RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 C17orf64Q86WR6 236 aa11.26□□□□□ -0.61
THBS3-208ENST00000496332 ARHGEF39Q8N4T4 335 aa11.26□□□□□ -0.61
THBS3-208ENST00000496332 RBMXL3Q8N7X1 1067 aaKnown RBP11.26□□□□□ -0.61
THBS3-208ENST00000496332 PYROXD1Q8WU10 500 aa11.26□□□□□ -0.61
THBS3-208ENST00000496332 MIB2Q96AX9 1013 aa11.26□□□□□ -0.61
THBS3-208ENST00000496332 MVB12AQ96EY5 273 aa11.26□□□□□ -0.61
THBS3-208ENST00000496332 MMABQ96EY8 250 aaPredicted RBP11.26□□□□□ -0.61
THBS3-208ENST00000496332 PDLIM5Q96HC4 596 aaKnown RBP11.26□□□□□ -0.61
THBS3-208ENST00000496332 SGPP1Q9BX95 441 aa11.26□□□□□ -0.61
THBS3-208ENST00000496332 TRIM54Q9BYV2 358 aa11.26□□□□□ -0.61
THBS3-208ENST00000496332 SAYSD1Q9NPB0 183 aa11.26□□□□□ -0.61
THBS3-208ENST00000496332 C5AR2Q9P296 337 aa11.26□□□□□ -0.61
THBS3-208ENST00000496332 TRPC4Q9UBN4 977 aa11.26□□□□□ -0.61
THBS3-208ENST00000496332 IKZF3Q9UKT9 509 aa11.26□□□□□ -0.61
THBS3-208ENST00000496332 MED13Q9UHV7 2174 aa11.26□□□□□ -0.61
THBS3-208ENST00000496332 SETXQ7Z333 2677 aaKnown RBP11.25□□□□□ -0.61
THBS3-208ENST00000496332 TNRC6AQ8NDV7 1962 aaKnown RBP11.25□□□□□ -0.61
THBS3-208ENST00000496332 IGLV3-12A0A075B6K2 115 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 KCNE1BA0A087WTH5 132 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 FAM95CA0A1B0GW59 222 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 FOXS1O43638 330 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 KLHL41O60662 606 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 PIAS1O75925 651 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 ALPPP05187 535 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 ANXA5P08758 320 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 ENO2P09104 434 aaPredicted RBP11.25□□□□□ -0.61
THBS3-208ENST00000496332 CDH1P12830 882 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 ITGA3P26006 1051 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 SSTR1P30872 391 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 SLC26A3P40879 764 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 AP1S2P56377 157 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 TAS2R39P59534 338 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 RPS15AP62244 130 aaKnown RBP11.25□□□□□ -0.61
THBS3-208ENST00000496332 NDUFA9Q16795 377 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 TUBB8Q3ZCM7 444 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 DUPD1Q68J44 220 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 CAPN13Q6MZZ7 669 aaPredicted RBP11.25□□□□□ -0.61
THBS3-208ENST00000496332 LCTLQ6UWM7 567 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 VN1R4Q7Z5H5 301 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 LAPTM4BQ86VI4 370 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 NKAPQ8N5F7 415 aaKnown RBP11.25□□□□□ -0.61
THBS3-208ENST00000496332 AMER3Q8N944 861 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 OR11G2Q8NGC1 345 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 PYCR2Q96C36 320 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 THAP11Q96EK4 314 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 VPS50Q96JG6 964 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 MACROD1Q9BQ69 325 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 MESP1Q9BRJ9 268 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 HAUS8Q9BT25 410 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 DRC3Q9H069 523 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 ZNF552Q9H707 407 aaPredicted RBP11.25□□□□□ -0.61
THBS3-208ENST00000496332 SMYD2Q9NRG4 433 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 NSMCE4AQ9NXX6 385 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 GRHL1Q9NZI5 618 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 LUZP4Q9P127 313 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 C3orf18Q9UK00 162 aa11.25□□□□□ -0.61
THBS3-208ENST00000496332 MRPS2Q9Y399 296 aaKnown RBP11.25□□□□□ -0.61
THBS3-208ENST00000496332 FLNBO75369 2602 aaKnown RBP11.25□□□□□ -0.61
THBS3-208ENST00000496332 FLNCQ14315 2725 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 FEZF1A0PJY2 475 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 CDC7O00311 574 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 EIF3HO15372 352 aaKnown RBP eCLIP11.24□□□□□ -0.61
THBS3-208ENST00000496332 LCMT2O60294 686 aaKnown RBP11.24□□□□□ -0.61
THBS3-208ENST00000496332 IPO13O94829 963 aaKnown RBP11.24□□□□□ -0.61
THBS3-208ENST00000496332 SORBS2O94875 1100 aaKnown RBP11.24□□□□□ -0.61
THBS3-208ENST00000496332 GUCA1CO95843 209 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 ZNF37AP17032 561 aaPredicted RBP11.24□□□□□ -0.61
THBS3-208ENST00000496332 GRK3P35626 688 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 BCL6P41182 706 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 AVPR1BP47901 424 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 CD97P48960 835 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 EMP2P54851 167 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 SNRPNP63162 240 aaKnown RBP11.24□□□□□ -0.61
THBS3-208ENST00000496332 FAM53BQ14153 422 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 ZNF460Q14592 562 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 SYT16Q17RD7 645 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 SLC6A19Q695T7 634 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 SBSNQ6UWP8 590 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 ATCAYQ86WG3 371 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 PARP9Q8IXQ6 854 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 EFCAB3Q8N7B9 438 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 Q8NA96 180 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 OR9A4Q8NGU2 314 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 OR56A3Q8NH54 315 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 CPT1CQ8TCG5 803 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 ATL1Q8WXF7 558 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 PNPLA2Q96AD5 504 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 C8orf44Q96CB5 159 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 FBXL8Q96CD0 374 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 OR4K3Q96R72 315 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 MCMBPQ9BTE3 642 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 TGIF2Q9GZN2 237 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 RHOJQ9H4E5 214 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 ZBTB20Q9HC78 741 aaPredicted RBP11.24□□□□□ -0.61
THBS3-208ENST00000496332 MKKSQ9NPJ1 570 aaPredicted RBP11.24□□□□□ -0.61
THBS3-208ENST00000496332 SLAMF7Q9NQ25 335 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 C14orf105Q9NVL8 296 aa11.24□□□□□ -0.61
THBS3-208ENST00000496332 NOVA2Q9UNW9 492 aaKnown RBP11.24□□□□□ -0.61
THBS3-208ENST00000496332 UTP11Q9Y3A2 253 aaKnown RBP11.24□□□□□ -0.61
THBS3-208ENST00000496332 CCDC88CQ9P219 2028 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms