RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 IFFO1Q0D2I5 559 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 CUL3Q13618 768 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 GALNT18Q6P9A2 607 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 ZNF761Q86XN6 746 aaPredicted RBP7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 SNIP1Q8TAD8 396 aaKnown RBP7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 FAM76AQ8TAV0 307 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 CKAP2Q8WWK9 683 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 MVB12AQ96EY5 273 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 C7orf26Q96N11 449 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 NSUN5Q96P11 429 aaKnown RBP7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 MS4A8Q9BY19 250 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 CLCA2Q9UQC9 943 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 P2RX6O15547 441 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 HYAL3O43820 417 aaPredicted RBP7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 SMIM24O75264 130 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 CSO75390 466 aaKnown RBP7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 SEMA3DO95025 777 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 HIST1H2AGP0C0S8 130 aaPredicted RBP7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 MYL2P10916 166 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 GNAZP19086 355 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 HIST1H2ADP20671 130 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 ETV5P41161 510 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 HSPA7P48741 367 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 PPP2R2AP63151 447 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 NAE1Q13564 534 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 FAM53BQ14153 422 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 DOC2AQ14183 400 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 KIAA0040Q15053 153 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 CEBPEQ15744 281 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 CPZQ66K79 652 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 OR1L3Q8NH93 324 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 JPH3Q8WXH2 748 aaPredicted RBP7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 HIST1H2AHQ96KK5 128 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 SLC46A1Q96NT5 459 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 TEFMQ96QE5 360 aaKnown RBP7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 HIST1H2AJQ99878 128 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 DPH2Q9BQC3 489 aaPredicted RBP7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 H2AFJQ9BTM1 129 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 MRPS30Q9NP92 439 aaKnown RBP7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 TAC3Q9UHF0 121 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 PLCL2Q9UPR0 1127 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 CLDN16Q9Y5I7 305 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 TRIM13O60858 407 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 SIX3O95343 332 aaPredicted RBP7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 CTSBP07858 339 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 SERPINA6P08185 405 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 RAB40ALP0C0E4 278 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 CSTF3Q12996 717 aaKnown RBP7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 SPIDRQ14159 915 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 CATSPEREQ5SY80 951 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 RHBDD2Q6NTF9 364 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 CYB5D1Q6P9G0 228 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 TTLQ8NG68 377 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 TUBB1Q9H4B7 451 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 ZFP69BQ9UJL9 534 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 ADAM29Q9UKF5 820 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 GOLGA8RI6L899 631 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 TBX19O60806 448 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 KATNA1O75449 491 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 TAC1P20366 129 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 GRK2P25098 689 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 GLRBP48167 497 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 PFKFB4Q16877 469 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 FRMPD2BQ6IN97 320 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 DSELQ8IZU8 1212 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 PROKR1Q8TCW9 393 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 ZNF473Q8WTR7 871 aaKnown RBP7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 FAM111AQ96PZ2 611 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 CCT7Q99832 543 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 ZFYVE21Q9BQ24 234 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 ZNF385DQ9H6B1 395 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 OCIAD1Q9NX40 245 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 ISM1B1AKI9 464 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 FOXS1O43638 330 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 SHOX2O60902 331 aaPredicted RBP7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 SERPINE1P05121 402 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 CDH1P12830 882 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 GSTM5P46439 218 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 NOVA1P51513 510 aaKnown RBP7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 IGLV3-21P80748 117 aaPredicted RBP7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 MRPL14Q6P1L8 145 aaKnown RBP7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 TLDC1Q6P9B6 456 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 SUSD1Q6UWL2 747 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 KDF1Q8NAX2 398 aaPredicted RBP7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 OR52B6Q8NGF0 335 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 PMEPA1Q969W9 287 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 GBP5Q96PP8 586 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 TAAR9Q96RI9 348 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 NPLQ9BXD5 320 aaPredicted RBP7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 DMRT3Q9NQL9 472 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 TDRKHQ9Y2W6 561 aaKnown RBP7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 GPR179Q6PRD1 2367 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 PMS2P1A4D2B8 440 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 LRIT2A6NDA9 550 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 SLC9B1P1A6NJY1 282 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 SUPT3HB4E1H0 165 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 SUPT3HO75486 399 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 GDF5P43026 501 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 RAE1P78406 368 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms