RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 MFSD4BQ5TF39 518 aa14.61□□□□□ -0.07
TPM3-219ENST00000509409 PIWIL4Q7Z3Z4 852 aaKnown RBP14.61□□□□□ -0.07
TPM3-219ENST00000509409 SIRT6Q8N6T7 355 aa14.61□□□□□ -0.07
TPM3-219ENST00000509409 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.61□□□□□ -0.07
TPM3-219ENST00000509409 GABPB2Q8TAK5 448 aaPredicted RBP14.61□□□□□ -0.07
TPM3-219ENST00000509409 MCOLN3Q8TDD5 553 aa14.61□□□□□ -0.07
TPM3-219ENST00000509409 FAR1Q8WVX9 515 aa14.61□□□□□ -0.07
TPM3-219ENST00000509409 METTL21AQ8WXB1 218 aa14.61□□□□□ -0.07
TPM3-219ENST00000509409 ALKBH8Q96BT7 664 aaKnown RBP14.61□□□□□ -0.07
TPM3-219ENST00000509409 SIGLEC10Q96LC7 697 aa14.61□□□□□ -0.07
TPM3-219ENST00000509409 FAM167BQ9BTA0 163 aa14.61□□□□□ -0.07
TPM3-219ENST00000509409 AARSD1Q9BTE6 412 aaKnown RBP14.61□□□□□ -0.07
TPM3-219ENST00000509409 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.61□□□□□ -0.07
TPM3-219ENST00000509409 SYNPO2LQ9H987 977 aa14.61□□□□□ -0.07
TPM3-219ENST00000509409 TMEM184CQ9NVA4 438 aa14.61□□□□□ -0.07
TPM3-219ENST00000509409 RIC8BQ9NVN3 520 aa14.61□□□□□ -0.07
TPM3-219ENST00000509409 TRMT6Q9UJA5 497 aaKnown RBP14.61□□□□□ -0.07
TPM3-219ENST00000509409 IGHV1-45A0A0A0MS14 117 aa14.6□□□□□ -0.07
TPM3-219ENST00000509409 GOLGA6L10A0A0M3HER8 536 aa14.6□□□□□ -0.07
TPM3-219ENST00000509409 PGRMC1O00264 195 aaKnown RBP14.6□□□□□ -0.07
TPM3-219ENST00000509409 PCDH17O14917 1159 aa14.6□□□□□ -0.07
TPM3-219ENST00000509409 P2RX6O15547 441 aa14.6□□□□□ -0.07
TPM3-219ENST00000509409 BMP10O95393 424 aa14.6□□□□□ -0.07
TPM3-219ENST00000509409 CLDN1O95832 211 aa14.6□□□□□ -0.07
TPM3-219ENST00000509409 ICAM2P13598 275 aa14.6□□□□□ -0.07
TPM3-219ENST00000509409 EDN3P14138 238 aa14.6□□□□□ -0.07
TPM3-219ENST00000509409 FDXRP22570 491 aa14.6□□□□□ -0.07
TPM3-219ENST00000509409 HRH2P25021 359 aa14.6□□□□□ -0.07
TPM3-219ENST00000509409 IMPA1P29218 277 aa14.6□□□□□ -0.07
TPM3-219ENST00000509409 SKIV2L2P42285 1042 aaKnown RBP14.6□□□□□ -0.07
TPM3-219ENST00000509409 RGS4P49798 205 aa14.6□□□□□ -0.07
TPM3-219ENST00000509409 FAM53BQ14153 422 aa14.6□□□□□ -0.07
TPM3-219ENST00000509409 PPP1R7Q15435 360 aa14.6□□□□□ -0.07
TPM3-219ENST00000509409 CYP1B1Q16678 543 aa14.6□□□□□ -0.07
TPM3-219ENST00000509409 PPIL6Q8IXY8 311 aa14.6□□□□□ -0.07
TPM3-219ENST00000509409 BCORP1Q8N888 145 aa14.6□□□□□ -0.07
TPM3-219ENST00000509409 AMER3Q8N944 861 aa14.6□□□□□ -0.07
TPM3-219ENST00000509409 NAT8LQ8N9F0 302 aa14.6□□□□□ -0.07
TPM3-219ENST00000509409 CD200R1Q8TD46 325 aa14.6□□□□□ -0.07
TPM3-219ENST00000509409 CCDC138Q96M89 665 aa14.6□□□□□ -0.07
TPM3-219ENST00000509409 TGIF2Q9GZN2 237 aa14.6□□□□□ -0.07
TPM3-219ENST00000509409 CCDC177Q9NQR7 707 aaPredicted RBP14.6□□□□□ -0.07
TPM3-219ENST00000509409 MED16Q9Y2X0 877 aa14.6□□□□□ -0.07
TPM3-219ENST00000509409 MRPS2Q9Y399 296 aaKnown RBP14.6□□□□□ -0.07
TPM3-219ENST00000509409 LRRTM2O43300 516 aa14.59□□□□□ -0.07
TPM3-219ENST00000509409 F10P00742 488 aa14.59□□□□□ -0.07
TPM3-219ENST00000509409 CELA2AP08217 269 aa14.59□□□□□ -0.07
TPM3-219ENST00000509409 RPS15AP62244 130 aaKnown RBP14.59□□□□□ -0.07
TPM3-219ENST00000509409 AP2B1P63010 937 aa14.59□□□□□ -0.07
TPM3-219ENST00000509409 ZNF787Q6DD87 383 aa14.59□□□□□ -0.07
TPM3-219ENST00000509409 RPUSD3Q6P087 351 aaKnown RBP14.59□□□□□ -0.07
TPM3-219ENST00000509409 LRRC56Q8IYG6 542 aaPredicted RBP14.59□□□□□ -0.07
TPM3-219ENST00000509409 AGGF1Q8N302 714 aaeCLIP14.59□□□□□ -0.071e-7■□□□□ 11.2
TPM3-219ENST00000509409 OR9A4Q8NGU2 314 aa14.59□□□□□ -0.07
TPM3-219ENST00000509409 EEF1AKMT1Q8WVE0 214 aa14.59□□□□□ -0.07
TPM3-219ENST00000509409 NDNQ99608 321 aa14.59□□□□□ -0.07
TPM3-219ENST00000509409 MACROD1Q9BQ69 325 aa14.59□□□□□ -0.07
TPM3-219ENST00000509409 ZNF700Q9H0M5 742 aa14.59□□□□□ -0.07
TPM3-219ENST00000509409 PCBD2Q9H0N5 130 aa14.59□□□□□ -0.07
TPM3-219ENST00000509409 OLAHQ9NV23 265 aa14.59□□□□□ -0.07
TPM3-219ENST00000509409 TAS2R13Q9NYV9 303 aa14.59□□□□□ -0.07
TPM3-219ENST00000509409 NEU2Q9Y3R4 380 aa14.59□□□□□ -0.07
TPM3-219ENST00000509409 MDC1Q14676 2089 aaKnown RBP14.58□□□□□ -0.08
TPM3-219ENST00000509409 TRAV17A0A0B4J275 112 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 PABPN1LA6NDY0 278 aaKnown RBP14.58□□□□□ -0.08
TPM3-219ENST00000509409 EIF3FO00303 357 aaPredicted RBP14.58□□□□□ -0.08
TPM3-219ENST00000509409 C8GP07360 202 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 C8orf89P0DMQ9 161 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 MYBL2P10244 700 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 ITGAMP11215 1152 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 PGAM1P18669 254 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 SOX11P35716 441 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 MAGEA3P43357 314 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 FNTAP49354 379 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 PER3P56645 1201 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 NAE1Q13564 534 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 MINDY4Q4G0A6 757 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 LRRC8EQ6NSJ5 796 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 TMEM205Q6UW68 189 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 RIPOR1Q6ZS17 1223 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 C17orf64Q86WR6 236 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 ZC3H7AQ8IWR0 971 aaKnown RBP14.58□□□□□ -0.08
TPM3-219ENST00000509409 MYO1HQ8N1T3 1032 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 CAMKVQ8NCB2 501 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 SUN3Q8TAQ9 357 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 PSMF1Q92530 271 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 HAS2Q92819 552 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 THAP11Q96EK4 314 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 OSBPL9Q96SU4 736 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 ATG10Q9H0Y0 220 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 PARVBQ9HBI1 364 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 ASIC3Q9UHC3 531 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 ADAMTS6Q9UKP5 1117 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 PDE10AQ9Y233 779 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 CNTRLQ7Z7A1 2325 aa14.58□□□□□ -0.08
TPM3-219ENST00000509409 NOTCH2Q04721 2471 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 LOC102723996A0A087X1L8 192 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 FEZF1A0PJY2 475 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 A8MUI8 341 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 H0YIG0 161 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms