RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 EID2Q8N6I1 236 aa13.65□□□□□ -0.22
VPS26A-209ENST00000497564 OR4K1Q8NGD4 311 aa13.65□□□□□ -0.22
VPS26A-209ENST00000497564 OR2A1Q8NGT9 310 aa13.65□□□□□ -0.22
VPS26A-209ENST00000497564 WDR20Q8TBZ3 569 aa13.65□□□□□ -0.22
VPS26A-209ENST00000497564 UBE2E3Q969T4 207 aa13.65□□□□□ -0.22
VPS26A-209ENST00000497564 SH3KBP1Q96B97 665 aa13.65□□□□□ -0.22
VPS26A-209ENST00000497564 SLC22A18Q96BI1 424 aa13.65□□□□□ -0.22
VPS26A-209ENST00000497564 REPS1Q96D71 796 aa13.65□□□□□ -0.22
VPS26A-209ENST00000497564 ERP27Q96DN0 273 aa13.65□□□□□ -0.22
VPS26A-209ENST00000497564 PPP1R36Q96LQ0 422 aa13.65□□□□□ -0.22
VPS26A-209ENST00000497564 SCNM1Q9BWG6 230 aa13.65□□□□□ -0.22
VPS26A-209ENST00000497564 SRMSQ9H3Y6 488 aa13.65□□□□□ -0.22
VPS26A-209ENST00000497564 ELOVL6Q9H5J4 265 aa13.65□□□□□ -0.22
VPS26A-209ENST00000497564 XKR8Q9H6D3 395 aa13.65□□□□□ -0.22
VPS26A-209ENST00000497564 NT5DC2Q9H857 520 aa13.65□□□□□ -0.22
VPS26A-209ENST00000497564 AKTIPQ9H8T0 292 aa13.65□□□□□ -0.22
VPS26A-209ENST00000497564 SAR1AQ9NR31 198 aa13.65□□□□□ -0.22
VPS26A-209ENST00000497564 ZNF490Q9ULM2 529 aaPredicted RBP13.65□□□□□ -0.22
VPS26A-209ENST00000497564 PPT2Q9UMR5 302 aa13.65□□□□□ -0.22
VPS26A-209ENST00000497564 DOLKQ9UPQ8 538 aa13.65□□□□□ -0.22
VPS26A-209ENST00000497564 CCL27Q9Y4X3 112 aa13.65□□□□□ -0.22
VPS26A-209ENST00000497564 PCDHGA11Q9Y5H2 935 aa13.65□□□□□ -0.22
VPS26A-209ENST00000497564 PTGDR2Q9Y5Y4 395 aa13.65□□□□□ -0.22
VPS26A-209ENST00000497564 LAMA5O15230 3695 aa13.65□□□□□ -0.23
VPS26A-209ENST00000497564 TRBV23OR9-2A0A075B6M9 112 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 PIPSLA2A3N6 862 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 B4DGG1 531 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 E9PBE3 544 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 YKT6O15498 198 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 KLHL41O60662 606 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 FKBP9O95302 570 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 PDYNP01213 254 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 CHRM5P08912 532 aaPredicted RBP13.64□□□□□ -0.23
VPS26A-209ENST00000497564 CDH1P12830 882 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 LBPP18428 481 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 HRH2P25021 359 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 CXCR2P25025 360 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 VARSP26640 1264 aaKnown RBP13.64□□□□□ -0.23
VPS26A-209ENST00000497564 MRPL19P49406 292 aaKnown RBP13.64□□□□□ -0.23
VPS26A-209ENST00000497564 ATP4BP51164 291 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 CCR8P51685 355 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 HHEXQ03014 270 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 CSTF3Q12996 717 aaKnown RBP13.64□□□□□ -0.23
VPS26A-209ENST00000497564 KIR2DS3Q14952 304 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 KRT72Q14CN4 511 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 PLCL1Q15111 1095 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 CATSPEREQ5SY80 951 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 NXNQ6DKJ4 435 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 MED27Q6P2C8 311 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 Q6ZSR9 355 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 ZNF771Q7L3S4 317 aaPredicted RBP13.64□□□□□ -0.23
VPS26A-209ENST00000497564 MARCH9Q86YJ5 346 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 SLC25A45Q8N413 288 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 C2orf73Q8N5S3 287 aaPredicted RBP13.64□□□□□ -0.23
VPS26A-209ENST00000497564 CPSF7Q8N684 471 aaKnown RBP13.64□□□□□ -0.23
VPS26A-209ENST00000497564 GPR156Q8NFN8 814 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 OR4E2Q8NGC2 313 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 OR2T11Q8NH01 316 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 SELENOMQ8WWX9 145 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 TUBGCP3Q96CW5 907 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 CCDC106Q9BWC9 280 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 BRF2Q9HAW0 419 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 GEMIN8Q9NWZ8 242 aaKnown RBP13.64□□□□□ -0.23
VPS26A-209ENST00000497564 ENTPD2Q9Y5L3 495 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 CFAP47Q6ZTR5 3102 aa13.64□□□□□ -0.23
VPS26A-209ENST00000497564 KMT2BQ9UMN6 2715 aaPredicted RBP13.63□□□□□ -0.23
VPS26A-209ENST00000497564 ATP6AP2A0A1C7CYW4 349 aa13.63□□□□□ -0.23
VPS26A-209ENST00000497564 LILRA5A6NI73 299 aa13.63□□□□□ -0.23
VPS26A-209ENST00000497564 CAPN14A8MX76 684 aa13.63□□□□□ -0.23
VPS26A-209ENST00000497564 BTN3A3O00478 584 aa13.63□□□□□ -0.23
VPS26A-209ENST00000497564 TRIM38O00635 465 aa13.63□□□□□ -0.23
VPS26A-209ENST00000497564 LSM1O15116 133 aaKnown RBP13.63□□□□□ -0.23
VPS26A-209ENST00000497564 UBDO15205 165 aa13.63□□□□□ -0.23
VPS26A-209ENST00000497564 RGS14O43566 566 aa13.63□□□□□ -0.23
VPS26A-209ENST00000497564 ATP6AP2O75787 350 aa13.63□□□□□ -0.23
VPS26A-209ENST00000497564 PSMB5P28074 263 aa13.63□□□□□ -0.23
VPS26A-209ENST00000497564 REEP5Q00765 189 aa13.63□□□□□ -0.23
VPS26A-209ENST00000497564 SLBPQ14493 270 aaKnown RBP eCLIP13.63□□□□□ -0.23
VPS26A-209ENST00000497564 HIST2H2ACQ16777 129 aaPredicted RBP13.63□□□□□ -0.23
VPS26A-209ENST00000497564 CCDC157Q569K6 752 aa13.63□□□□□ -0.23
VPS26A-209ENST00000497564 C6orf132Q5T0Z8 1188 aa13.63□□□□□ -0.23
VPS26A-209ENST00000497564 HIST2H2AA3Q6FI13 130 aa13.63□□□□□ -0.23
VPS26A-209ENST00000497564 CCDC121Q6ZUS5 278 aa13.63□□□□□ -0.23
VPS26A-209ENST00000497564 SPATA19Q7Z5L4 167 aa13.63□□□□□ -0.23
VPS26A-209ENST00000497564 SFTPA2Q8IWL1 248 aa13.63□□□□□ -0.23
VPS26A-209ENST00000497564 KRT78Q8N1N4 520 aa13.63□□□□□ -0.23
VPS26A-209ENST00000497564 ARL14Q8N4G2 192 aa13.63□□□□□ -0.23
VPS26A-209ENST00000497564 OR2L3Q8NG85 312 aa13.63□□□□□ -0.23
VPS26A-209ENST00000497564 OR7G3Q8NG95 312 aa13.63□□□□□ -0.23
VPS26A-209ENST00000497564 FLVCR1-AS1Q8TAF5 88 aa13.63□□□□□ -0.23
VPS26A-209ENST00000497564 PRR11Q96HE9 360 aaPredicted RBP13.63□□□□□ -0.23
VPS26A-209ENST00000497564 METTL2AQ96IZ6 378 aaKnown RBP13.63□□□□□ -0.23
VPS26A-209ENST00000497564 PPP3R2Q96LZ3 170 aa13.63□□□□□ -0.23
VPS26A-209ENST00000497564 CDC6Q99741 560 aa13.63□□□□□ -0.23
VPS26A-209ENST00000497564 AIF1LQ9BQI0 150 aa13.63□□□□□ -0.23
VPS26A-209ENST00000497564 ACAT2Q9BWD1 397 aa13.63□□□□□ -0.23
VPS26A-209ENST00000497564 FARSBQ9NSD9 589 aaKnown RBP13.63□□□□□ -0.23
VPS26A-209ENST00000497564 SPHK1Q9NYA1 384 aa13.63□□□□□ -0.23
VPS26A-209ENST00000497564 ADGRE2Q9UHX3 823 aa13.63□□□□□ -0.23
VPS26A-209ENST00000497564 CACNA1BQ00975 2339 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms