RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 SDR39U1Q9NRG7 319 aaPredicted RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 MCUBQ9NWR8 336 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 SCN3BQ9NY72 215 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 UBP1Q9NZI7 540 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 ANKMY1Q9P2S6 941 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 XPO7Q9UIA9 1087 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 MRTO4Q9UKD2 239 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 GPSM3Q9Y4H4 160 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PCDHB4Q9Y5E5 795 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 TMEM120BA0PK00 339 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 BTBD17A6NE02 478 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 MGAT4DA6NG13 374 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PDZK1P1A8MUH7 402 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PRR5-ARHGAP8B1AHC4 643 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 MDM4O15151 490 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 HUS1O60921 280 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 C22orf31O95567 290 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 RPLP0P05388 317 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 SERPIND1P05546 499 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 MYCLP12524 364 aaPredicted RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PLS3P13797 630 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 COX7A2P14406 83 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 CTHP32929 405 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 RPL13AP40429 203 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 TAF6P49848 677 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 NUDT2P50583 147 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC16A1P53985 500 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 ARHGAP8P85298 464 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 IL9RQ01113 521 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PLP2Q04941 152 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 VAC14Q08AM6 782 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 SNTA1Q13424 505 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 CCINQ13939 588 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNHIT3Q15649 155 aaPredicted RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 KBTBD12Q3ZCT8 623 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAM26FQ5R3K3 315 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 C10orf76Q5T2E6 689 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC25A25Q6KCM7 469 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 IZUMO2Q6UXV1 221 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 Q6ZSR3 168 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PTAR1Q7Z6K3 402 aaPredicted RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 STRA8Q7Z7C7 330 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 LRRC6Q86X45 466 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 RNF135Q8IUD6 432 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 BRSK2Q8IWQ3 736 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 CYP4Z2PQ8N1L4 340 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC39A11Q8N1S5 342 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 KIF2BQ8N4N8 673 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 ANKFN1Q8N957 763 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 ENKURQ8TC29 256 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 BRSK1Q8TDC3 778 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 AFG1LQ8WV93 481 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PGBD4Q96DM1 585 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 SPACA7Q96KW9 195 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 C1orf147Q96MC9 270 aaPredicted RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 SPATA13Q96N96 652 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 CCDC115Q96NT0 180 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 QRFPRQ96P65 431 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 AIFM2Q9BRQ8 373 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 CCDC28BQ9BUN5 200 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 SPATA9Q9BWV2 254 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 ADAM19Q9H013 955 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PCBD2Q9H0N5 130 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 ATG5Q9H1Y0 275 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 TOR3AQ9H497 397 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 RPF1Q9H9Y2 349 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 RAB9BQ9NP90 201 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 DNAAF2Q9NVR5 837 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 IL1RAPL1Q9NZN1 696 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 ERVK-19Q9WJR5 959 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 AP4S1Q9Y587 144 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PCDHGA1Q9Y5H4 931 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 POLQO75417 2590 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 MED12Q93074 2177 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 LOC285095A0A1B0GVY8 99 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 PIPSLA2A3N6 862 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 PMS2P1A4D2B8 440 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 HMX3A6NHT5 357 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 SMIM23A6NLE4 172 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 BTN3A3O00478 584 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 CTDSP2O14595 271 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 TSPAN4O14817 238 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 CNOT3O75175 753 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 CILPO75339 1184 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 ERAL1O75616 437 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 NUDT14O95848 222 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 AHSGP02765 367 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 PDHA1P08559 390 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 HCKP08631 526 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 H2AFZP0C0S5 128 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 MYL4P12829 197 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 TCP1P17987 556 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 MYF6P23409 242 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 CRHBPP24387 322 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 COL8A2P25067 703 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 HOXD9P28356 352 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 PRDX3P30048 256 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 TLX1P31314 330 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 IFNGR2P38484 337 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 CASRP41180 1078 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms