RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 C17orf64Q86WR6 236 aa21.84■■□□□ 1.09
SNF8-209ENST00000510558 AMER3Q8N944 861 aa21.84■■□□□ 1.09
SNF8-209ENST00000510558 GALNT11Q8NCW6 608 aa21.84■■□□□ 1.09
SNF8-209ENST00000510558 ALKBH8Q96BT7 664 aaKnown RBP21.84■■□□□ 1.09
SNF8-209ENST00000510558 OLFM1Q99784 485 aa21.84■■□□□ 1.09
SNF8-209ENST00000510558 MESP1Q9BRJ9 268 aa21.84■■□□□ 1.09
SNF8-209ENST00000510558 YIPF2Q9BWQ6 316 aa21.84■■□□□ 1.09
SNF8-209ENST00000510558 DRC3Q9H069 523 aa21.84■■□□□ 1.09
SNF8-209ENST00000510558 VPS4AQ9UN37 437 aa21.84■■□□□ 1.09
SNF8-209ENST00000510558 SNX24Q9Y343 169 aa21.84■■□□□ 1.09
SNF8-209ENST00000510558 RP1L1Q8IWN7 2480 aaPredicted RBP21.83■■□□□ 1.09
SNF8-209ENST00000510558 RELNP78509 3460 aa21.83■■□□□ 1.09
SNF8-209ENST00000510558 A0A0A6YYC8 382 aaPredicted RBP21.83■■□□□ 1.09
SNF8-209ENST00000510558 CLEC18AA5D8T8 446 aa21.83■■□□□ 1.09
SNF8-209ENST00000510558 E7ESA3 106 aa21.83■■□□□ 1.09
SNF8-209ENST00000510558 I3L1I5 382 aaPredicted RBP21.83■■□□□ 1.09
SNF8-209ENST00000510558 STATHP02808 62 aa21.83■■□□□ 1.09
SNF8-209ENST00000510558 ANXA5P08758 320 aa21.83■■□□□ 1.09
SNF8-209ENST00000510558 HIST1H2AGP0C0S8 130 aaPredicted RBP21.83■■□□□ 1.09
SNF8-209ENST00000510558 HIST1H2ADP20671 130 aa21.83■■□□□ 1.09
SNF8-209ENST00000510558 CCND1P24385 295 aa21.83■■□□□ 1.09
SNF8-209ENST00000510558 SLC26A3P40879 764 aa21.83■■□□□ 1.09
SNF8-209ENST00000510558 RPS15AP62244 130 aaKnown RBP21.83■■□□□ 1.09
SNF8-209ENST00000510558 CSNK1G2P78368 415 aa21.83■■□□□ 1.09
SNF8-209ENST00000510558 MGAT5Q09328 741 aa21.83■■□□□ 1.09
SNF8-209ENST00000510558 FAM53BQ14153 422 aa21.83■■□□□ 1.09
SNF8-209ENST00000510558 NDUFA9Q16795 377 aa21.83■■□□□ 1.09
SNF8-209ENST00000510558 CLEC18BQ6UXF7 455 aa21.83■■□□□ 1.09
SNF8-209ENST00000510558 LAPTM4BQ86VI4 370 aa21.83■■□□□ 1.09
SNF8-209ENST00000510558 PARP9Q8IXQ6 854 aa21.83■■□□□ 1.09
SNF8-209ENST00000510558 CLEC18CQ8NCF0 446 aa21.83■■□□□ 1.09
SNF8-209ENST00000510558 FBXO36Q8NEA4 188 aa21.83■■□□□ 1.09
SNF8-209ENST00000510558 TM9SF4Q92544 642 aa21.83■■□□□ 1.09
SNF8-209ENST00000510558 HIST1H2AHQ96KK5 128 aa21.83■■□□□ 1.09
SNF8-209ENST00000510558 HIST1H2AJQ99878 128 aa21.83■■□□□ 1.09
SNF8-209ENST00000510558 H2AFJQ9BTM1 129 aa21.83■■□□□ 1.09
SNF8-209ENST00000510558 SGPP1Q9BX95 441 aa21.83■■□□□ 1.09
SNF8-209ENST00000510558 ZBTB20Q9HC78 741 aaPredicted RBP21.83■■□□□ 1.09
SNF8-209ENST00000510558 C14orf105Q9NVL8 296 aa21.83■■□□□ 1.09
SNF8-209ENST00000510558 ZFATQ9P243 1243 aa21.83■■□□□ 1.09
SNF8-209ENST00000510558 B3GNT3Q9Y2A9 372 aa21.83■■□□□ 1.09
SNF8-209ENST00000510558 PSAT1Q9Y617 370 aa21.83■■□□□ 1.09
SNF8-209ENST00000510558 HECTD1Q9ULT8 2610 aa21.83■■□□□ 1.08
SNF8-209ENST00000510558 PABPN1LA6NDY0 278 aaKnown RBP21.82■■□□□ 1.08
SNF8-209ENST00000510558 MAP2K7O14733 419 aa21.82■■□□□ 1.08
SNF8-209ENST00000510558 ACPPP15309 386 aa21.82■■□□□ 1.08
SNF8-209ENST00000510558 UQCRFS1P47985 274 aa21.82■■□□□ 1.08
SNF8-209ENST00000510558 PLEKHN1Q494U1 663 aaPredicted RBP21.82■■□□□ 1.08
SNF8-209ENST00000510558 IRAK1BP1Q5VVH5 260 aa21.82■■□□□ 1.08
SNF8-209ENST00000510558 LCTLQ6UWM7 567 aa21.82■■□□□ 1.08
SNF8-209ENST00000510558 VN1R4Q7Z5H5 301 aa21.82■■□□□ 1.08
SNF8-209ENST00000510558 ZADH2Q8N4Q0 377 aa21.82■■□□□ 1.08
SNF8-209ENST00000510558 TRIM54Q9BYV2 358 aa21.82■■□□□ 1.08
SNF8-209ENST00000510558 MKKSQ9NPJ1 570 aaPredicted RBP21.82■■□□□ 1.08
SNF8-209ENST00000510558 ARL15Q9NXU5 204 aa21.82■■□□□ 1.08
SNF8-209ENST00000510558 MRPS2Q9Y399 296 aaKnown RBP21.82■■□□□ 1.08
SNF8-209ENST00000510558 SCN3AQ9NY46 2000 aa21.81■■□□□ 1.08
SNF8-209ENST00000510558 KCNE1BA0A087WTH5 132 aa21.81■■□□□ 1.08
SNF8-209ENST00000510558 IDSB3KWA1 339 aa21.81■■□□□ 1.08
SNF8-209ENST00000510558 NDC80O14777 642 aa21.81■■□□□ 1.08
SNF8-209ENST00000510558 HPP00738 406 aa21.81■■□□□ 1.08
SNF8-209ENST00000510558 CDH1P12830 882 aa21.81■■□□□ 1.08
SNF8-209ENST00000510558 GNLYP22749 145 aa21.81■■□□□ 1.08
SNF8-209ENST00000510558 EMP2P54851 167 aa21.81■■□□□ 1.08
SNF8-209ENST00000510558 AP1S2P56377 157 aa21.81■■□□□ 1.08
SNF8-209ENST00000510558 SNRPNP63162 240 aaKnown RBP21.81■■□□□ 1.08
SNF8-209ENST00000510558 MRPS25P82663 173 aaKnown RBP21.81■■□□□ 1.08
SNF8-209ENST00000510558 SRSF1Q07955 248 aaKnown RBP eCLIP21.81■■□□□ 1.089e-7■■■■□ 24.1
SNF8-209ENST00000510558 ZXDCQ2QGD7 858 aaPredicted RBP21.81■■□□□ 1.08
SNF8-209ENST00000510558 ATG9BQ674R7 924 aa21.81■■□□□ 1.08
SNF8-209ENST00000510558 CAPN13Q6MZZ7 669 aaPredicted RBP21.81■■□□□ 1.08
SNF8-209ENST00000510558 C8orf44Q96CB5 159 aa21.81■■□□□ 1.08
SNF8-209ENST00000510558 THAP11Q96EK4 314 aa21.81■■□□□ 1.08
SNF8-209ENST00000510558 TGIF2Q9GZN2 237 aa21.81■■□□□ 1.08
SNF8-209ENST00000510558 LHPPQ9H008 270 aa21.81■■□□□ 1.08
SNF8-209ENST00000510558 MOCS1Q9NZB8 636 aa21.81■■□□□ 1.08
SNF8-209ENST00000510558 VARSP26640 1264 aaKnown RBP21.8■■□□□ 1.08
SNF8-209ENST00000510558 AVPR1BP47901 424 aa21.8■■□□□ 1.08
SNF8-209ENST00000510558 Q0VFX4 171 aa21.8■■□□□ 1.08
SNF8-209ENST00000510558 SYT16Q17RD7 645 aa21.8■■□□□ 1.08
SNF8-209ENST00000510558 AGAP7PQ5VUJ5 663 aa21.8■■□□□ 1.08
SNF8-209ENST00000510558 DUPD1Q68J44 220 aa21.8■■□□□ 1.08
SNF8-209ENST00000510558 STRA8Q7Z7C7 330 aa21.8■■□□□ 1.08
SNF8-209ENST00000510558 ZC3HC1Q86WB0 502 aaKnown RBP21.8■■□□□ 1.08
SNF8-209ENST00000510558 IQCKQ8N0W5 287 aa21.8■■□□□ 1.08
SNF8-209ENST00000510558 FAM26EQ8N5C1 309 aa21.8■■□□□ 1.08
SNF8-209ENST00000510558 BBOF1Q8ND07 529 aa21.8■■□□□ 1.08
SNF8-209ENST00000510558 OR56A3Q8NH54 315 aa21.8■■□□□ 1.08
SNF8-209ENST00000510558 PYCR2Q96C36 320 aa21.8■■□□□ 1.08
SNF8-209ENST00000510558 THOC3Q96J01 351 aaKnown RBP21.8■■□□□ 1.08
SNF8-209ENST00000510558 AGAP4Q96P64 663 aa21.8■■□□□ 1.08
SNF8-209ENST00000510558 HAUS8Q9BT25 410 aa21.8■■□□□ 1.08
SNF8-209ENST00000510558 ILKAPQ9H0C8 392 aaPredicted RBP21.8■■□□□ 1.08
SNF8-209ENST00000510558 ZNF160Q9HCG1 818 aa21.8■■□□□ 1.08
SNF8-209ENST00000510558 MAP10Q9P2G4 905 aa21.8■■□□□ 1.08
SNF8-209ENST00000510558 CNTRLQ7Z7A1 2325 aa21.79■■□□□ 1.08
SNF8-209ENST00000510558 ESPL1Q14674 2120 aa21.79■■□□□ 1.08
SNF8-209ENST00000510558 FEZF1A0PJY2 475 aa21.79■■□□□ 1.08
SNF8-209ENST00000510558 FAM187AA6NFU0 413 aa21.79■■□□□ 1.08
SNF8-209ENST00000510558 ENO2P09104 434 aaPredicted RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms