RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 VWFP04275 2813 aa13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 A0A0A6YYC8 382 aaPredicted RBP13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 PINLYPA6NC86 204 aa13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 TMEM191CA6NGB0 347 aa13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 ARHGEF33A8MVX0 844 aa13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 I3L1I5 382 aaPredicted RBP13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 AP2A1O95782 977 aa13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 S1PR4O95977 384 aa13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 PRKCSHP14314 528 aaPredicted RBP13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 ATP1B2P14415 290 aaPredicted RBP13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 TPH1P17752 444 aa13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 ACADLP28330 430 aa13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 THBS2P35442 1172 aa13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 MLF1P58340 268 aa13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 KRT81Q14533 505 aa13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 PAFAH1B3Q15102 231 aaKnown RBP13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 POMZP3Q6PJE2 187 aa13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 C12orf54Q6X4T0 127 aa13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 RNF44Q7L0R7 432 aa13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 TRILQ7L0X0 811 aa13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 CYP4Z2PQ8N1L4 340 aa13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 TNIP2Q8NFZ5 429 aa13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 TADA1Q96BN2 335 aa13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 LCORQ96JN0 433 aaPredicted RBP13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 DEPPQ9NTK1 212 aa13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 SPTLC3Q9NUV7 552 aa13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 C6orf203Q9P0P8 240 aaPredicted RBP13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 CRLS1Q9UJA2 301 aa13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 SCN3AQ9NY46 2000 aa13.55□□□□□ -0.24
CHMP2B-205ENST00000494980 EEF1E1-BLOC1S5C9J1V9 151 aa13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 CFAP99D6REC4 459 aa13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 AQP7O14520 342 aa13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 EEF1E1O43324 174 aaKnown RBP13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 KDM1AO60341 852 aa13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 IGHG3P01860 377 aa13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 CD48P09326 243 aa13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 GABRA1P14867 456 aa13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 PCK1P35558 622 aa13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 AGTR2P50052 363 aa13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 ATP5J2P56134 94 aa13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 WNT3P56703 355 aa13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 IFI35P80217 286 aaPredicted RBP13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 TRIM14Q14142 442 aa13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 USP10Q14694 798 aaKnown RBP13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 HKDC1Q2TB90 917 aa13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 BOLA3Q53S33 107 aa13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 SFT2D3Q587I9 215 aa13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 MAATS1Q7Z4T9 603 aa13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 ZUFSPQ96AP4 578 aa13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 IL17FQ96PD4 163 aa13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 LPAR4Q99677 370 aa13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 SLC25A51Q9H1U9 297 aa13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 GANQ9H2C0 597 aa13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 UBP1Q9NZI7 540 aa13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 ZNF629Q9UEG4 869 aaPredicted RBP13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 RWDD2AQ9UIY3 292 aa13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 RUVBL1Q9Y265 456 aaKnown RBP13.54□□□□□ -0.24
CHMP2B-205ENST00000494980 A0A1B0GVC2 190 aa13.53□□□□□ -0.24
CHMP2B-205ENST00000494980 SOWAHDA6NJG2 315 aa13.53□□□□□ -0.24
CHMP2B-205ENST00000494980 TARM1B6A8C7 271 aa13.53□□□□□ -0.24
CHMP2B-205ENST00000494980 PES1O00541 588 aaKnown RBP13.53□□□□□ -0.24
CHMP2B-205ENST00000494980 CASKO14936 926 aa13.53□□□□□ -0.24
CHMP2B-205ENST00000494980 SIAH2O43255 324 aa13.53□□□□□ -0.24
CHMP2B-205ENST00000494980 FOXS1O43638 330 aa13.53□□□□□ -0.24
CHMP2B-205ENST00000494980 SRP72O76094 671 aaKnown RBP13.53□□□□□ -0.24
CHMP2B-205ENST00000494980 CYC1P08574 325 aa13.53□□□□□ -0.24
CHMP2B-205ENST00000494980 CD9P21926 228 aa13.53□□□□□ -0.24
CHMP2B-205ENST00000494980 EMP3P54852 163 aa13.53□□□□□ -0.24
CHMP2B-205ENST00000494980 JAM2P57087 298 aa13.53□□□□□ -0.24
CHMP2B-205ENST00000494980 SLC26A5P58743 744 aa13.53□□□□□ -0.24
CHMP2B-205ENST00000494980 DEFA6Q01524 100 aa13.53□□□□□ -0.24
CHMP2B-205ENST00000494980 GBE1Q04446 702 aa13.53□□□□□ -0.24
CHMP2B-205ENST00000494980 BRD3Q15059 726 aa13.53□□□□□ -0.24
CHMP2B-205ENST00000494980 CLEC12BQ2HXU8 276 aa13.53□□□□□ -0.24
CHMP2B-205ENST00000494980 SIRPB2Q5JXA9 342 aa13.53□□□□□ -0.24
CHMP2B-205ENST00000494980 CCDC183Q5T5S1 534 aa13.53□□□□□ -0.24
CHMP2B-205ENST00000494980 SLC22A16Q86VW1 577 aa13.53□□□□□ -0.24
CHMP2B-205ENST00000494980 SLC25A41Q8N5S1 370 aa13.53□□□□□ -0.24
CHMP2B-205ENST00000494980 ELP5Q8TE02 316 aa13.53□□□□□ -0.24
CHMP2B-205ENST00000494980 SARAFQ96BY9 339 aa13.53□□□□□ -0.24
CHMP2B-205ENST00000494980 CAPZA3Q96KX2 299 aa13.53□□□□□ -0.24
CHMP2B-205ENST00000494980 COPS8Q99627 209 aa13.53□□□□□ -0.24
CHMP2B-205ENST00000494980 TTTY12Q9BZ98 90 aa13.53□□□□□ -0.24
CHMP2B-205ENST00000494980 DRC3Q9H069 523 aa13.53□□□□□ -0.24
CHMP2B-205ENST00000494980 A0A0G2JMM0 328 aa13.52□□□□□ -0.25
CHMP2B-205ENST00000494980 A0A1W2PPB8 328 aa13.52□□□□□ -0.25
CHMP2B-205ENST00000494980 A0A1W2PRS3 328 aa13.52□□□□□ -0.25
CHMP2B-205ENST00000494980 KIR3DP1A8MWS1 328 aa13.52□□□□□ -0.25
CHMP2B-205ENST00000494980 H0YGG7 62 aa13.52□□□□□ -0.25
CHMP2B-205ENST00000494980 FCHO1O14526 889 aa13.52□□□□□ -0.25
CHMP2B-205ENST00000494980 STX7O15400 261 aaKnown RBP13.52□□□□□ -0.25
CHMP2B-205ENST00000494980 TUBB4AP04350 444 aa13.52□□□□□ -0.25
CHMP2B-205ENST00000494980 PAX1P15863 534 aa13.52□□□□□ -0.25
CHMP2B-205ENST00000494980 PSMB5P28074 263 aa13.52□□□□□ -0.25
CHMP2B-205ENST00000494980 MAN2A2P49641 1150 aa13.52□□□□□ -0.25
CHMP2B-205ENST00000494980 ARF3P61204 181 aaPredicted RBP13.52□□□□□ -0.25
CHMP2B-205ENST00000494980 ACTN3Q08043 901 aaPredicted RBP13.52□□□□□ -0.25
CHMP2B-205ENST00000494980 SLC14A2Q15849 920 aa13.52□□□□□ -0.25
CHMP2B-205ENST00000494980 C6orf52Q5T4I8 152 aa13.52□□□□□ -0.25
CHMP2B-205ENST00000494980 CSNK1A1LQ8N752 337 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms