RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 FEZF1A0PJY2 475 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 KLHL41O60662 606 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 SEMA7AO75326 666 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 IPO13O94829 963 aaKnown RBP9.12□□□□□ -0.95
MSH5-218ENST00000494646 AGFG2O95081 481 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 TTC4O95801 387 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 HEXBP07686 556 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 ANXA5P08758 320 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 TCP1P17987 556 aaKnown RBP9.12□□□□□ -0.95
MSH5-218ENST00000494646 SAT1P21673 171 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 IVDP26440 423 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 SLC26A3P40879 764 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 RGS4P49798 205 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 ABATP80404 500 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 MRPS25P82663 173 aaKnown RBP9.12□□□□□ -0.95
MSH5-218ENST00000494646 MAT1AQ00266 395 aaKnown RBP9.12□□□□□ -0.95
MSH5-218ENST00000494646 EEF1A2Q05639 463 aaKnown RBP9.12□□□□□ -0.95
MSH5-218ENST00000494646 NAE1Q13564 534 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 NR6A1Q15406 480 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 TEDDM1Q5T9Z0 273 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 AGAP7PQ5VUJ5 663 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 IRAK1BP1Q5VVH5 260 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 ATG9BQ674R7 924 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 HIST2H2BCQ6DN03 193 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 AGTRAPQ6RW13 159 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 IGFL3Q6UXB1 125 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 Q6ZS92 163 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 CREG2Q8IUH2 290 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 IQCKQ8N0W5 287 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 MYO1HQ8N1T3 1032 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 CATSPER1Q8NEC5 780 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 OR9A4Q8NGU2 314 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 TM9SF4Q92544 642 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 LINGO1Q96FE5 620 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 CERS2Q96G23 380 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 CNDP1Q96KN2 507 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 CCDC138Q96M89 665 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 AGAP4Q96P64 663 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 TRIM51Q9BSJ1 452 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 LHPPQ9H008 270 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 PARVBQ9HBI1 364 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 PLAC1Q9HBJ0 212 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 CCDC177Q9NQR7 707 aaPredicted RBP9.12□□□□□ -0.95
MSH5-218ENST00000494646 NPDC1Q9NQX5 325 aaPredicted RBP9.12□□□□□ -0.95
MSH5-218ENST00000494646 TMEM184CQ9NVA4 438 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 SH2B3Q9UQQ2 575 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 NTNG1Q9Y2I2 539 aa9.12□□□□□ -0.95
MSH5-218ENST00000494646 MAST4O15021 2626 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 NSG1A0A0A6YYJ2 146 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 OR2W5A6NFC9 320 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 IDSB3KWA1 339 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 MAP2K7O14733 419 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 TTI1O43156 1089 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 JRKO75564 520 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 CBX6O95503 412 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 C8GP07360 202 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 CELA2AP08217 269 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 HIST1H2AGP0C0S8 130 aaPredicted RBP9.11□□□□□ -0.95
MSH5-218ENST00000494646 EZRP15311 586 aaKnown RBP9.11□□□□□ -0.95
MSH5-218ENST00000494646 HIST1H2ADP20671 130 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 CXCR2P25025 360 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 AVPR1BP47901 424 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 ITGA8P53708 1063 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 TBPL1P62380 186 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 CSNK1G2P78368 415 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 DR1Q01658 176 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 MEF2AQ02078 507 aaPredicted RBP9.11□□□□□ -0.95
MSH5-218ENST00000494646 PHKG1Q16816 387 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 ZXDCQ2QGD7 858 aaPredicted RBP9.11□□□□□ -0.95
MSH5-218ENST00000494646 MFSD4BQ5TF39 518 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 HECTD2Q5U5R9 776 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 TRMT10BQ6PF06 316 aaKnown RBP9.11□□□□□ -0.95
MSH5-218ENST00000494646 NDUFAF7Q7L592 441 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 PRSS41Q7RTY9 318 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 PDIK1LQ8N165 341 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 AMER3Q8N944 861 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 GPATCH11Q8N954 259 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 GABPB2Q8TAK5 448 aaPredicted RBP9.11□□□□□ -0.95
MSH5-218ENST00000494646 PYCR2Q96C36 320 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 VPS50Q96JG6 964 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 HIST1H2AHQ96KK5 128 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 PSMG3-AS1Q96PY0 264 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 PHF12Q96QT6 1004 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 HIST1H2AJQ99878 128 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 NAT9Q9BTE0 207 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 H2AFJQ9BTM1 129 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 SLC29A3Q9BZD2 475 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 DRC3Q9H069 523 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 PLA2G3Q9NZ20 509 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 PTGFRNQ9P2B2 879 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 PYCARDQ9ULZ3 195 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 VWA7Q9Y334 891 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 SNX24Q9Y343 169 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 SAR1BQ9Y6B6 198 aa9.11□□□□□ -0.95
MSH5-218ENST00000494646 SPTBN1Q01082 2364 aaKnown RBP9.1□□□□□ -0.95
MSH5-218ENST00000494646 CACNA1DQ01668 2161 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 SPTAN1Q13813 2472 aaKnown RBP9.1□□□□□ -0.95
MSH5-218ENST00000494646 IGLV3-12A0A075B6K2 115 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 IGHV3-20A0A0C4DH32 117 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 SGK494L7N484 410 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms