RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 STX16-NPEPL1H3BU86 382 aa6.13□□□□□ -1.43
USP53-206ENST00000510737 STX16O14662 325 aa6.13□□□□□ -1.43
USP53-206ENST00000510737 MED24O75448 989 aa6.13□□□□□ -1.43
USP53-206ENST00000510737 BAG4O95429 457 aaKnown RBP6.13□□□□□ -1.43
USP53-206ENST00000510737 ATP1A1P05023 1023 aaKnown RBP6.13□□□□□ -1.43
USP53-206ENST00000510737 IGHV4-34P06331 123 aa6.13□□□□□ -1.43
USP53-206ENST00000510737 HLA-DOBP13765 273 aa6.13□□□□□ -1.43
USP53-206ENST00000510737 MCM3P25205 808 aa6.13□□□□□ -1.43
USP53-206ENST00000510737 EPHA8P29322 1005 aaPredicted RBP6.13□□□□□ -1.43
USP53-206ENST00000510737 CDKN1AP38936 164 aa6.13□□□□□ -1.43
USP53-206ENST00000510737 RXRGP48443 463 aa6.13□□□□□ -1.43
USP53-206ENST00000510737 DUSP3P51452 185 aaPredicted RBP6.13□□□□□ -1.43
USP53-206ENST00000510737 C21orf59P57076 290 aa6.13□□□□□ -1.43
USP53-206ENST00000510737 TBX4P57082 545 aa6.13□□□□□ -1.43
USP53-206ENST00000510737 AKAP17AQ02040 695 aaKnown RBP6.13□□□□□ -1.43
USP53-206ENST00000510737 NUCB1Q02818 461 aa6.13□□□□□ -1.43
USP53-206ENST00000510737 ENPP2Q13822 863 aa6.13□□□□□ -1.43
USP53-206ENST00000510737 PDIA5Q14554 519 aa6.13□□□□□ -1.43
USP53-206ENST00000510737 SYT16Q17RD7 645 aa6.13□□□□□ -1.43
USP53-206ENST00000510737 ATP13A5Q4VNC0 1218 aa6.13□□□□□ -1.43
USP53-206ENST00000510737 PLEKHA7Q6IQ23 1121 aa6.13□□□□□ -1.43
USP53-206ENST00000510737 METTL23Q86XA0 190 aa6.13□□□□□ -1.43
USP53-206ENST00000510737 CACUL1Q86Y37 369 aa6.13□□□□□ -1.43
USP53-206ENST00000510737 SMC5Q8IY18 1101 aa6.13□□□□□ -1.43
USP53-206ENST00000510737 SCFD1Q8WVM8 642 aa6.13□□□□□ -1.43
USP53-206ENST00000510737 IFT74Q96LB3 600 aa6.13□□□□□ -1.43
USP53-206ENST00000510737 LSG1Q9H089 658 aaKnown RBP6.13□□□□□ -1.43
USP53-206ENST00000510737 DNAJC17Q9NVM6 304 aaKnown RBP6.13□□□□□ -1.43
USP53-206ENST00000510737 IFT80Q9P2H3 777 aaPredicted RBP6.13□□□□□ -1.43
USP53-206ENST00000510737 GTF3C4Q9UKN8 822 aa6.13□□□□□ -1.43
USP53-206ENST00000510737 NAP1L2Q9ULW6 460 aaPredicted RBP6.13□□□□□ -1.43
USP53-206ENST00000510737 CSMD2Q7Z408 3487 aa6.13□□□□□ -1.43
USP53-206ENST00000510737 OBSL1O75147 1896 aa6.13□□□□□ -1.43
USP53-206ENST00000510737 A0A1W2PR77 199 aa6.12□□□□□ -1.43
USP53-206ENST00000510737 CCDC169A6NNP5 214 aa6.12□□□□□ -1.43
USP53-206ENST00000510737 SEMA4FO95754 770 aa6.12□□□□□ -1.43
USP53-206ENST00000510737 OAS1P00973 400 aaKnown RBP6.12□□□□□ -1.43
USP53-206ENST00000510737 ADRB2P07550 413 aa6.12□□□□□ -1.43
USP53-206ENST00000510737 ACADMP11310 421 aa6.12□□□□□ -1.43
USP53-206ENST00000510737 GCFC2P16383 781 aaKnown RBP6.12□□□□□ -1.43
USP53-206ENST00000510737 PAX3P23760 479 aa6.12□□□□□ -1.43
USP53-206ENST00000510737 ACAT1P24752 427 aaKnown RBP6.12□□□□□ -1.43
USP53-206ENST00000510737 HNRNPH1P31943 449 aaKnown RBP6.12□□□□□ -1.43
USP53-206ENST00000510737 PEX3P56589 373 aa6.12□□□□□ -1.43
USP53-206ENST00000510737 RELQ04864 619 aaPredicted RBP6.12□□□□□ -1.43
USP53-206ENST00000510737 ISXQ2M1V0 245 aa6.12□□□□□ -1.43
USP53-206ENST00000510737 ADCK5Q3MIX3 580 aa6.12□□□□□ -1.43
USP53-206ENST00000510737 MAP9Q49MG5 647 aa6.12□□□□□ -1.43
USP53-206ENST00000510737 PRSS45Q7RTY3 260 aa6.12□□□□□ -1.43
USP53-206ENST00000510737 ODF3L1Q8IXM7 274 aa6.12□□□□□ -1.43
USP53-206ENST00000510737 ADGRF2Q8IZF7 708 aa6.12□□□□□ -1.43
USP53-206ENST00000510737 SLC25A45Q8N413 288 aa6.12□□□□□ -1.43
USP53-206ENST00000510737 PARP16Q8N5Y8 322 aa6.12□□□□□ -1.43
USP53-206ENST00000510737 HTR3CQ8WXA8 447 aa6.12□□□□□ -1.43
USP53-206ENST00000510737 OTUB2Q96DC9 234 aa6.12□□□□□ -1.43
USP53-206ENST00000510737 ATXN7L3BQ96GX2 97 aa6.12□□□□□ -1.43
USP53-206ENST00000510737 PYM1Q9BRP8 204 aaKnown RBP6.12□□□□□ -1.43
USP53-206ENST00000510737 KLHL1Q9NR64 748 aa6.12□□□□□ -1.43
USP53-206ENST00000510737 DDX43Q9NXZ2 648 aaKnown RBP6.12□□□□□ -1.43
USP53-206ENST00000510737 MYOFQ9NZM1 2061 aa6.12□□□□□ -1.43
USP53-206ENST00000510737 THAP10Q9P2Z0 257 aaPredicted RBP6.12□□□□□ -1.43
USP53-206ENST00000510737 TCF19Q9Y242 345 aa6.12□□□□□ -1.43
USP53-206ENST00000510737 PHLPP2Q6ZVD8 1323 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 HSPB2A8KAH6 182 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 NEDD8-MDP1E9PL57 170 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 HCRTO43612 131 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 CACNG3O60359 315 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 SYNCRIPO60506 623 aaKnown RBP6.11□□□□□ -1.43
USP53-206ENST00000510737 TOM1L1O75674 476 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 TNFSF15O95150 251 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 CLTAP09496 248 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 THEGLP0DJG4 465 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 MBL2P11226 248 aaPredicted RBP6.11□□□□□ -1.43
USP53-206ENST00000510737 SRCP12931 536 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 IFNAR1P17181 557 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 ARRB1P49407 418 aaPredicted RBP6.11□□□□□ -1.43
USP53-206ENST00000510737 HDAC4P56524 1084 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 ERVK11-1P61568 191 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 MORC3Q14149 939 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 HSPB2Q16082 182 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 CFAP221Q4G0U5 840 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 JADE1Q6IE81 842 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 DAW1Q8N136 415 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 SSC4DQ8WTU2 575 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 KIFAP3Q92845 792 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 SNAPC3Q92966 411 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 SPATA17Q96L03 361 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 XPO6Q96QU8 1125 aaKnown RBP6.11□□□□□ -1.43
USP53-206ENST00000510737 ACBD6Q9BR61 282 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 FUCA2Q9BTY2 467 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 CCSER1Q9C0I3 900 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 ANAPC2Q9UJX6 822 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 KCNJ14Q9UNX9 436 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 AKAP9Q99996 3911 aa6.11□□□□□ -1.43
USP53-206ENST00000510737 PCNX1Q96RV3 2341 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 ARHGEF35A5YM69 484 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 KPNA7A9QM74 516 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 TLR4O00206 839 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 YKT6O15498 198 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 CLDN3O15551 220 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms