RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 MAGEH1Q9H213 219 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 TFB2MQ9H5Q4 396 aaKnown RBP7.18□□□□□ -1.26
CLIP1-205ENST00000514271 DHX35Q9H5Z1 703 aaKnown RBP7.18□□□□□ -1.26
CLIP1-205ENST00000514271 SP110Q9HB58 689 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 HMG20AQ9NP66 347 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 SLC6A13Q9NSD5 602 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 TMEM248Q9NWD8 314 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 PDE10AQ9Y233 779 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 ASB1Q9Y576 335 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 PLXND1Q9Y4D7 1925 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 A0A1W2PQ67 120 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 PRMT5O14744 637 aaPredicted RBP7.18□□□□□ -1.26
CLIP1-205ENST00000514271 SSX4O60224 188 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 NDUFS2O75306 463 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 UGT2B17O75795 530 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 IL7RP16871 459 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 ZNF37AP17032 561 aaPredicted RBP7.18□□□□□ -1.26
CLIP1-205ENST00000514271 ERCC2P18074 760 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 MZF1P28698 734 aaPredicted RBP7.18□□□□□ -1.26
CLIP1-205ENST00000514271 ARL4AP40617 200 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 GNPDA1P46926 289 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 DAPP51397 102 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 UGT2B15P54855 530 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 LIPEQ05469 1076 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 EPS8Q12929 822 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 TRAF2Q12933 501 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 TARDBPQ13148 414 aaKnown RBP eCLIP7.18□□□□□ -1.26
CLIP1-205ENST00000514271 AASDHQ4L235 1098 aaPredicted RBP7.18□□□□□ -1.26
CLIP1-205ENST00000514271 AGKQ53H12 422 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 RUNDC3AQ59EK9 446 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 TMEM31Q5JXX7 168 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 ARHGAP36Q6ZRI8 547 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 TRILQ7L0X0 811 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 BARD1Q99728 777 aaKnown RBP7.18□□□□□ -1.26
CLIP1-205ENST00000514271 FUZQ9BT04 418 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 PLA2G2FQ9BZM2 168 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 VPS51Q9UID3 782 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 MAGEL2Q9UJ55 1249 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 TP53BP1Q12888 1972 aaPredicted RBP7.18□□□□□ -1.26
CLIP1-205ENST00000514271 SAC3D1A6NKF1 404 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 FAM220BPB1ANY3 271 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 NEMP1O14524 444 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 CTDSP2O14595 271 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 PSMD3O43242 534 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 GUCY1B2O75343 617 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 ZNF254O75437 659 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 MLYCDO95822 493 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 GJA1P17302 382 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 PSMA4P25789 261 aaKnown RBP7.18□□□□□ -1.26
CLIP1-205ENST00000514271 NFKBIAP25963 317 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 ITGB7P26010 798 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 TGFBR1P36897 503 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 VIPR2P41587 438 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 DGKGP49619 791 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 TUBA1BP68363 451 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 DMPKQ09013 629 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 ART3Q13508 389 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 CLCA4Q14CN2 919 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 TBCEQ15813 527 aaPredicted RBP7.18□□□□□ -1.26
CLIP1-205ENST00000514271 VPS26BQ4G0F5 336 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 CRTC3Q6UUV7 619 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 TUBA1AQ71U36 451 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 SLC46A3Q7Z3Q1 461 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 ZNF605Q86T29 641 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 MIB1Q86YT6 1006 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 BBS7Q8IWZ6 715 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 SPEM1Q8N4L4 309 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 UBTD2Q8WUN7 234 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 EDEM1Q92611 657 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 GTF2H4Q92759 462 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 RSPRY1Q96DX4 576 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 THAP11Q96EK4 314 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 CPPED1Q9BRF8 314 aaPredicted RBP7.18□□□□□ -1.26
CLIP1-205ENST00000514271 RHNO1Q9BSD3 238 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 BBS2Q9BXC9 721 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 DERL2Q9GZP9 239 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 MMP27Q9H306 513 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 KAT8Q9H7Z6 458 aaKnown RBP7.18□□□□□ -1.26
CLIP1-205ENST00000514271 DNAJB9Q9UBS3 223 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 GIMAP2Q9UG22 337 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 PCDHB14Q9Y5E9 798 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 ARPC4-TTLL3A0A0A6YYG9 625 aa7.17□□□□□ -1.26
CLIP1-205ENST00000514271 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.17□□□□□ -1.26
CLIP1-205ENST00000514271 PIP5K1BO14986 540 aa7.17□□□□□ -1.26
CLIP1-205ENST00000514271 SCN2BO60939 215 aa7.17□□□□□ -1.26
CLIP1-205ENST00000514271 GCM2O75603 506 aaPredicted RBP7.17□□□□□ -1.26
CLIP1-205ENST00000514271 GRAP2O75791 330 aa7.17□□□□□ -1.26
CLIP1-205ENST00000514271 NNMTP40261 264 aa7.17□□□□□ -1.26
CLIP1-205ENST00000514271 P2RX3P56373 397 aa7.17□□□□□ -1.26
CLIP1-205ENST00000514271 SESN2P58004 480 aaPredicted RBP7.17□□□□□ -1.26
CLIP1-205ENST00000514271 ZNF177Q13360 481 aaPredicted RBP7.17□□□□□ -1.26
CLIP1-205ENST00000514271 GALNT3Q14435 633 aa7.17□□□□□ -1.26
CLIP1-205ENST00000514271 NPTX1Q15818 432 aa7.17□□□□□ -1.26
CLIP1-205ENST00000514271 ATAD3CQ5T2N8 411 aa7.17□□□□□ -1.26
CLIP1-205ENST00000514271 AFTPHQ6ULP2 937 aa7.17□□□□□ -1.26
CLIP1-205ENST00000514271 TPRG1Q6ZUI0 275 aa7.17□□□□□ -1.26
CLIP1-205ENST00000514271 NANOGNBQ7Z5D8 188 aa7.17□□□□□ -1.26
CLIP1-205ENST00000514271 DENND1CQ8IV53 801 aa7.17□□□□□ -1.26
CLIP1-205ENST00000514271 TCTE3Q8IZS6 198 aa7.17□□□□□ -1.26
CLIP1-205ENST00000514271 METTL4Q8N3J2 472 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms