RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 KLHL5Q96PQ7 755 aa3.63□□□□□ -1.83
SMC4-225ENST00000497203 ATG101Q9BSB4 218 aa3.63□□□□□ -1.83
SMC4-225ENST00000497203 RIMS4Q9H426 269 aaPredicted RBP3.63□□□□□ -1.83
SMC4-225ENST00000497203 ZNF624Q9P2J8 865 aaPredicted RBP3.63□□□□□ -1.83
SMC4-225ENST00000497203 GMEB2Q9UKD1 530 aa3.63□□□□□ -1.83
SMC4-225ENST00000497203 R4GN57 208 aa3.63□□□□□ -1.83
SMC4-225ENST00000497203 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 A0A0B4J203 849 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 ZNF197O14709 1029 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 CTDSPLO15194 276 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 PCDH7O60245 1069 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 CDK2AP2O75956 126 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 CLPTM1O96005 669 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 DARSP14868 501 aaKnown RBP3.62□□□□□ -1.83
SMC4-225ENST00000497203 NKX2-1P43699 371 aaPredicted RBP3.62□□□□□ -1.83
SMC4-225ENST00000497203 CETN1Q12798 172 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 XKR6Q5GH73 641 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 UGT3A1Q6NUS8 523 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 MARK2Q7KZI7 788 aaKnown RBP3.62□□□□□ -1.83
SMC4-225ENST00000497203 ANKRD33Q7Z3H0 272 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 PIGZQ86VD9 579 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 CCDC60Q8IWA6 550 aaPredicted RBP3.62□□□□□ -1.83
SMC4-225ENST00000497203 RCOR2Q8IZ40 523 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 APCDD1Q8J025 514 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 AMER3Q8N944 861 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 SPC24Q8NBT2 197 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 OR10V1Q8NGI7 309 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 LRRC8CQ8TDW0 803 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 SUSD6Q92537 303 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 GIMAP5Q96F15 307 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 C4orf45Q96LM5 186 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 TSSK2Q96PF2 358 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 BTBD9Q96Q07 612 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 CDCA3Q99618 268 aaPredicted RBP3.62□□□□□ -1.83
SMC4-225ENST00000497203 NACAP1Q9BZK3 213 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 SLC5A7Q9GZV3 580 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 UBQLN3Q9H347 655 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 C10orf88Q9H8K7 445 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 SIX2Q9NPC8 291 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 IARS2Q9NSE4 1012 aaKnown RBP3.62□□□□□ -1.83
SMC4-225ENST00000497203 OR6C2Q9NZP2 312 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 CNIH4Q9P003 139 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 TRPC4Q9UBN4 977 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 SLC12A6Q9UHW9 1150 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 GPR132Q9UNW8 380 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 KCNJ14Q9UNX9 436 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 TCF19Q9Y242 345 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 C2CD2Q9Y426 696 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 SNX5Q9Y5X3 404 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 ACEP12821 1306 aa3.62□□□□□ -1.83
SMC4-225ENST00000497203 TRAV18A0A075B6X5 111 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 TRIM64A6NGJ6 449 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 TRIM64BA6NI03 449 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 PRSS46E5RG02 174 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 BLOC1S5-TXNDC5H3BN57 136 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 LINC01565O15544 149 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 SCO2O43819 266 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 RTN2O75298 545 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 EML2O95834 649 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 UROSP10746 265 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 CYP2A7P20853 494 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 CASP3P42574 277 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 MAGEA11P43364 429 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 OR3A3P47888 321 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 GCNT1Q02742 428 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 UBXN1Q04323 297 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 ARHGAP1Q07960 439 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 SQLEQ14534 574 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 P2RY6Q15077 328 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 XKR3Q5GH77 459 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 LRRC38Q5VT99 294 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 GFI1BQ5VTD9 330 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 ARHGEF16Q5VV41 709 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 PRSS55Q6UWB4 352 aaPredicted RBP3.61□□□□□ -1.83
SMC4-225ENST00000497203 NHLRC1Q6VVB1 395 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 SH2D5Q6ZV89 423 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 KCTD9Q7L273 389 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 SLC16A9Q7RTY1 509 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 PRUNE1Q86TP1 453 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 DCUN1D3Q8IWE4 304 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 KIRREL3Q8IZU9 778 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 KBTBD8Q8NFY9 601 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 OR7A2PQ8NGA2 310 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 HPSE2Q8WWQ2 592 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 PIK3R3Q92569 461 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 NR4A3Q92570 626 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 DYRK2Q92630 601 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 CDKN2AIPNLQ96HQ2 116 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 NDNQ99608 321 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 C17orf62Q9BQA9 187 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 CCDC3Q9BQI4 270 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 RNPEPL1Q9HAU8 725 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 INTS9Q9NV88 658 aaKnown RBP3.61□□□□□ -1.83
SMC4-225ENST00000497203 MDFICQ9P1T7 246 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 IL36AQ9UHA7 158 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 AGTPBP1Q9UPW5 1226 aa3.61□□□□□ -1.83
SMC4-225ENST00000497203 TRBV5-5A0A0J9YX44 114 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 A0A1W2PRV1 198 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 FAM149AA5PLN7 773 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 EXTL3O43909 919 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms