicted RBP13.31□□□□□ -0.28
USP46-209ENST00000514536 TXNDC9O14530 226 aa13.31□□□□□ -0.28
USP46-209ENST00000514536 DSCR3O14972 297 aa13.31□□□□□ -0.28
USP46-209ENST00000514536 P2RX6O15547 441 aa13.31□□□□□ -0.28
USP46-209ENST00000514536 OR1F1O43749 312 aa13.31□□□□□ -0.28
USP46-209ENST00000514536 IPO13O94829 963 aaKnown RBP13.31□□□□□ -0.28
USP46-209ENST00000514536 MED26O95402 600 aa13.31□□□□□ -0.28
USP46-209ENST00000514536 CAPN1P07384 714 aa13.31□□□□□ -0.28
USP46-209ENST00000514536 GNAZP19086 355 aa13.31□□□□□ -0.28
USP46-209ENST00000514536 RPS18P62269 152 aaKnown RBP13.31□□□□□ -0.28
USP46-209ENST00000514536 CDC16Q13042 620 aa13.31□□□□□ -0.28
USP46-209ENST00000514536 SLC9A5Q14940 896 aa13.31□□□□□ -0.28
USP46-209ENST00000514536 PFKFB4Q16877 469 aa13.31□□□□□ -0.28
USP46-209ENST00000514536 TSNAXIP1Q2TAA8 658 aa13.31□□□□□ -0.28
USP46-209ENST00000514536 NKAIN1Q4KMZ8 207 aa13.31□□□□□ -0.28
USP46-209ENST00000514536 TECRLQ5HYJ1 363 aa13.31□□□□□ -0.28
USP46-209ENST00000514536 MLIPQ5VWP3 458 aa13.31□□□□□ -0.28
USP46-209ENST00000514536 VN1R4Q7Z5H5 301 aa13.31□□□□□ -0.28
USP46-209ENST00000514536 TMPRSS11BQ86T26 416 aa13.31□□□□□ -0.28
USP46-209ENST00000514536 MFSD9Q8NBP5 474 aa13.31□□□□□ -0.28
USP46-209ENST00000514536 ZNF740Q8NDX6 193 aa13.31□□□□□ -0.28
USP46-209ENST00000514536 OR2W6PQ8NHA6 318 aa13.31□□□□□ -0.28
USP46-209ENST00000514536 EPS8L3Q8TE67 593 aaKnown RBP13.31□□□□□ -0.28
USP46-209ENST00000514536 SNRNP27Q8WVK2 155 aaKnown RBP13.31□□□□□ -0.28
USP46-209ENST00000514536 STARD8Q92502 1023 aa13.31□□□□□ -0.28
USP46-209ENST00000514536 CAVIN3Q969G5 261 aa13.31□□□□□ -0.28
USP46-209ENST00000514536 CAPS2Q9BXY5 557 aa13.31□□□□□ -0.28
USP46-209ENST00000514536 PELI2Q9HAT8 420 aa13.31□□□□□ -0.28
USP46-209ENST00000514536 CPSF2Q9P2I0 782 aaKnown RBP13.31□□□□□ -0.28
USP46-209ENST00000514536 RAB21Q9UL25 225 aa13.31□□□□□ -0.28
USP46-209ENST00000514536 RUVBL1Q9Y265 456 aaKnown RBP13.31□□□□□ -0.28
USP46-209ENST00000514536 PCDHGA6Q9Y5G7 932 aa13.31□□□□□ -0.28
USP46-209ENST00000514536 A0A1W2PPM1 405 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms