RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 SPASTQ9UBP0 616 aa4.5□□□□□ -1.69
SCLT1-206ENST00000503565 MAD2L2Q9UI95 211 aa4.5□□□□□ -1.69
SCLT1-206ENST00000503565 NOCTQ9UK39 431 aaKnown RBP4.5□□□□□ -1.69
SCLT1-206ENST00000503565 DLGAP4Q9Y2H0 992 aa4.5□□□□□ -1.69
SCLT1-206ENST00000503565 STRAPQ9Y3F4 350 aaKnown RBP4.5□□□□□ -1.69
SCLT1-206ENST00000503565 POLR1AO95602 1720 aaPredicted RBP4.49□□□□□ -1.69
SCLT1-206ENST00000503565 FANCIQ9NVI1 1328 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 NOS1P29475 1434 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 A0A0G2JNG1 304 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 SRRM3A6NNA2 597 aaPredicted RBP4.49□□□□□ -1.69
SCLT1-206ENST00000503565 F8VVB4 439 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 F8VWA3 439 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 K7EPI3 171 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 RNASEH1O60930 286 aaKnown RBP4.49□□□□□ -1.69
SCLT1-206ENST00000503565 MOCS2O96007 188 aaPredicted RBP4.49□□□□□ -1.69
SCLT1-206ENST00000503565 SERPING1P05155 500 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 STAG3L1P0CL83 205 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 CYP2A7P20853 494 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 RPA1P27694 616 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 HOXA11P31270 313 aaPredicted RBP4.49□□□□□ -1.69
SCLT1-206ENST00000503565 MNDAP41218 407 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 ABCG1P45844 678 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 AKAP17AQ02040 695 aaKnown RBP4.49□□□□□ -1.69
SCLT1-206ENST00000503565 DSC1Q08554 894 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 HNRNPA0Q13151 305 aaKnown RBP4.49□□□□□ -1.69
SCLT1-206ENST00000503565 KIR2DS5Q14953 304 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 PTPN14Q15678 1187 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 MAPK11Q15759 364 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 EZH2Q15910 746 aaKnown RBP4.49□□□□□ -1.69
SCLT1-206ENST00000503565 SRSF7Q16629 238 aaKnown RBP eCLIP4.49□□□□□ -1.69
SCLT1-206ENST00000503565 HSP90AB3PQ58FF7 597 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 LRRC38Q5VT99 294 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 MFSD7Q6UXD7 560 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 PLEKHM3Q6ZWE6 761 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 MIER3Q7Z3K6 550 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 ASPGQ86U10 573 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 AMIGO1Q86WK6 493 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 NUDT13Q86X67 352 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 TMEM139Q8IV31 216 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 ELMOD2Q8IZ81 293 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 CLIP4Q8N3C7 705 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 PPFIBP2Q8ND30 876 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 ANKRD20A12PQ8NF67 263 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 CKAP2Q8WWK9 683 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 MRPL38Q96DV4 380 aaKnown RBP4.49□□□□□ -1.69
SCLT1-206ENST00000503565 EEF2KMTQ96G04 330 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 SGK494Q96LW2 274 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 GDAP1L1Q96MZ0 367 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 PELI2Q9HAT8 420 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 MRPL17Q9NRX2 175 aaKnown RBP4.49□□□□□ -1.69
SCLT1-206ENST00000503565 SMARCAL1Q9NZC9 954 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 ITM2BQ9Y287 266 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 TRIM17Q9Y577 477 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 SPHKAPQ2M3C7 1700 aa4.49□□□□□ -1.69
SCLT1-206ENST00000503565 SYNMO15061 1565 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 ZNF804BA4D1E1 1349 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 CCDC144AA2RUR9 1427 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 PIK3C2BO00750 1634 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 A0A087X0K7 114 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 A0A0B4J203 849 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 C2orf92A0A1B0GVN3 265 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 CTAGE9A4FU28 777 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 TLR4O00206 839 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 CPLX1O14810 134 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 SNX3O60493 162 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 SMPD2O60906 423 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 RAD51DO75771 328 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 PMS2P2O95744 297 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 FAM200BP0CF97 657 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 CTAGE8P0CG41 777 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 ETS1P14921 441 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 ZNF12P17014 697 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 DGKAP23743 735 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 ARRB2P32121 409 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 AHRP35869 848 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 GNL1P36915 607 aaPredicted RBP4.48□□□□□ -1.69
SCLT1-206ENST00000503565 ANP32AP39687 249 aaKnown RBP4.48□□□□□ -1.69
SCLT1-206ENST00000503565 PCYT1AP49585 367 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 B3GALT5-AS1P59052 145 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 GCNT1Q02742 428 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 EEF1A2Q05639 463 aaKnown RBP4.48□□□□□ -1.69
SCLT1-206ENST00000503565 MFAP5Q13361 173 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 CYP4A22Q5TCH4 519 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 PXDC1Q5TGL8 231 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 PACS1Q6VY07 963 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 SIGLEC15Q6ZMC9 328 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 PIWIL4Q7Z3Z4 852 aaKnown RBP4.48□□□□□ -1.69
SCLT1-206ENST00000503565 MRPL10Q7Z7H8 261 aaKnown RBP4.48□□□□□ -1.69
SCLT1-206ENST00000503565 CTAGE4Q8IX94 777 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 OR10Q1Q8NGQ4 319 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 EXOC6Q8TAG9 804 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 C16orf45Q96MC5 204 aaPredicted RBP4.48□□□□□ -1.69
SCLT1-206ENST00000503565 TSPAN18Q96SJ8 248 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 PKP2Q99959 881 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 CCDC3Q9BQI4 270 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 NEURL2Q9BR09 285 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 ZNF577Q9BSK1 485 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 TRAF4Q9BUZ4 470 aaPredicted RBP4.48□□□□□ -1.69
SCLT1-206ENST00000503565 CDK19Q9BWU1 502 aa4.48□□□□□ -1.69
SCLT1-206ENST00000503565 C1QTNF7Q9BXJ2 289 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms