RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 HIST2H2ACQ16777 129 aaPredicted RBP8.75□□□□□ -1.01
NUP54-207ENST00000508583 PFKFB4Q16877 469 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 MUM1Q2TAK8 710 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 DEFB110Q30KQ9 67 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 CCDC153Q494R4 210 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 TECRLQ5HYJ1 363 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 HIST2H2AA3Q6FI13 130 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 RHBDD2Q6NTF9 364 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 PRMT9Q6P2P2 845 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 NXPE4Q6UWF7 544 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 TMPRSS11BQ86T26 416 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 ZFAND4Q86XD8 727 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 SLC22A9Q8IVM8 553 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 SPACA3Q8IXA5 215 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 FAM20CQ8IXL6 584 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 CSNK1A1LQ8N752 337 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 SNX31Q8N9S9 440 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 CAMKVQ8NCB2 501 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 EPS8L3Q8TE67 593 aaKnown RBP8.75□□□□□ -1.01
NUP54-207ENST00000508583 NEIL2Q969S2 332 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 UBE2E3Q969T4 207 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 PMEPA1Q969W9 287 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 MVB12AQ96EY5 273 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 MAGEB10Q96LZ2 347 aaPredicted RBP8.75□□□□□ -1.01
NUP54-207ENST00000508583 ZNF285Q96NJ3 590 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 CCNL2Q96S94 520 aaPredicted RBP8.75□□□□□ -1.01
NUP54-207ENST00000508583 RUFY1Q96T51 708 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 EFCAB11Q9BUY7 163 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 TMEM109Q9BVC6 243 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 SARGQ9BW04 601 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 GPR87Q9BY21 358 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 CD244Q9BZW8 370 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 GPN2Q9H9Y4 310 aaPredicted RBP8.75□□□□□ -1.01
NUP54-207ENST00000508583 WDR70Q9NW82 654 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 CPSF2Q9P2I0 782 aaKnown RBP8.75□□□□□ -1.01
NUP54-207ENST00000508583 CDC14AQ9UNH5 594 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 PADI2Q9Y2J8 665 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 KLHL20Q9Y2M5 609 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 SEC16AO15027 2179 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 IGKV1-8A0A0C4DH67 115 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 A0A1B0GX78 115 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 HYKKA2RU49 373 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 GOLGA6L10A6NI86 522 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 H0YGG7 62 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 MEN1O00255 615 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 COPEO14579 308 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 MAP2K7O14733 419 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 KLK8O60259 260 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 UGDHO60701 494 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 CTSVO60911 334 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 NTRK1P04629 796 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 EIF2S1P05198 315 aaKnown RBP8.74□□□□□ -1.01
NUP54-207ENST00000508583 PYGBP11216 843 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 SERPINB1P30740 379 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 AHRP35869 848 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 GABRA4P48169 554 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 HSPA7P48741 367 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 ARF3P61204 181 aaPredicted RBP8.74□□□□□ -1.01
NUP54-207ENST00000508583 RPS15P62841 145 aaKnown RBP8.74□□□□□ -1.01
NUP54-207ENST00000508583 CSNK1G2P78368 415 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 DCDP81605 110 aaKnown RBP8.74□□□□□ -1.01
NUP54-207ENST00000508583 PWP1Q13610 501 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 NAA30Q147X3 362 aaPredicted RBP8.74□□□□□ -1.01
NUP54-207ENST00000508583 SETDB1Q15047 1291 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 PCBP2Q15366 365 aaKnown RBP eCLIP8.74□□□□□ -1.01
NUP54-207ENST00000508583 TBCCQ15814 346 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 KRT71Q3SY84 523 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 WASHC2DQ5SRD0 308 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 ATG9BQ674R7 924 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 DSELQ8IZU8 1212 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 PLD6Q8N2A8 252 aaKnown RBP8.74□□□□□ -1.01
NUP54-207ENST00000508583 GALNT6Q8NCL4 622 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 TRPV3Q8NET8 790 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 OR4K1Q8NGD4 311 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 RDH11Q8TC12 318 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 HNRNPLLQ8WVV9 542 aaKnown RBP8.74□□□□□ -1.01
NUP54-207ENST00000508583 SREK1Q8WXA9 508 aaKnown RBP8.74□□□□□ -1.01
NUP54-207ENST00000508583 MR1Q95460 341 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 NKD1Q969G9 470 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 PTCD3Q96EY7 689 aaKnown RBP8.74□□□□□ -1.01
NUP54-207ENST00000508583 NAF1Q96HR8 494 aaKnown RBP8.74□□□□□ -1.01
NUP54-207ENST00000508583 GPR78Q96P69 363 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 OR2A5Q96R48 311 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 OR4K3Q96R72 315 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 SPRY4Q9C004 299 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 LHX9Q9NQ69 397 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 CUTCQ9NTM9 273 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 CUEDC1Q9NWM3 386 aaPredicted RBP8.74□□□□□ -1.01
NUP54-207ENST00000508583 LGALS13Q9UHV8 139 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 GPN3Q9UHW5 284 aaPredicted RBP8.74□□□□□ -1.01
NUP54-207ENST00000508583 ADGRE2Q9UHX3 823 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 GRID1Q9ULK0 1009 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 PLAAQ9Y263 795 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 STK38LQ9Y2H1 464 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 ZZEF1O43149 2961 aa8.74□□□□□ -1.01
NUP54-207ENST00000508583 USP24Q9UPU5 2620 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 MAP1BP46821 2468 aaKnown RBP8.73□□□□□ -1.01
NUP54-207ENST00000508583 MDC1Q14676 2089 aaKnown RBP8.73□□□□□ -1.01
NUP54-207ENST00000508583 ZFHX4Q86UP3 3567 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 SRRM3A6NNA2 597 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms