RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 PLLPQ9Y342 182 aa11.4□□□□□ -0.58
PDLIM5-208ENST00000504489 TMEM184BQ9Y519 407 aaPredicted RBP11.4□□□□□ -0.58
PDLIM5-208ENST00000504489 ASB1Q9Y576 335 aa11.4□□□□□ -0.58
PDLIM5-208ENST00000504489 KCNE1BA0A087WTH5 132 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 A0A0J9YVX5 310 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 TRBC2A0A5B9 178 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 TMEM8BA6NDV4 472 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 A8MT66 165 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 H0YGG7 62 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 E2F3O00716 465 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 HAT1O14929 419 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 CLGNO14967 610 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 DLX3O60479 287 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 H2AFYO75367 372 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 OR2B3O76000 313 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 SIX3O95343 332 aaPredicted RBP11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 MYZAPP0CAP1 466 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 C1GALT1C1LP0DN25 315 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 IGF2RP11717 2491 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 EPB42P16452 691 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 EPORP19235 508 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 ATP5F1P24539 256 aaPredicted RBP11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 GRK3P35626 688 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 CASP2P42575 452 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 PIK3CGP48736 1102 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 ARF3P61204 181 aaPredicted RBP11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 E2F2Q14209 437 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 CATSPEREQ5SY80 951 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 NUP210LQ5VU65 1888 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 ATG9BQ674R7 924 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 FRMPD2BQ6IN97 320 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 PWWP2BQ6NUJ5 590 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 TLDC1Q6P9B6 456 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 TMPRSS11BQ86T26 416 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 EXOC3L1Q86VI1 746 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 SLC22A9Q8IVM8 553 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 GPR135Q8IZ08 494 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 SNX31Q8N9S9 440 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 MDM1Q8TC05 714 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 RDH11Q8TC12 318 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 FGF11Q92914 225 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 CCDC126Q96EE4 140 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 PHF21BQ96EK2 531 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 WDR34Q96EX3 536 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 OR2A5Q96R48 311 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 RUFY1Q96T51 708 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 SELENOSQ9BQE4 189 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 AIF1LQ9BQI0 150 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 C1QTNF3Q9BXJ4 246 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 PITHD1Q9GZP4 211 aaPredicted RBP11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 SPRTNQ9H040 489 aaPredicted RBP11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 STMN4Q9H169 189 aaPredicted RBP11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 CENPHQ9H3R5 247 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 VIPAS39Q9H9C1 493 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 SSU72Q9NP77 194 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 FOXJ2Q9P0K8 574 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 PCDHB3Q9Y5E6 796 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 ACTL7BQ9Y614 415 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 AP1M2Q9Y6Q5 423 aa11.39□□□□□ -0.59
PDLIM5-208ENST00000504489 ACACBO00763 2458 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 FREM2Q5SZK8 3169 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 LOC105369274A0A096LPK9 316 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 LOC102723532A0A0G2JNH3 316 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 FITM1A5D6W6 292 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 LRRC14BA6NHZ5 514 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 GOLGA6L10A6NI86 522 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 C1QTNF9BB2RNN3 333 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 E7EQ34 232 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 G3V2L1 256 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 TYROBPO43914 113 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 PRAMEF4O60810 478 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 KATNA1O75449 491 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 SCRG1O75711 98 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 STK17BO94768 372 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 TIAF1O95411 115 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 RPS17P08708 135 aaKnown RBP11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 HBQ1P09105 142 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 C1QTNF9P0C862 333 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 MYL2P10916 166 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 CREB1P16220 341 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 CXCR2P25025 360 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 EEF1DP29692 281 aaKnown RBP11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 PRKAA2P54646 552 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 VSX2P58304 361 aaPredicted RBP11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 HERVK_113P63132 956 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 REEP5Q00765 189 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 GTF2H2Q13888 395 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 MAP7Q14244 749 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 TBCCQ15814 346 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 PRAMEF9Q5VWM5 478 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 GTF2H2CQ6P1K8 395 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 ZYG11AQ6WRX3 759 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 TMEM126BQ8IUX1 230 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 PLD3Q8IV08 490 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 OR4N4Q8N0Y3 316 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 TBC1D19Q8N5T2 526 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 TEX9Q8N6V9 391 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 SNIP1Q8TAD8 396 aaKnown RBP11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 TM4SF19Q96DZ7 209 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms