RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 METRNLQ641Q3 311 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 DOK6Q6PKX4 331 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 ABRAXAS1Q6UWZ7 409 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 NEK10Q6ZWH5 1172 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 CHST15Q7LFX5 561 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 RD3Q7Z3Z2 195 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 TAF8Q7Z7C8 310 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 C11orf96Q7Z7L8 435 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 TRIM74Q86UV6 250 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 ZC3HC1Q86WB0 502 aaKnown RBP5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 ZNF547Q8IVP9 402 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 DENND6AQ8IWF6 608 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 CTAGE3PQ8IX95 158 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 RIBC1Q8N443 379 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 MINDY1Q8N5J2 469 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 ZNF548Q8NEK5 533 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 OR6C4Q8NGE1 309 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 PPP1R14CQ8TAE6 165 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 SAP25Q8TEE9 199 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 ZFPM2Q8WW38 1151 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 ANKRD7Q92527 254 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 TSACCQ96A04 125 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 TMEM159Q96B96 161 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 SGF29Q96ES7 293 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 PDXPQ96GD0 296 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 WWC2-AS2Q96NR7 200 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 BIRC8Q96P09 236 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 RBBP8Q99708 897 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 EDEM2Q9BV94 578 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 ROPN1BQ9BZX4 212 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 ROPN1Q9HAT0 212 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 POPDC3Q9HBV1 291 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 SYTL2Q9HCH5 934 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 TM7SF3Q9NS93 570 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 ARGLU1Q9NWB6 273 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 NLGN3Q9NZ94 848 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 MARCH4Q9P2E8 410 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 SLC24A2Q9UI40 661 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 TUBD1Q9UJT1 453 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 VWA7Q9Y334 891 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 HEBP2Q9Y5Z4 205 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 V9GYY5 206 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 ASXL3Q9C0F0 2248 aa5.35□□□□□ -1.55
HMGB1P44-201ENST00000508597 COL5A1P20908 1838 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 BPTFQ12830 3046 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 RP1P56715 2156 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 IQANK1A0A1B0GTG1 560 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 EXOC1LA0A1B0GW35 172 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 SLC5A10A0PJK1 596 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 OR2AG2A6NM03 316 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 GOLGA8KD6RF30 607 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 GOLGA8TH3BQL2 631 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 IFRD1O00458 451 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 CDX4O14627 284 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 PRRG2O14669 202 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 YY2O15391 372 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 SGTAO43765 313 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 OR1I1O60431 355 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 MTX2O75431 263 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 GPC4O75487 556 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 HAUS5O94927 633 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 SLCO2B1O94956 709 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 TRIM16O95361 564 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 C1QAP02745 245 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 RPN2P04844 631 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 NUDT17P0C025 328 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 PRSS56P0CW18 603 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 CDK4P11802 303 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 ACP5P13686 325 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 F3P13726 295 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 XRCC1P18887 633 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 CHRM3P20309 590 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 GABRB3P28472 473 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 CRABP2P29373 138 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 FMO4P31512 558 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 CA5AP35218 305 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 SLC26A3P40879 764 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 ACTR1BP42025 376 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 MSH2P43246 934 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 RGS4P49798 205 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 LIMK2P53671 638 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 SLC12A2P55011 1212 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 ACTR1AP61163 376 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 MPP1Q00013 466 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 SLC29A2Q14542 456 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 MLC1Q15049 377 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 SHBQ15464 509 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 UAP1L1Q3KQV9 507 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 FAM153CQ494X1 144 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 ZNF658BQ4V348 819 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 KHDC1Q4VXA5 237 aaKnown RBP5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 LAYNQ6UX15 382 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 DET1Q7L5Y6 550 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 ASCL5Q7RTU5 278 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 OTOAQ7RTW8 1153 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 SLC9B2Q86UD5 537 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 TDRPQ86YL5 185 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 GLB1L2Q8IW92 636 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 UNC5BQ8IZJ1 945 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms