RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 TMEM184CQ9NVA4 438 aa12.65□□□□□ -0.38
RNF4-215ENST00000511843 FBXL4Q9UKA2 621 aa12.65□□□□□ -0.38
RNF4-215ENST00000511843 HS3ST3B1Q9Y662 390 aa12.65□□□□□ -0.38
RNF4-215ENST00000511843 PABPN1LA6NDY0 278 aaKnown RBP12.64□□□□□ -0.39
RNF4-215ENST00000511843 PEX12O00623 359 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 SOCS6O14544 535 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 EIF3HO15372 352 aaKnown RBP eCLIP12.64□□□□□ -0.39
RNF4-215ENST00000511843 PHGDHO43175 533 aaKnown RBP12.64□□□□□ -0.39
RNF4-215ENST00000511843 LCMT2O60294 686 aaKnown RBP12.64□□□□□ -0.39
RNF4-215ENST00000511843 C1QAP02745 245 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 CD63P08962 238 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 NPPBP16860 134 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 BCL6P41182 706 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 RRADP55042 308 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 MAT1AQ00266 395 aaKnown RBP12.64□□□□□ -0.39
RNF4-215ENST00000511843 CKAP4Q07065 602 aaKnown RBP12.64□□□□□ -0.39
RNF4-215ENST00000511843 KLC1Q07866 573 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 IGFBP7Q16270 282 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 PPP1R3AQ16821 1122 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 C18orf21Q32NC0 220 aaPredicted RBP12.64□□□□□ -0.39
RNF4-215ENST00000511843 DCAF10Q5QP82 559 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 UBAP2Q5T6F2 1119 aaKnown RBP12.64□□□□□ -0.39
RNF4-215ENST00000511843 CAPN13Q6MZZ7 669 aaPredicted RBP12.64□□□□□ -0.39
RNF4-215ENST00000511843 C8orf74Q6P047 294 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 LCTLQ6UWM7 567 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 C3orf62Q6ZUJ4 267 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 LAPTM4BQ86VI4 370 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 AMER3Q8N944 861 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 TEX19Q8NA77 164 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 ZCCHC10Q8TBK6 192 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 STT3BQ8TCJ2 826 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 FBXL8Q96CD0 374 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 MMABQ96EY8 250 aaPredicted RBP12.64□□□□□ -0.39
RNF4-215ENST00000511843 TSNARE1Q96NA8 513 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 MFRPQ9BY79 579 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 TRIM54Q9BYV2 358 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 SPNS1Q9H2V7 528 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 WDR54Q9H977 334 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 GPR83Q9NYM4 423 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 TRPC4Q9UBN4 977 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 ANAPC2Q9UJX6 822 aa12.64□□□□□ -0.39
RNF4-215ENST00000511843 PCDHGA9Q9Y5G4 932 aaKnown RBP12.64□□□□□ -0.39
RNF4-215ENST00000511843 FAM159BA6NKW6 160 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 VSTM2BA6NLU5 285 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 ALBP02768 609 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 ZGLP1P0C6A0 271 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 MMP11P24347 488 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 MAGEA4P43358 317 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 SLC12A2P55011 1212 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 MLLT10P55197 1068 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 AP1S2P56377 157 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 OCA2Q04671 838 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 TSNQ15631 228 aaKnown RBP12.63□□□□□ -0.39
RNF4-215ENST00000511843 RBBP7Q16576 425 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 KBTBD12Q3ZCT8 623 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 CATSPEREQ5SY80 951 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 FAAH2Q6GMR7 532 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 PRMT9Q6P2P2 845 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 KIRREL2Q6UWL6 708 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 CTAGE3PQ8IX95 158 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 NKAPQ8N5F7 415 aaKnown RBP12.63□□□□□ -0.39
RNF4-215ENST00000511843 AMER2Q8N7J2 671 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 PPM1NQ8N819 430 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 ZNF740Q8NDX6 193 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 OR9A4Q8NGU2 314 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 OR56A3Q8NH54 315 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 MIEF2Q96C03 454 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 C8orf44Q96CB5 159 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 MOCOSQ96EN8 888 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 PDLIM5Q96HC4 596 aaKnown RBP12.63□□□□□ -0.39
RNF4-215ENST00000511843 RBBP8Q99708 897 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 CRB3Q9BUF7 120 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 DRC3Q9H069 523 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 LRRC4CQ9HCJ2 640 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 GPAMQ9HCL2 828 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 NSMCE4AQ9NXX6 385 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 TXNDC16Q9P2K2 825 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 ZNF282Q9UDV7 671 aaPredicted RBP12.63□□□□□ -0.39
RNF4-215ENST00000511843 C3orf18Q9UK00 162 aa12.63□□□□□ -0.39
RNF4-215ENST00000511843 SPENQ96T58 3664 aaKnown RBP12.62□□□□□ -0.39
RNF4-215ENST00000511843 SHANK1Q9Y566 2161 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 CTAGE15A4D2H0 777 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 NCF1BA6NI72 391 aaPredicted RBP12.62□□□□□ -0.39
RNF4-215ENST00000511843 NCF1CA8MVU1 366 aaPredicted RBP12.62□□□□□ -0.39
RNF4-215ENST00000511843 AGPSO00116 658 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 JRKO75564 520 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 WISP1O95388 367 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 WISP3O95389 354 aaPredicted RBP12.62□□□□□ -0.39
RNF4-215ENST00000511843 ENO2P09104 434 aaPredicted RBP12.62□□□□□ -0.39
RNF4-215ENST00000511843 NCF1P14598 390 aaPredicted RBP12.62□□□□□ -0.39
RNF4-215ENST00000511843 IL1RNP18510 177 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 CCND1P24385 295 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 CD97P48960 835 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 EFNA3P52797 238 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 RPS15AP62244 130 aaKnown RBP12.62□□□□□ -0.39
RNF4-215ENST00000511843 GUCY2DQ02846 1103 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 CAV1Q03135 178 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 RELAQ04206 551 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 DSG2Q14126 1118 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 USP10Q14694 798 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms