RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 SP1P08047 785 aa19.17■□□□□ 0.66
SQSTM1-215ENST00000514093 TPM1P09493 284 aa19.17■□□□□ 0.66
SQSTM1-215ENST00000514093 DNAJA1P31689 397 aaKnown RBP19.17■□□□□ 0.66
SQSTM1-215ENST00000514093 PTPN7P35236 360 aa19.17■□□□□ 0.66
SQSTM1-215ENST00000514093 PPARGP37231 505 aaPredicted RBP19.17■□□□□ 0.66
SQSTM1-215ENST00000514093 GRIA1P42261 906 aa19.17■□□□□ 0.66
SQSTM1-215ENST00000514093 CDH17Q12864 832 aa19.17■□□□□ 0.66
SQSTM1-215ENST00000514093 MAPKAPK3Q16644 382 aa19.17■□□□□ 0.66
SQSTM1-215ENST00000514093 SLC25A25Q6KCM7 469 aa19.17■□□□□ 0.66
SQSTM1-215ENST00000514093 OTOAQ7RTW8 1153 aa19.17■□□□□ 0.66
SQSTM1-215ENST00000514093 LINC00523Q86TU6 105 aa19.17■□□□□ 0.66
SQSTM1-215ENST00000514093 TMEM200AQ86VY9 491 aa19.17■□□□□ 0.66
SQSTM1-215ENST00000514093 PLD3Q8IV08 490 aa19.17■□□□□ 0.66
SQSTM1-215ENST00000514093 UCK2Q9BZX2 261 aa19.17■□□□□ 0.66
SQSTM1-215ENST00000514093 SPATA7Q9P0W8 599 aa19.17■□□□□ 0.66
SQSTM1-215ENST00000514093 PCYOX1Q9UHG3 505 aa19.17■□□□□ 0.66
SQSTM1-215ENST00000514093 ANKHD1Q8IWZ3 2542 aaKnown RBP19.16■□□□□ 0.66
SQSTM1-215ENST00000514093 SOWAHDA6NJG2 315 aa19.16■□□□□ 0.66
SQSTM1-215ENST00000514093 NEURL1O76050 574 aa19.16■□□□□ 0.66
SQSTM1-215ENST00000514093 IGFBP2P18065 325 aa19.16■□□□□ 0.66
SQSTM1-215ENST00000514093 RPA3P35244 121 aaPredicted RBP19.16■□□□□ 0.66
SQSTM1-215ENST00000514093 CCNFP41002 786 aa19.16■□□□□ 0.66
SQSTM1-215ENST00000514093 IST1P53990 364 aa19.16■□□□□ 0.66
SQSTM1-215ENST00000514093 PRAMEP78395 509 aa19.16■□□□□ 0.66
SQSTM1-215ENST00000514093 NAA25Q14CX7 972 aa19.16■□□□□ 0.66
SQSTM1-215ENST00000514093 P3H1Q32P28 736 aa19.16■□□□□ 0.66
SQSTM1-215ENST00000514093 PRSS41Q7RTY9 318 aa19.16■□□□□ 0.66
SQSTM1-215ENST00000514093 ANKRD37Q7Z713 158 aa19.16■□□□□ 0.66
SQSTM1-215ENST00000514093 MARVELD2Q8N4S9 558 aa19.16■□□□□ 0.66
SQSTM1-215ENST00000514093 CPSF7Q8N684 471 aaKnown RBP19.16■□□□□ 0.66
SQSTM1-215ENST00000514093 FAM98AQ8NCA5 519 aaKnown RBP19.16■□□□□ 0.66
SQSTM1-215ENST00000514093 FOPNLQ96NB1 174 aa19.16■□□□□ 0.66
SQSTM1-215ENST00000514093 ABCF3Q9NUQ8 709 aa19.16■□□□□ 0.66
SQSTM1-215ENST00000514093 C19orf25Q9UFG5 118 aaPredicted RBP19.16■□□□□ 0.66
SQSTM1-215ENST00000514093 ANAPC5Q9UJX4 755 aa19.16■□□□□ 0.66
SQSTM1-215ENST00000514093 HRH3Q9Y5N1 445 aa19.16■□□□□ 0.66
SQSTM1-215ENST00000514093 MRFAP1Q9Y605 127 aa19.16■□□□□ 0.66
SQSTM1-215ENST00000514093 PRRC2AP48634 2157 aaKnown RBP19.16■□□□□ 0.66
SQSTM1-215ENST00000514093 FAM90A27PA6NNH2 459 aa19.15■□□□□ 0.66
SQSTM1-215ENST00000514093 ZNF24P17028 368 aa19.15■□□□□ 0.66
SQSTM1-215ENST00000514093 PTGER1P34995 402 aa19.15■□□□□ 0.66
SQSTM1-215ENST00000514093 AVPR1BP47901 424 aa19.15■□□□□ 0.66
SQSTM1-215ENST00000514093 ACVR1Q04771 509 aa19.15■□□□□ 0.66
SQSTM1-215ENST00000514093 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.15■□□□□ 0.66
SQSTM1-215ENST00000514093 ZNF468Q5VIY5 522 aaPredicted RBP19.15■□□□□ 0.66
SQSTM1-215ENST00000514093 ZNF425Q6IV72 752 aa19.15■□□□□ 0.66
SQSTM1-215ENST00000514093 M1APQ8TC57 530 aa19.15■□□□□ 0.66
SQSTM1-215ENST00000514093 MAGEC3Q8TD91 643 aa19.15■□□□□ 0.66
SQSTM1-215ENST00000514093 FAM136AQ96C01 138 aa19.15■□□□□ 0.66
SQSTM1-215ENST00000514093 PANX3Q96QZ0 392 aa19.15■□□□□ 0.66
SQSTM1-215ENST00000514093 P2RY12Q9H244 342 aa19.15■□□□□ 0.66
SQSTM1-215ENST00000514093 CATSPERZQ9NTU4 200 aa19.15■□□□□ 0.66
SQSTM1-215ENST00000514093 HCN3Q9P1Z3 774 aa19.15■□□□□ 0.66
SQSTM1-215ENST00000514093 LRFN1Q9P244 771 aa19.15■□□□□ 0.66
SQSTM1-215ENST00000514093 TAC3Q9UHF0 121 aa19.15■□□□□ 0.66
SQSTM1-215ENST00000514093 MAP1AP78559 2803 aaPredicted RBP19.14■□□□□ 0.65
SQSTM1-215ENST00000514093 HAT1O14929 419 aa19.14■□□□□ 0.65
SQSTM1-215ENST00000514093 PHF2O75151 1096 aa19.14■□□□□ 0.65
SQSTM1-215ENST00000514093 SUN1O94901 812 aa19.14■□□□□ 0.65
SQSTM1-215ENST00000514093 GAS8O95995 478 aa19.14■□□□□ 0.65
SQSTM1-215ENST00000514093 TPOP07202 933 aa19.14■□□□□ 0.65
SQSTM1-215ENST00000514093 ADRA1DP25100 572 aa19.14■□□□□ 0.65
SQSTM1-215ENST00000514093 RWDD2BP57060 319 aa19.14■□□□□ 0.65
SQSTM1-215ENST00000514093 FAM53BQ14153 422 aa19.14■□□□□ 0.65
SQSTM1-215ENST00000514093 PPP1R21Q6ZMI0 780 aa19.14■□□□□ 0.65
SQSTM1-215ENST00000514093 ADCK2Q7Z695 626 aa19.14■□□□□ 0.65
SQSTM1-215ENST00000514093 VSTM4Q8IW00 320 aa19.14■□□□□ 0.65
SQSTM1-215ENST00000514093 PPFIBP2Q8ND30 876 aa19.14■□□□□ 0.65
SQSTM1-215ENST00000514093 OR9A1PQ8NGU1 263 aa19.14■□□□□ 0.65
SQSTM1-215ENST00000514093 OR51Q1Q8NH59 317 aa19.14■□□□□ 0.65
SQSTM1-215ENST00000514093 SMPDL3AQ92484 453 aa19.14■□□□□ 0.65
SQSTM1-215ENST00000514093 ALG3Q92685 438 aa19.14■□□□□ 0.65
SQSTM1-215ENST00000514093 MACROD1Q9BQ69 325 aa19.14■□□□□ 0.65
SQSTM1-215ENST00000514093 ZNF559Q9BR84 538 aa19.14■□□□□ 0.65
SQSTM1-215ENST00000514093 GSX1Q9H4S2 264 aaPredicted RBP19.14■□□□□ 0.65
SQSTM1-215ENST00000514093 CDCP1Q9H5V8 836 aa19.14■□□□□ 0.65
SQSTM1-215ENST00000514093 GNPTGQ9UJJ9 305 aa19.14■□□□□ 0.65
SQSTM1-215ENST00000514093 A0A1B0GTH9 108 aa19.13■□□□□ 0.65
SQSTM1-215ENST00000514093 A0A1B0GTL3 188 aa19.13■□□□□ 0.65
SQSTM1-215ENST00000514093 CD3EAPO15446 510 aaKnown RBP19.13■□□□□ 0.65
SQSTM1-215ENST00000514093 ERGP11308 486 aa19.13■□□□□ 0.65
SQSTM1-215ENST00000514093 PKMP14618 531 aaKnown RBP19.13■□□□□ 0.65
SQSTM1-215ENST00000514093 XCR1P46094 333 aa19.13■□□□□ 0.65
SQSTM1-215ENST00000514093 EIF3BP55884 814 aaKnown RBP19.13■□□□□ 0.65
SQSTM1-215ENST00000514093 PRDX1Q06830 199 aaKnown RBP19.13■□□□□ 0.65
SQSTM1-215ENST00000514093 AARS2Q5JTZ9 985 aaKnown RBP19.13■□□□□ 0.65
SQSTM1-215ENST00000514093 ICE2Q659A1 982 aa19.13■□□□□ 0.65
SQSTM1-215ENST00000514093 CD163Q86VB7 1156 aa19.13■□□□□ 0.65
SQSTM1-215ENST00000514093 TGIF2LYQ8IUE0 185 aa19.13■□□□□ 0.65
SQSTM1-215ENST00000514093 DMRTC2Q8IXT2 367 aaPredicted RBP19.13■□□□□ 0.65
SQSTM1-215ENST00000514093 EID3Q8N140 333 aa19.13■□□□□ 0.65
SQSTM1-215ENST00000514093 HORMAD2Q8N7B1 307 aa19.13■□□□□ 0.65
SQSTM1-215ENST00000514093 MRFAP1L1Q96HT8 127 aa19.13■□□□□ 0.65
SQSTM1-215ENST00000514093 ETNK1Q9HBU6 452 aa19.13■□□□□ 0.65
SQSTM1-215ENST00000514093 MMP25Q9NPA2 562 aa19.13■□□□□ 0.65
SQSTM1-215ENST00000514093 RIMKLBQ9ULI2 386 aa19.13■□□□□ 0.65
SQSTM1-215ENST00000514093 RNF6Q9Y252 685 aa19.13■□□□□ 0.65
SQSTM1-215ENST00000514093 TCAF1Q9Y4C2 921 aa19.13■□□□□ 0.65
SQSTM1-215ENST00000514093 PCDHA13Q9Y5I0 950 aa19.13■□□□□ 0.65
SQSTM1-215ENST00000514093 HEATR5BQ9P2D3 2071 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms