RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 UGT8Q16880 541 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 FAM219BQ5XKK7 198 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 BORAQ6PGQ7 559 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 THOC6Q86W42 341 aaKnown RBP12.93□□□□□ -0.34
SNF8-206ENST00000509989 ZNF843Q8N446 348 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 CSNK1A1LQ8N752 337 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 KCT2Q8NC54 265 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 RHBDF1Q96CC6 855 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 HIST1H2AHQ96KK5 128 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 HIST1H2AJQ99878 128 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 H2AFJQ9BTM1 129 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 EFHD1Q9BUP0 239 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 GPR87Q9BY21 358 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 TXLNGYQ9BZA5 131 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 AICDAQ9GZX7 198 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 ALG9Q9H6U8 611 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 TXLNGQ9NUQ3 528 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 TMEM184CQ9NVA4 438 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 ANKMY1Q9P2S6 941 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 SNX7Q9UNH6 387 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 PTRH2Q9Y3E5 179 aaKnown RBP12.93□□□□□ -0.34
SNF8-206ENST00000509989 A0A0A6YYC8 382 aaPredicted RBP12.92□□□□□ -0.34
SNF8-206ENST00000509989 A0A1B0GX78 115 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 LRRC14BA6NHZ5 514 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 ARGFXA6NJG6 315 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 FOXO6A8MYZ6 492 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 POC1B-GALNT4F8VUJ3 575 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 I3L1I5 382 aaPredicted RBP12.92□□□□□ -0.34
SNF8-206ENST00000509989 SRPX2O60687 465 aaPredicted RBP12.92□□□□□ -0.34
SNF8-206ENST00000509989 CCNDBP1O95273 360 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 PDGFAP04085 211 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 C2P06681 752 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 ENO2P09104 434 aaPredicted RBP12.92□□□□□ -0.34
SNF8-206ENST00000509989 HBQ1P09105 142 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 EZRP15311 586 aaKnown RBP12.92□□□□□ -0.34
SNF8-206ENST00000509989 EPORP19235 508 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 AGXTP21549 392 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 OTX2P32243 289 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 SLC6A12P48065 614 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 AP1S2P56377 157 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 MAT1AQ00266 395 aaKnown RBP12.92□□□□□ -0.34
SNF8-206ENST00000509989 TCTE1Q5JU00 501 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 TEX35Q5T0J7 233 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 ADNP2Q6IQ32 1131 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 CAPN13Q6MZZ7 669 aaPredicted RBP12.92□□□□□ -0.34
SNF8-206ENST00000509989 SYVN1Q86TM6 617 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 ISCA2Q86U28 154 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 LAPTM4BQ86VI4 370 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 C17orf64Q86WR6 236 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 PRSS58Q8IYP2 241 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 AMER3Q8N944 861 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 TTC29Q8NA56 475 aaPredicted RBP12.92□□□□□ -0.34
SNF8-206ENST00000509989 PROKR1Q8TCW9 393 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 DCAKDQ8WVC6 231 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 SLC44A1Q8WWI5 657 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 TM4SF19Q96DZ7 209 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 TSPAN17Q96FV3 270 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 CYTH2Q99418 400 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 PAFAH2Q99487 392 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 SPSB2Q99619 263 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 EGFL8Q99944 293 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 SOX17Q9H6I2 414 aaPredicted RBP12.92□□□□□ -0.34
SNF8-206ENST00000509989 SNX15Q9NRS6 342 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 IFT80Q9P2H3 777 aaPredicted RBP12.92□□□□□ -0.34
SNF8-206ENST00000509989 SRPK3Q9UPE1 567 aa12.92□□□□□ -0.34
SNF8-206ENST00000509989 OR2W5A6NFC9 320 aa12.91□□□□□ -0.34
SNF8-206ENST00000509989 C4orf51C9J302 202 aa12.91□□□□□ -0.34
SNF8-206ENST00000509989 PYCARD-AS1I3L0S3 204 aa12.91□□□□□ -0.34
SNF8-206ENST00000509989 UBXN8O00124 270 aa12.91□□□□□ -0.34
SNF8-206ENST00000509989 ONECUT2O95948 504 aa12.91□□□□□ -0.34
SNF8-206ENST00000509989 TFEBP19484 476 aa12.91□□□□□ -0.34
SNF8-206ENST00000509989 GLRBP48167 497 aa12.91□□□□□ -0.34
SNF8-206ENST00000509989 HSPA7P48741 367 aa12.91□□□□□ -0.34
SNF8-206ENST00000509989 AGTR2P50052 363 aa12.91□□□□□ -0.34
SNF8-206ENST00000509989 NAB1Q13506 487 aa12.91□□□□□ -0.34
SNF8-206ENST00000509989 ATP1A4Q13733 1029 aa12.91□□□□□ -0.34
SNF8-206ENST00000509989 NKG7Q16617 165 aa12.91□□□□□ -0.34
SNF8-206ENST00000509989 CRTC2Q53ET0 693 aaPredicted RBP12.91□□□□□ -0.34
SNF8-206ENST00000509989 VWA2Q5GFL6 755 aa12.91□□□□□ -0.34
SNF8-206ENST00000509989 RAPH1Q70E73 1250 aa12.91□□□□□ -0.34
SNF8-206ENST00000509989 OVCH1Q7RTY7 1134 aa12.91□□□□□ -0.34
SNF8-206ENST00000509989 PPP1R32Q7Z5V6 425 aa12.91□□□□□ -0.34
SNF8-206ENST00000509989 PDSS2Q86YH6 399 aa12.91□□□□□ -0.34
SNF8-206ENST00000509989 ANKRD53Q8N9V6 530 aa12.91□□□□□ -0.34
SNF8-206ENST00000509989 OR4K1Q8NGD4 311 aa12.91□□□□□ -0.34
SNF8-206ENST00000509989 OR9A4Q8NGU2 314 aa12.91□□□□□ -0.34
SNF8-206ENST00000509989 ZCCHC10Q8TBK6 192 aa12.91□□□□□ -0.34
SNF8-206ENST00000509989 ANKRD7Q92527 254 aa12.91□□□□□ -0.34
SNF8-206ENST00000509989 CABS1Q96KC9 395 aa12.91□□□□□ -0.34
SNF8-206ENST00000509989 GPR78Q96P69 363 aa12.91□□□□□ -0.34
SNF8-206ENST00000509989 ATOH8Q96SQ7 321 aa12.91□□□□□ -0.34
SNF8-206ENST00000509989 ARHGAP9Q9BRR9 750 aa12.91□□□□□ -0.34
SNF8-206ENST00000509989 TRIM54Q9BYV2 358 aa12.91□□□□□ -0.34
SNF8-206ENST00000509989 ZNF71Q9NQZ8 489 aaPredicted RBP12.91□□□□□ -0.34
SNF8-206ENST00000509989 C9J4A7 227 aa12.9□□□□□ -0.34
SNF8-206ENST00000509989 RIPK2O43353 540 aa12.9□□□□□ -0.34
SNF8-206ENST00000509989 JRKO75564 520 aa12.9□□□□□ -0.34
SNF8-206ENST00000509989 WDR47O94967 919 aa12.9□□□□□ -0.34
SNF8-206ENST00000509989 ANXA5P08758 320 aa12.9□□□□□ -0.34
SNF8-206ENST00000509989 MTHFD2P13995 350 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms