RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 OR4D2P58180 307 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ENPEPQ07075 957 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 RASGEF1BQ0VAM2 473 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 SCAPQ12770 1279 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PIN1Q13526 163 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 RASA2Q15283 850 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 CEP78Q5JTW2 689 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 SPANXN3Q5MJ09 141 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 NIPAL1Q6NVV3 410 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PGM2L1Q6PCE3 622 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ZC3H7AQ8IWR0 971 aaKnown RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 KBTBD2Q8IY47 623 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF611Q8N823 705 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 TC2NQ8N9U0 490 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 OR1N1Q8NGS0 311 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF671Q8TAW3 534 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 MDM1Q8TC05 714 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 WDR60Q8WVS4 1066 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 CYGBQ8WWM9 190 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 EXTL1Q92935 676 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 DNAJC19Q96DA6 116 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 THOC3Q96J01 351 aaKnown RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 TEKT5Q96M29 485 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 BPIFA3Q9BQP9 254 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 FUT8Q9BYC5 575 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 NMRAL1Q9HBL8 299 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 TIGARQ9NQ88 270 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 MAT2BQ9NZL9 334 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PCYOX1Q9UHG3 505 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ADAM30Q9UKF2 790 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ACSL5Q9ULC5 683 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 C19orf67A6NJJ6 358 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 CCT8L1PA6NM43 557 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 M0R2N6 131 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 CACNG3O60359 315 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 CLDN7O95471 211 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ENO1P06733 434 aaKnown RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 NUDT17P0C025 328 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 TMEM253P0C7T8 217 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PKMP14618 531 aaKnown RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 OAS2P29728 719 aaKnown RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 SHMT2P34897 504 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 MECP2P51608 486 aaKnown RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 CCR8P51685 355 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 MANFP55145 182 aaKnown RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 BTN3A2P78410 334 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 MAMLD1Q13495 774 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 LAPTM5Q13571 262 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 TIGD6Q17RP2 521 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 FAM214AQ32MH5 1076 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ZCWPW2Q504Y3 356 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 RALGPS1Q5JS13 557 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 CAPN13Q6MZZ7 669 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 TMEM207Q6UWW9 146 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 C16orf89Q6UX73 402 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 THAP5Q7Z6K1 395 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 TMPRSS11BQ86T26 416 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 COMTD1Q86VU5 262 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF227Q86WZ6 799 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 SLC13A5Q86YT5 568 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 LRRC8AQ8IWT6 810 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PPIL6Q8IXY8 311 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PM20D2Q8IYS1 436 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 UNC5BQ8IZJ1 945 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PYROXD2Q8N2H3 581 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 TMEM132CQ8N3T6 1108 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 EME1Q96AY2 570 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 CSPG4P5Q96PW8 444 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 OLFM1Q99784 485 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 NTPCRQ9BSD7 190 aaKnown RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 TMEM120AQ9BXJ8 343 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 DDX47Q9H0S4 455 aaKnown RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PTGES2Q9H7Z7 377 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 TOR4AQ9NXH8 423 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 UPB1Q9UBR1 384 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 MARCOQ9UEW3 520 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 TMCO1Q9UM00 188 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PRAMEF33A0A0G2JMD5 474 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 A0A1W2PQJ5 194 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 MEN1O00255 615 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 PRAMEF10O60809 474 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 TRIM13O60858 407 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 CDH16O75309 829 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SCGB2A1O75556 95 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 PPM1BO75688 479 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 KLHL2O95198 593 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SERPINA3P01011 423 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 STATHP02808 62 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 FGF1P05230 155 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 CHRNB1P11230 501 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 POU2F1P14859 743 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 ITIH2P19823 946 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 TCN1P20061 433 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SLC6A4P31645 630 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 CDH5P33151 784 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SMSP52788 366 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 CDH15P55291 814 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 YBEYP58557 167 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 NAB2Q15742 525 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 MAPK14Q16539 360 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms