RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 SLC2A2P11168 524 aaPredicted RBP4.2□□□□□ -1.74
VPS36-206ENST00000497149 CD59P13987 128 aa4.2□□□□□ -1.74
VPS36-206ENST00000497149 DUTP33316 252 aaKnown RBP4.2□□□□□ -1.74
VPS36-206ENST00000497149 TCF7P36402 384 aaPredicted RBP4.2□□□□□ -1.74
VPS36-206ENST00000497149 TNNT3P45378 269 aaPredicted RBP4.2□□□□□ -1.74
VPS36-206ENST00000497149 LEPRP48357 1165 aaKnown RBP4.2□□□□□ -1.74
VPS36-206ENST00000497149 LBX1P52954 281 aa4.2□□□□□ -1.74
VPS36-206ENST00000497149 KRT83P78385 493 aa4.2□□□□□ -1.74
VPS36-206ENST00000497149 IRX6P78412 446 aaPredicted RBP4.2□□□□□ -1.74
VPS36-206ENST00000497149 HNRNPDQ14103 355 aaKnown RBP4.2□□□□□ -1.74
VPS36-206ENST00000497149 ZNF74Q16587 644 aa4.2□□□□□ -1.74
VPS36-206ENST00000497149 CCDC184Q52MB2 194 aa4.2□□□□□ -1.74
VPS36-206ENST00000497149 ADAMTSL4-AS1Q5T5F5 129 aa4.2□□□□□ -1.74
VPS36-206ENST00000497149 GFI1BQ5VTD9 330 aa4.2□□□□□ -1.74
VPS36-206ENST00000497149 FUT10Q6P4F1 479 aa4.2□□□□□ -1.74
VPS36-206ENST00000497149 BHLHB9Q6PI77 547 aa4.2□□□□□ -1.74
VPS36-206ENST00000497149 PTAR1Q7Z6K3 402 aaPredicted RBP4.2□□□□□ -1.74
VPS36-206ENST00000497149 LRTM2Q8N967 370 aa4.2□□□□□ -1.74
VPS36-206ENST00000497149 ATAD1Q8NBU5 361 aa4.2□□□□□ -1.74
VPS36-206ENST00000497149 NR4A3Q92570 626 aa4.2□□□□□ -1.74
VPS36-206ENST00000497149 ATP6V1E2Q96A05 226 aa4.2□□□□□ -1.74
VPS36-206ENST00000497149 AZIN2Q96A70 460 aa4.2□□□□□ -1.74
VPS36-206ENST00000497149 CENPTQ96BT3 561 aa4.2□□□□□ -1.74
VPS36-206ENST00000497149 MAGED4Q96JG8 741 aa4.2□□□□□ -1.74
VPS36-206ENST00000497149 NECTIN4Q96NY8 510 aa4.2□□□□□ -1.74
VPS36-206ENST00000497149 BTBD9Q96Q07 612 aa4.2□□□□□ -1.74
VPS36-206ENST00000497149 NKX3-1Q99801 234 aaPredicted RBP4.2□□□□□ -1.74
VPS36-206ENST00000497149 BARHL1Q9BZE3 327 aa4.2□□□□□ -1.74
VPS36-206ENST00000497149 COPS7BQ9H9Q2 264 aaPredicted RBP4.2□□□□□ -1.74
VPS36-206ENST00000497149 RAVER2Q9HCJ3 691 aaKnown RBP4.2□□□□□ -1.74
VPS36-206ENST00000497149 ATAD3AQ9NVI7 634 aa4.2□□□□□ -1.74
VPS36-206ENST00000497149 ARMCX3Q9UH62 379 aaPredicted RBP4.2□□□□□ -1.74
VPS36-206ENST00000497149 PRDM4Q9UKN5 801 aa4.2□□□□□ -1.74
VPS36-206ENST00000497149 NOL7Q9UMY1 257 aaKnown RBP4.2□□□□□ -1.74
VPS36-206ENST00000497149 WDR37Q9Y2I8 494 aa4.2□□□□□ -1.74
VPS36-206ENST00000497149 MRPS28Q9Y2Q9 187 aaKnown RBP4.2□□□□□ -1.74
VPS36-206ENST00000497149 FAM170AA1A519 330 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 OOEPA6NGQ2 149 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 YDJCA8MPS7 323 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 PRSS46E5RG02 174 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 PI4K2BG5E9Z4 385 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 TEX28O15482 410 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 ST8SIA3O43173 380 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 STX6O43752 255 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 TGDSO95455 350 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 MOCS2O96007 188 aaPredicted RBP4.19□□□□□ -1.74
VPS36-206ENST00000497149 SUPT20HL2P0C7V6 817 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 MUTP22033 750 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 KCNJ1P48048 391 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 SNRPD1P62314 119 aaKnown RBP4.19□□□□□ -1.74
VPS36-206ENST00000497149 IL10RBQ08334 325 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 TRIM29Q14134 588 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 PTPN14Q15678 1187 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 MEP1BQ16820 701 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 PWWP2BQ6NUJ5 590 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 TTC27Q6P3X3 843 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 LEKR1Q6ZMV7 388 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 CPEB2Q7Z5Q1 589 aaKnown RBP4.19□□□□□ -1.74
VPS36-206ENST00000497149 HOGA1Q86XE5 327 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 CCDC60Q8IWA6 550 aaPredicted RBP4.19□□□□□ -1.74
VPS36-206ENST00000497149 FAM89BQ8N5H3 189 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 UXS1Q8NBZ7 420 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 CTCFLQ8NI51 663 aaPredicted RBP4.19□□□□□ -1.74
VPS36-206ENST00000497149 GDAP1Q8TB36 358 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 SGF29Q96ES7 293 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 DESI2Q9BSY9 194 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 WDR13Q9H1Z4 485 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 RNF121Q9H920 327 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 FGF22Q9HCT0 170 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 VPS18Q9P253 973 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 TMEM181Q9P2C4 612 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 RUVBL2Q9Y230 463 aaKnown RBP4.19□□□□□ -1.74
VPS36-206ENST00000497149 KLK4Q9Y5K2 254 aa4.19□□□□□ -1.74
VPS36-206ENST00000497149 TRAV18A0A075B6X5 111 aa4.18□□□□□ -1.74
VPS36-206ENST00000497149 A0A087WUV0 522 aaPredicted RBP4.18□□□□□ -1.74
VPS36-206ENST00000497149 H0YAE9 185 aa4.18□□□□□ -1.74
VPS36-206ENST00000497149 ZNF195O14628 629 aa4.18□□□□□ -1.74
VPS36-206ENST00000497149 KRT86O43790 486 aa4.18□□□□□ -1.74
VPS36-206ENST00000497149 SSTR1P30872 391 aa4.18□□□□□ -1.74
VPS36-206ENST00000497149 YWHAHQ04917 246 aaPredicted RBP4.18□□□□□ -1.74
VPS36-206ENST00000497149 SGCGQ13326 291 aa4.18□□□□□ -1.74
VPS36-206ENST00000497149 KRT81Q14533 505 aa4.18□□□□□ -1.74
VPS36-206ENST00000497149 TMEM187Q14656 261 aa4.18□□□□□ -1.74
VPS36-206ENST00000497149 E2F5Q15329 346 aa4.18□□□□□ -1.74
VPS36-206ENST00000497149 ANKRD20A4Q4UJ75 823 aa4.18□□□□□ -1.74
VPS36-206ENST00000497149 ANKRD20A8PQ5CZ79 823 aa4.18□□□□□ -1.74
VPS36-206ENST00000497149 ANKRD20A2Q5SQ80 823 aa4.18□□□□□ -1.74
VPS36-206ENST00000497149 C1QTNF12Q5T7M4 302 aa4.18□□□□□ -1.74
VPS36-206ENST00000497149 ANKRD20A1Q5TYW2 823 aa4.18□□□□□ -1.74
VPS36-206ENST00000497149 ANKRD20A3Q5VUR7 823 aa4.18□□□□□ -1.74
VPS36-206ENST00000497149 CASC4Q6P4E1 433 aa4.18□□□□□ -1.74
VPS36-206ENST00000497149 Q6ZSR9 355 aa4.18□□□□□ -1.74
VPS36-206ENST00000497149 FCRLAQ7L513 359 aa4.18□□□□□ -1.74
VPS36-206ENST00000497149 OTOAQ7RTW8 1153 aa4.18□□□□□ -1.74
VPS36-206ENST00000497149 GPR141Q7Z602 305 aa4.18□□□□□ -1.74
VPS36-206ENST00000497149 PIGWQ7Z7B1 504 aa4.18□□□□□ -1.74
VPS36-206ENST00000497149 GPC2Q8N158 579 aa4.18□□□□□ -1.74
VPS36-206ENST00000497149 RAB42Q8N4Z0 105 aa4.18□□□□□ -1.74
VPS36-206ENST00000497149 GBP7Q8N8V2 638 aaPredicted RBP4.18□□□□□ -1.74
VPS36-206ENST00000497149 GRK7Q8WTQ7 553 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms