RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 MTX3Q5HYI7 312 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 SPANXN4Q5MJ08 99 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 OGFRL1Q5TC84 451 aaPredicted RBP8.06□□□□□ -1.12
RNF4-220ENST00000513578 KIAA0895LQ68EN5 471 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 KIAA1324Q6UXG2 1013 aaKnown RBP8.06□□□□□ -1.12
RNF4-220ENST00000513578 ZNF852Q6ZMS4 543 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 GCNT7Q6ZNI0 430 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 ABI3BPQ7Z7G0 1075 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 GPR180Q86V85 440 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 C17orf64Q86WR6 236 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 METTL4Q8N3J2 472 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 RNF148Q8N7C7 305 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 TMEM145Q8NBT3 493 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 CATSPER1Q8NEC5 780 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 TNIP2Q8NFZ5 429 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.06□□□□□ -1.12
RNF4-220ENST00000513578 ZFPM2Q8WW38 1151 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 DNAJC9Q8WXX5 260 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 HLA-CQ95604 372 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 COQ8BQ96D53 544 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 MTERF3Q96E29 417 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 ITCHQ96J02 903 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 C12orf66Q96MD2 445 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 CCDC115Q96NT0 180 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 OR52E6Q96RD3 313 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 FERD3LQ96RJ6 166 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 NELL2Q99435 816 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 AIF1LQ9BQI0 150 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 SLC39A3Q9BRY0 314 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 EFHD1Q9BUP0 239 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 SARGQ9BW04 601 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 PAIP1Q9H074 479 aaKnown RBP8.06□□□□□ -1.12
RNF4-220ENST00000513578 PCDHAC1Q9H158 963 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 FGF22Q9HCT0 170 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 SERHLQ9NQF3 203 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 GPR27Q9NS67 375 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 CCM2LQ9NUG4 571 aaPredicted RBP8.06□□□□□ -1.12
RNF4-220ENST00000513578 FAM120CQ9NX05 1096 aaKnown RBP8.06□□□□□ -1.12
RNF4-220ENST00000513578 TRNAU1APQ9NX07 287 aaKnown RBP8.06□□□□□ -1.12
RNF4-220ENST00000513578 SLAMF8Q9P0V8 285 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 EBF1Q9UH73 591 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 ATP6V1HQ9UI12 483 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 RIMS3Q9UJD0 308 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 CNOT11Q9UKZ1 510 aaKnown RBP8.06□□□□□ -1.12
RNF4-220ENST00000513578 SH2B3Q9UQQ2 575 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 WDR37Q9Y2I8 494 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 MRPS17Q9Y2R5 130 aaKnown RBP8.06□□□□□ -1.12
RNF4-220ENST00000513578 SNX13Q9Y5W8 968 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 DGKBQ9Y6T7 804 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 PRUNE2Q8WUY3 3088 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 CEP192Q8TEP8 1941 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 CHD8Q9HCK8 2581 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 PRR23AA6NEV1 266 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 PRAMEF26H0Y7S4 382 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 H0YJX3 145 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 TBX19O60806 448 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 SCN2BO60939 215 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 ZNF217O75362 1048 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 ETHE1O95571 254 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 BAG2O95816 211 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 GPIP06744 558 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 ZCCHC18P0CG32 403 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 MTHFD1P11586 935 aaKnown RBP8.05□□□□□ -1.12
RNF4-220ENST00000513578 PCNAP12004 261 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 ATP6V1C1P21283 382 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 PTPN6P29350 595 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 MAT2AP31153 395 aaKnown RBP8.05□□□□□ -1.12
RNF4-220ENST00000513578 MSX2P35548 267 aaPredicted RBP8.05□□□□□ -1.12
RNF4-220ENST00000513578 KIR3DL1P43629 444 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 RABIFP47224 123 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 CCR8P51685 355 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 STARD6P59095 220 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 RPS13P62277 151 aaKnown RBP8.05□□□□□ -1.12
RNF4-220ENST00000513578 PHC1P78364 1004 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 PRDX1Q06830 199 aaKnown RBP8.05□□□□□ -1.12
RNF4-220ENST00000513578 MAP7Q14244 749 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 CLCA4Q14CN2 919 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 RPE65Q16518 533 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 UGT8Q16880 541 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 THEMIS2Q5TEJ8 643 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 ANXA8L1Q5VT79 327 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 ICE2Q659A1 982 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 TLDC1Q6P9B6 456 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 TMIGD1Q6UXZ0 262 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 IKBIPQ70UQ0 350 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 SPATA24Q86W54 205 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 CALHM3Q86XJ0 350 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 SYT12Q8IV01 421 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 KRTCAP2Q8N6L1 136 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 C1orf52Q8N6N3 182 aaKnown RBP8.05□□□□□ -1.12
RNF4-220ENST00000513578 NATD1Q8N6N6 113 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 FAM156AQ8NDB6 213 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 PAPD5Q8NDF8 572 aaKnown RBP8.05□□□□□ -1.12
RNF4-220ENST00000513578 ADCY4Q8NFM4 1077 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 OR2A1Q8NGT9 310 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 DNAJB14Q8TBM8 379 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 OR1E3Q8WZA6 343 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 ZNF764Q96H86 408 aaPredicted RBP8.05□□□□□ -1.12
RNF4-220ENST00000513578 NAF1Q96HR8 494 aaKnown RBP8.05□□□□□ -1.12
RNF4-220ENST00000513578 RSRC1Q96IZ7 334 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms