RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 DRC3Q9H069 523 aa18.95■□□□□ 0.62
SFXN1-209ENST00000508290 SEMA3GQ9NS98 782 aa18.95■□□□□ 0.62
SFXN1-209ENST00000508290 C14orf105Q9NVL8 296 aa18.95■□□□□ 0.62
SFXN1-209ENST00000508290 SNRNP200O75643 2136 aaKnown RBP18.94■□□□□ 0.62
SFXN1-209ENST00000508290 IGLV3-12A0A075B6K2 115 aa18.94■□□□□ 0.62
SFXN1-209ENST00000508290 VSTM2BA6NLU5 285 aa18.94■□□□□ 0.62
SFXN1-209ENST00000508290 CEACAM4O75871 244 aa18.94■□□□□ 0.62
SFXN1-209ENST00000508290 WISP3O95389 354 aaPredicted RBP18.94■□□□□ 0.62
SFXN1-209ENST00000508290 FBLP22087 321 aaKnown RBP18.94■□□□□ 0.62
SFXN1-209ENST00000508290 CRABP2P29373 138 aa18.94■□□□□ 0.62
SFXN1-209ENST00000508290 SLC26A3P40879 764 aa18.94■□□□□ 0.62
SFXN1-209ENST00000508290 SLC9A5Q14940 896 aa18.94■□□□□ 0.62
SFXN1-209ENST00000508290 TRADDQ15628 312 aa18.94■□□□□ 0.62
SFXN1-209ENST00000508290 NIPAL1Q6NVV3 410 aa18.94■□□□□ 0.62
SFXN1-209ENST00000508290 COX15Q7KZN9 410 aa18.94■□□□□ 0.62
SFXN1-209ENST00000508290 PPM1NQ8N819 430 aa18.94■□□□□ 0.62
SFXN1-209ENST00000508290 OR4K1Q8NGD4 311 aa18.94■□□□□ 0.62
SFXN1-209ENST00000508290 FBF1Q8TES7 1133 aa18.94■□□□□ 0.62
SFXN1-209ENST00000508290 CYTH2Q99418 400 aa18.94■□□□□ 0.62
SFXN1-209ENST00000508290 SPSB2Q99619 263 aa18.94■□□□□ 0.62
SFXN1-209ENST00000508290 SLC25A23Q9BV35 468 aa18.94■□□□□ 0.62
SFXN1-209ENST00000508290 MTO1Q9Y2Z2 717 aaKnown RBP18.94■□□□□ 0.62
SFXN1-209ENST00000508290 KCNE2Q9Y6J6 123 aa18.94■□□□□ 0.62
SFXN1-209ENST00000508290 ZNF462Q96JM2 2506 aa18.94■□□□□ 0.62
SFXN1-209ENST00000508290 CCDC189A1A4V9 331 aa18.93■□□□□ 0.62
SFXN1-209ENST00000508290 H0YIG0 161 aa18.93■□□□□ 0.62
SFXN1-209ENST00000508290 CDC7O00311 574 aa18.93■□□□□ 0.62
SFXN1-209ENST00000508290 SUV39H1O43463 412 aa18.93■□□□□ 0.62
SFXN1-209ENST00000508290 IPO13O94829 963 aaKnown RBP18.93■□□□□ 0.62
SFXN1-209ENST00000508290 GUCA1CO95843 209 aa18.93■□□□□ 0.62
SFXN1-209ENST00000508290 UMODP07911 640 aa18.93■□□□□ 0.62
SFXN1-209ENST00000508290 SLC35G6P0C7Q6 338 aa18.93■□□□□ 0.62
SFXN1-209ENST00000508290 SPTBP11277 2137 aa18.93■□□□□ 0.62
SFXN1-209ENST00000508290 PLA2G2AP14555 144 aa18.93■□□□□ 0.62
SFXN1-209ENST00000508290 AVPR1BP47901 424 aa18.93■□□□□ 0.62
SFXN1-209ENST00000508290 PGDP52209 483 aa18.93■□□□□ 0.62
SFXN1-209ENST00000508290 SKP1P63208 163 aa18.93■□□□□ 0.62
SFXN1-209ENST00000508290 ATP1A4Q13733 1029 aa18.93■□□□□ 0.62
SFXN1-209ENST00000508290 CSHL1Q14406 222 aa18.93■□□□□ 0.62
SFXN1-209ENST00000508290 ZNF460Q14592 562 aa18.93■□□□□ 0.62
SFXN1-209ENST00000508290 KLHDC8AQ8IYD2 350 aa18.93■□□□□ 0.62
SFXN1-209ENST00000508290 ANKRD49Q8WVL7 239 aa18.93■□□□□ 0.62
SFXN1-209ENST00000508290 SLC5A11Q8WWX8 675 aa18.93■□□□□ 0.62
SFXN1-209ENST00000508290 ALKBH8Q96BT7 664 aaKnown RBP18.93■□□□□ 0.62
SFXN1-209ENST00000508290 MIEF2Q96C03 454 aa18.93■□□□□ 0.62
SFXN1-209ENST00000508290 FMO2Q99518 471 aa18.93■□□□□ 0.62
SFXN1-209ENST00000508290 EGFL8Q99944 293 aa18.93■□□□□ 0.62
SFXN1-209ENST00000508290 CAPS2Q9BXY5 557 aa18.93■□□□□ 0.62
SFXN1-209ENST00000508290 CNOT10Q9H9A5 744 aaKnown RBP18.93■□□□□ 0.62
SFXN1-209ENST00000508290 MLXIPLQ9NP71 852 aa18.93■□□□□ 0.62
SFXN1-209ENST00000508290 MKKSQ9NPJ1 570 aaPredicted RBP18.93■□□□□ 0.62
SFXN1-209ENST00000508290 DYRK1BQ9Y463 629 aa18.93■□□□□ 0.62
SFXN1-209ENST00000508290 NPEPPSL1A6NEC2 478 aa18.92■□□□□ 0.62
SFXN1-209ENST00000508290 AGPSO00116 658 aa18.92■□□□□ 0.62
SFXN1-209ENST00000508290 SLC28A2O43868 658 aa18.92■□□□□ 0.62
SFXN1-209ENST00000508290 CNOT3O75175 753 aaKnown RBP18.92■□□□□ 0.62
SFXN1-209ENST00000508290 CYC1P08574 325 aa18.92■□□□□ 0.62
SFXN1-209ENST00000508290 CCDC166P0CW27 439 aa18.92■□□□□ 0.62
SFXN1-209ENST00000508290 CDH1P12830 882 aa18.92■□□□□ 0.62
SFXN1-209ENST00000508290 OR1D4P47884 311 aa18.92■□□□□ 0.62
SFXN1-209ENST00000508290 KLRB1Q12918 225 aa18.92■□□□□ 0.62
SFXN1-209ENST00000508290 TSNQ15631 228 aaKnown RBP18.92■□□□□ 0.62
SFXN1-209ENST00000508290 HKDC1Q2TB90 917 aa18.92■□□□□ 0.62
SFXN1-209ENST00000508290 DCAF10Q5QP82 559 aa18.92■□□□□ 0.62
SFXN1-209ENST00000508290 ASB18Q6ZVZ8 466 aa18.92■□□□□ 0.62
SFXN1-209ENST00000508290 ASPGQ86U10 573 aa18.92■□□□□ 0.62
SFXN1-209ENST00000508290 SPNS2Q8IVW8 549 aa18.92■□□□□ 0.62
SFXN1-209ENST00000508290 ARHGEF39Q8N4T4 335 aa18.92■□□□□ 0.62
SFXN1-209ENST00000508290 NOA1Q8NC60 698 aaKnown RBP18.92■□□□□ 0.62
SFXN1-209ENST00000508290 PYCR2Q96C36 320 aa18.92■□□□□ 0.62
SFXN1-209ENST00000508290 UBXN10Q96LJ8 280 aa18.92■□□□□ 0.62
SFXN1-209ENST00000508290 TRIM55Q9BYV6 548 aa18.92■□□□□ 0.62
SFXN1-209ENST00000508290 TGIF2Q9GZN2 237 aa18.92■□□□□ 0.62
SFXN1-209ENST00000508290 PELI2Q9HAT8 420 aa18.92■□□□□ 0.62
SFXN1-209ENST00000508290 P4HTMQ9NXG6 502 aa18.92■□□□□ 0.62
SFXN1-209ENST00000508290 CTSFQ9UBX1 484 aa18.92■□□□□ 0.62
SFXN1-209ENST00000508290 TP53TG5Q9Y2B4 290 aa18.92■□□□□ 0.62
SFXN1-209ENST00000508290 ZNF451Q9Y4E5 1061 aa18.92■□□□□ 0.62
SFXN1-209ENST00000508290 MAP4K5Q9Y4K4 846 aa18.92■□□□□ 0.62
SFXN1-209ENST00000508290 SEC16AO15027 2179 aa18.91■□□□□ 0.62
SFXN1-209ENST00000508290 TRBC2A0A5B9 178 aa18.91■□□□□ 0.62
SFXN1-209ENST00000508290 PIAS1O75925 651 aa18.91■□□□□ 0.62
SFXN1-209ENST00000508290 NSA2O95478 260 aaKnown RBP18.91■□□□□ 0.62
SFXN1-209ENST00000508290 ALPPP05187 535 aa18.91■□□□□ 0.62
SFXN1-209ENST00000508290 CCL11P51671 97 aa18.91■□□□□ 0.62
SFXN1-209ENST00000508290 PGGT1BP53609 377 aa18.91■□□□□ 0.62
SFXN1-209ENST00000508290 SOX8P57073 446 aa18.91■□□□□ 0.62
SFXN1-209ENST00000508290 PWP1Q13610 501 aa18.91■□□□□ 0.62
SFXN1-209ENST00000508290 TGFBIQ15582 683 aa18.91■□□□□ 0.62
SFXN1-209ENST00000508290 CPZQ66K79 652 aa18.91■□□□□ 0.62
SFXN1-209ENST00000508290 PRICKLE2Q7Z3G6 844 aa18.91■□□□□ 0.62
SFXN1-209ENST00000508290 VN1R4Q7Z5H5 301 aa18.91■□□□□ 0.62
SFXN1-209ENST00000508290 PPP1R32Q7Z5V6 425 aa18.91■□□□□ 0.62
SFXN1-209ENST00000508290 TBC1D1Q86TI0 1168 aaPredicted RBP18.91■□□□□ 0.62
SFXN1-209ENST00000508290 THOC6Q86W42 341 aaKnown RBP18.91■□□□□ 0.62
SFXN1-209ENST00000508290 CNPY4Q8N129 248 aa18.91■□□□□ 0.62
SFXN1-209ENST00000508290 MFSD9Q8NBP5 474 aa18.91■□□□□ 0.62
SFXN1-209ENST00000508290 STT3BQ8TCJ2 826 aa18.91■□□□□ 0.62
SFXN1-209ENST00000508290 TM4SF19Q96DZ7 209 aa18.91■□□□□ 0.62
SFXN1-209ENST00000508290 CRB3Q9BUF7 120 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms