RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 AP2M1Q96CW1 435 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 LINGO1Q96FE5 620 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 BICD1Q96G01 975 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 ADGRG7Q96K78 797 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 PANX3Q96QZ0 392 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 RASL10BQ96S79 203 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 NAP1L3Q99457 506 aaPredicted RBP3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 C17orf62Q9BQA9 187 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 FSD1Q9BTV5 496 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 ZMYND12Q9H0C1 365 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 TSPYL1Q9H0U9 437 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 NAPBQ9H115 298 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 IL25Q9H293 177 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 EBF2Q9HAK2 575 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 MAGEF1Q9HAY2 307 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 APOBEC3GQ9HC16 384 aaKnown RBP3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 TRPC7Q9HCX4 862 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 MIS18AQ9NYP9 233 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 TRIM10Q9UDY6 481 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 ZDHHC2Q9UIJ5 367 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 POU2F3Q9UKI9 436 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 TDRKHQ9Y2W6 561 aaKnown RBP3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 MAGI3Q5TCQ9 1506 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 PRG4Q92954 1404 aaPredicted RBP3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 IL16Q14005 1332 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 TCOF1Q13428 1488 aaKnown RBP3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 DISP1Q96F81 1524 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 SYCE3A1L190 88 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 NPIPA3F8WFD2 350 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 BAG4O95429 457 aaKnown RBP3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 PPP1R3DO95685 299 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 ALPPP05187 535 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 ALPPL2P10696 532 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 HSPA5P11021 654 aaKnown RBP3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 GP1BBP13224 206 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 DESP17661 470 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 ANOS1P23352 680 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 SERPINB6P35237 376 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 IL15P40933 162 aaPredicted RBP3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 NR2C2P49116 596 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 CASP9P55211 416 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 UCP2P55851 309 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 EVCP57679 992 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 PITX1P78337 314 aaPredicted RBP3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 RPL24P83731 157 aaKnown RBP3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 SNTA1Q13424 505 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 TSTA3Q13630 321 aaPredicted RBP3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 GAMTQ14353 236 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 IFI44LQ53G44 452 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 PRAMEF8Q5VWM4 474 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 FAM46CQ5VWP2 391 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 OR4A47Q6IF82 309 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 FAM166AQ6J272 317 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 NEK5Q6P3R8 708 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 FAM171BQ6P995 826 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 PRSS55Q6UWB4 352 aaPredicted RBP3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 RAD9BQ6WBX8 426 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 PIWIL4Q7Z3Z4 852 aaKnown RBP3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 ZNF554Q86TJ5 538 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 AQP12AQ8IXF9 295 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 MMD2Q8IY49 270 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 APCDD1Q8J025 514 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 LGI2Q8N0V4 545 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 ANKRD20A12PQ8NF67 263 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 LMO3Q8TAP4 145 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 TMED6Q8WW62 240 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 PYCR2Q96C36 320 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 FAM20AQ96MK3 541 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 C17orf77Q96MU5 243 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 RUNDC3BQ96NL0 473 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 TSSK2Q96PF2 358 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 PRAM1Q96QH2 718 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 PKP4Q99569 1192 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 MAP3K3Q99759 626 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 LRRC1Q9BTT6 524 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 S1PR5Q9H228 398 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 HSD3B7Q9H2F3 369 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 GAREM1Q9H706 876 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 PDRG1Q9NUG6 133 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 INTS10Q9NVR2 710 aaKnown RBP3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 TRMT6Q9UJA5 497 aaKnown RBP3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 GMEB2Q9UKD1 530 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 TSPAN16Q9UKR8 245 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 KCNS2Q9ULS6 477 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 SLC7A7Q9UM01 511 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 PIN4Q9Y237 131 aaKnown RBP3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 RPH3AQ9Y2J0 694 aaPredicted RBP3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 TMED3Q9Y3Q3 217 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 KLK4Q9Y5K2 254 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 TEX264Q9Y6I9 313 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 DAPK1P53355 1430 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 TROQ12816 1431 aaPredicted RBP3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 CEP170Q5SW79 1584 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 PFASO15067 1338 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 NUP153P49790 1475 aaKnown RBP3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 PLB1Q6P1J6 1458 aa3.16□□□□□ -1.9
CALCOCO2-223ENST00000514267 ROCK1Q13464 1354 aa3.15□□□□□ -1.9
CALCOCO2-223ENST00000514267 ANKRD30AQ9BXX3 1397 aa3.15□□□□□ -1.9
CALCOCO2-223ENST00000514267 ARHGEF11O15085 1522 aa3.15□□□□□ -1.9
CALCOCO2-223ENST00000514267 GCC2Q8IWJ2 1684 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms