RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 BZW1Q7L1Q6 419 aaKnown RBP4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 HIST3H2AQ7L7L0 130 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 CLNKQ7Z7G1 428 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 HAPLN4Q86UW8 402 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 MISPQ8IVT2 679 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 CERS5Q8N5B7 392 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 COMMD1Q8N668 190 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 SCAIQ8N9R8 606 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 OR9K2Q8NGE7 335 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 LKAAEAR1Q8TD35 194 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 TRPC4APQ8TEL6 797 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 WIPF2Q8TF74 440 aaPredicted RBP4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 PDCD6IPQ8WUM4 868 aaKnown RBP4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 ASZ1Q8WWH4 475 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 FCGR1BQ92637 280 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 OSTF1Q92882 214 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 PGBD1Q96JS3 809 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 EGLN2Q96KS0 407 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 LRR1Q96L50 414 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 PANX1Q96RD7 426 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 TAAR6Q96RI8 345 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 BBS4Q96RK4 519 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 NPY6RQ99463 290 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 FEVQ99581 238 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 COQ7Q99807 217 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 ALKBH7Q9BT30 221 aaPredicted RBP4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 ALG12Q9BV10 488 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 TDRD1Q9BXT4 1180 aaKnown RBP4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 MRPL13Q9BYD1 178 aaKnown RBP4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 CALHM2Q9HA72 323 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 NEK6Q9HC98 313 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 IL26Q9NPH9 171 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 PIGVQ9NUD9 493 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 TMEM248Q9NWD8 314 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 TAS2R14Q9NYV8 317 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 TFCP2L1Q9NZI6 479 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 PDP1Q9P0J1 537 aaPredicted RBP4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 STX18Q9P2W9 335 aaKnown RBP4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 COPG2Q9UBF2 871 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 RNF150Q9ULK6 438 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 FAM96BQ9Y3D0 163 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 PKP3Q9Y446 797 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 LSM4Q9Y4Z0 139 aaKnown RBP4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 ABCC4O15439 1325 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 SF3B1O75533 1304 aaKnown RBP eCLIP4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 PRAMEF33A0A0G2JMD5 474 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 A0A1W2PS29 197 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 OR6C68A6NDL8 312 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 LINC00473A8K010 186 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 PRR23D1E9PI22 279 aaPredicted RBP4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 FOXE1O00358 373 aaPredicted RBP4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 DSCR3O14972 297 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 HDAC3O15379 428 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 NDUFS4O43181 175 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 AP5Z1O43299 807 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 DFNA5O60443 496 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 TSPAN1O60635 241 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 PRAMEF10O60809 474 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 CBX6O95503 412 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 CLPTM1O96005 669 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 MT-CYBP00156 380 aaPredicted RBP4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 MMP10P09238 476 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 DANCRP0C864 163 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 PRR23D2P0DMB1 279 aaPredicted RBP4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 SPP1P10451 314 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 FCGR2AP12318 317 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 HOXB9P17482 250 aaPredicted RBP4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 ITGALP20701 1170 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 PAICSP22234 425 aaKnown RBP4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 EEF1B2P24534 225 aaKnown RBP4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 EPHB2P29323 1055 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 PPP2R1AP30153 589 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 PPIFP30405 207 aaKnown RBP4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 CSTF2P33240 577 aaKnown RBP eCLIP4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 SHMT1P34896 483 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 ALDH3B1P43353 468 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 SLC1A6P48664 564 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 RGS4P49798 205 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 RPL23AP62750 156 aaKnown RBP4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 PPP2R2BQ00005 443 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 PIGFQ07326 219 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 ARHGAP1Q07960 439 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 ASPHQ12797 758 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 DNASE1L3Q13609 305 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 ENPP2Q13822 863 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 MVPQ14764 893 aaKnown RBP4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 STXBP2Q15833 593 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 FAM83EQ2M2I3 478 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 ZNF829Q3KNS6 432 aaPredicted RBP4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 PLEKHO1Q53GL0 409 aaPredicted RBP4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 SPANXN2Q5MJ10 180 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 RABGAP1LQ5R372 815 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 ZDHHC20Q5W0Z9 365 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 LRRC8EQ6NSJ5 796 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 ANKRD16Q6P6B7 361 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 FBXO46Q6PJ61 603 aaPredicted RBP4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 B3GLCTQ6Y288 498 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 TRILQ7L0X0 811 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 IZUMO1Q8IYV9 350 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 UBE2J2Q8N2K1 259 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms