RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 STARD8Q92502 1023 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 HDAC10Q969S8 669 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 ZNF501Q96CX3 271 aaPredicted RBP7.75□□□□□ -1.17
SCN1A-207ENST00000507401 ELMO2Q96JJ3 720 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 TRIM51Q9BSJ1 452 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 IL22Q9GZX6 179 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 TWSG1Q9GZX9 223 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 CHRNA10Q9GZZ6 450 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 CDC42EP4Q9H3Q1 356 aaKnown RBP7.75□□□□□ -1.17
SCN1A-207ENST00000507401 LHX9Q9NQ69 397 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 PIH1D1Q9NWS0 290 aaKnown RBP7.75□□□□□ -1.17
SCN1A-207ENST00000507401 OR6C2Q9NZP2 312 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 HAO1Q9UJM8 370 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 POMT2Q9UKY4 750 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 SNX24Q9Y343 169 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 BOD1L1Q8NFC6 3051 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 SLC5A10A0PJK1 596 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 SLC9B1P1A6NJY1 282 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 C2orf74A8MZ97 194 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 ZNF701M0R085 212 aaPredicted RBP7.74□□□□□ -1.17
SCN1A-207ENST00000507401 BTN3A3O00478 584 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 KLF11O14901 512 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 SUV39H1O43463 412 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 CREG1O75629 220 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 GOT2P00505 430 aaKnown RBP7.74□□□□□ -1.17
SCN1A-207ENST00000507401 KLK3P07288 261 aaPredicted RBP7.74□□□□□ -1.17
SCN1A-207ENST00000507401 EBLN1P0CF75 366 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 T-ENOLP0DO92 83 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 ARAFP10398 606 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 ESRRAP11474 423 aaPredicted RBP7.74□□□□□ -1.17
SCN1A-207ENST00000507401 ETS1P14921 441 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 PORP16435 677 aaPredicted RBP7.74□□□□□ -1.17
SCN1A-207ENST00000507401 POLR2CP19387 275 aaPredicted RBP7.74□□□□□ -1.17
SCN1A-207ENST00000507401 CDH3P22223 829 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 SERPINB3P29508 390 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 SHMT2P34897 504 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 GRIA1P42261 906 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 TTPAP49638 278 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 ADARP55265 1226 aaKnown RBP7.74□□□□□ -1.17
SCN1A-207ENST00000507401 SESN3P58005 492 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 ACTR3P61158 418 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 PRAMEP78395 509 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 MGAT5Q09328 741 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 CDC20Q12834 499 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 NFATC3Q12968 1075 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 CBX3Q13185 183 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 KCNAB2Q13303 367 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 KCNAB1Q14722 419 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 FASTKD1Q53R41 847 aaKnown RBP7.74□□□□□ -1.17
SCN1A-207ENST00000507401 FOXB2Q5VYV0 432 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 ZNF534Q76KX8 674 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 ADGRF3Q8IZF5 1079 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 MPP5Q8N3R9 675 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 TAB3Q8N5C8 712 aaPredicted RBP7.74□□□□□ -1.17
SCN1A-207ENST00000507401 PRELID2Q8N945 189 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 GLIS1Q8NBF1 620 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 PPHLN1Q8NEY8 458 aaKnown RBP7.74□□□□□ -1.17
SCN1A-207ENST00000507401 OR52E1Q8NGJ3 308 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 OR6P1Q8NGX9 317 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 OR5K2Q8NHB8 316 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 ASZ1Q8WWH4 475 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 EDARADDQ8WWZ3 215 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 ELMO1Q92556 727 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 PTCD3Q96EY7 689 aaKnown RBP7.74□□□□□ -1.17
SCN1A-207ENST00000507401 BIRC8Q96P09 236 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 TSSK1BQ9BXA7 367 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 MRPS26Q9BYN8 205 aaKnown RBP7.74□□□□□ -1.17
SCN1A-207ENST00000507401 TSPAN10Q9H1Z9 355 aaPredicted RBP7.74□□□□□ -1.17
SCN1A-207ENST00000507401 FANCEQ9HB96 536 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 PALMDQ9NP74 551 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 CHRAC1Q9NRG0 131 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 EURLQ9NYK6 297 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 BFARQ9NZS9 450 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 FAM8A1Q9UBU6 413 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 SERTAD3Q9UJW9 196 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 ANAPC5Q9UJX4 755 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 CROTQ9UKG9 612 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 TCAF1Q9Y4C2 921 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 PRSS21Q9Y6M0 314 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 TENM4Q6N022 2769 aa7.74□□□□□ -1.17
SCN1A-207ENST00000507401 MAGEB16A2A368 324 aa7.73□□□□□ -1.17
SCN1A-207ENST00000507401 PIPSLA2A3N6 862 aa7.73□□□□□ -1.17
SCN1A-207ENST00000507401 DYTNA2CJ06 578 aa7.73□□□□□ -1.17
SCN1A-207ENST00000507401 GSAPA4D1B5 854 aa7.73□□□□□ -1.17
SCN1A-207ENST00000507401 OR51F1A6NGY5 319 aa7.73□□□□□ -1.17
SCN1A-207ENST00000507401 BTN3A1O00481 513 aa7.73□□□□□ -1.17
SCN1A-207ENST00000507401 KPNA5O15131 536 aa7.73□□□□□ -1.17
SCN1A-207ENST00000507401 CD3EAPO15446 510 aaKnown RBP7.73□□□□□ -1.17
SCN1A-207ENST00000507401 SLC28A2O43868 658 aa7.73□□□□□ -1.17
SCN1A-207ENST00000507401 OR1I1O60431 355 aa7.73□□□□□ -1.17
SCN1A-207ENST00000507401 CPNE3O75131 537 aaKnown RBP7.73□□□□□ -1.17
SCN1A-207ENST00000507401 ENTPD5O75356 428 aa7.73□□□□□ -1.17
SCN1A-207ENST00000507401 SPAG7O75391 227 aa7.73□□□□□ -1.17
SCN1A-207ENST00000507401 GPC4O75487 556 aa7.73□□□□□ -1.17
SCN1A-207ENST00000507401 SCRG1O75711 98 aa7.73□□□□□ -1.17
SCN1A-207ENST00000507401 FAM155BO75949 473 aa7.73□□□□□ -1.17
SCN1A-207ENST00000507401 TNFAIP8O95379 198 aa7.73□□□□□ -1.17
SCN1A-207ENST00000507401 TIAF1O95411 115 aa7.73□□□□□ -1.17
SCN1A-207ENST00000507401 NTRK1P04629 796 aa7.73□□□□□ -1.17
SCN1A-207ENST00000507401 HNRNPCP07910 306 aaKnown RBP eCLIP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms