RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 MMABQ96EY8 250 aaPredicted RBP31.6■■■□□ 2.65
CBX4-203ENST00000494546 PDLIM5Q96HC4 596 aaKnown RBP31.6■■■□□ 2.65
CBX4-203ENST00000494546 SMAD5Q99717 465 aaKnown RBP31.6■■■□□ 2.65
CBX4-203ENST00000494546 DRC3Q9H069 523 aa31.6■■■□□ 2.65
CBX4-203ENST00000494546 RAB17Q9H0T7 212 aa31.6■■■□□ 2.65
CBX4-203ENST00000494546 RHOJQ9H4E5 214 aa31.6■■■□□ 2.65
CBX4-203ENST00000494546 TRPC4Q9UBN4 977 aa31.6■■■□□ 2.65
CBX4-203ENST00000494546 ANKRD12Q6UB98 2062 aa31.6■■■□□ 2.65
CBX4-203ENST00000494546 FFAR3O14843 346 aa31.59■■■□□ 2.65
CBX4-203ENST00000494546 GPR42O15529 346 aa31.59■■■□□ 2.65
CBX4-203ENST00000494546 PRPF4O43172 522 aaKnown RBP eCLIP31.59■■■□□ 2.651e-6■■■■■ 31.8
CBX4-203ENST00000494546 DPM1O60762 260 aa31.59■■■□□ 2.65
CBX4-203ENST00000494546 ALOX12BO75342 701 aa31.59■■■□□ 2.65
CBX4-203ENST00000494546 ANXA5P08758 320 aa31.59■■■□□ 2.65
CBX4-203ENST00000494546 ENO2P09104 434 aaPredicted RBP31.59■■■□□ 2.65
CBX4-203ENST00000494546 CDH1P12830 882 aa31.59■■■□□ 2.65
CBX4-203ENST00000494546 PLTPP55058 493 aa31.59■■■□□ 2.65
CBX4-203ENST00000494546 TAS2R39P59534 338 aa31.59■■■□□ 2.65
CBX4-203ENST00000494546 FOXK1P85037 733 aa31.59■■■□□ 2.65
CBX4-203ENST00000494546 DSG2Q14126 1118 aa31.59■■■□□ 2.65
CBX4-203ENST00000494546 VWA2Q5GFL6 755 aa31.59■■■□□ 2.65
CBX4-203ENST00000494546 VWA5B1Q5TIE3 1220 aa31.59■■■□□ 2.65
CBX4-203ENST00000494546 TENM4Q6N022 2769 aa31.59■■■□□ 2.65
CBX4-203ENST00000494546 A0A0A6YYC8 382 aaPredicted RBP31.58■■■□□ 2.65
CBX4-203ENST00000494546 FEZF1A0PJY2 475 aa31.58■■■□□ 2.65
CBX4-203ENST00000494546 I3L1I5 382 aaPredicted RBP31.58■■■□□ 2.65
CBX4-203ENST00000494546 NPPBP16860 134 aa31.58■■■□□ 2.65
CBX4-203ENST00000494546 MYBPC3Q14896 1274 aa31.58■■■□□ 2.65
CBX4-203ENST00000494546 NDUFA9Q16795 377 aa31.58■■■□□ 2.65
CBX4-203ENST00000494546 ZXDCQ2QGD7 858 aaPredicted RBP31.58■■■□□ 2.65
CBX4-203ENST00000494546 KIRREL2Q6UWL6 708 aa31.58■■■□□ 2.65
CBX4-203ENST00000494546 SBSNQ6UWP8 590 aa31.58■■■□□ 2.65
CBX4-203ENST00000494546 VN1R4Q7Z5H5 301 aa31.58■■■□□ 2.65
CBX4-203ENST00000494546 ARHGEF39Q8N4T4 335 aa31.58■■■□□ 2.65
CBX4-203ENST00000494546 NKAPQ8N5F7 415 aaKnown RBP31.58■■■□□ 2.65
CBX4-203ENST00000494546 ATL1Q8WXF7 558 aa31.58■■■□□ 2.65
CBX4-203ENST00000494546 CDKL2Q92772 493 aa31.58■■■□□ 2.65
CBX4-203ENST00000494546 FBXL8Q96CD0 374 aa31.58■■■□□ 2.65
CBX4-203ENST00000494546 VPS39Q96JC1 886 aa31.58■■■□□ 2.65
CBX4-203ENST00000494546 HAUS8Q9BT25 410 aa31.58■■■□□ 2.65
CBX4-203ENST00000494546 MFRPQ9BY79 579 aa31.58■■■□□ 2.65
CBX4-203ENST00000494546 C3orf18Q9UK00 162 aa31.58■■■□□ 2.65
CBX4-203ENST00000494546 MDC1Q14676 2089 aaKnown RBP31.58■■■□□ 2.65
CBX4-203ENST00000494546 NPEPPSL1A6NEC2 478 aa31.57■■■□□ 2.64
CBX4-203ENST00000494546 TTLL8A6PVC2 850 aa31.57■■■□□ 2.64
CBX4-203ENST00000494546 FOXS1O43638 330 aa31.57■■■□□ 2.64
CBX4-203ENST00000494546 AIMP2Q13155 320 aaKnown RBP31.57■■■□□ 2.64
CBX4-203ENST00000494546 OR56A3Q8NH54 315 aa31.57■■■□□ 2.64
CBX4-203ENST00000494546 MACROD1Q9BQ69 325 aa31.57■■■□□ 2.64
CBX4-203ENST00000494546 TXNDC16Q9P2K2 825 aa31.57■■■□□ 2.64
CBX4-203ENST00000494546 PLAAQ9Y263 795 aa31.57■■■□□ 2.64
CBX4-203ENST00000494546 MRPS2Q9Y399 296 aaKnown RBP31.57■■■□□ 2.64
CBX4-203ENST00000494546 IGLV3-12A0A075B6K2 115 aa31.56■■■□□ 2.64
CBX4-203ENST00000494546 KCNE1BA0A087WTH5 132 aa31.56■■■□□ 2.64
CBX4-203ENST00000494546 CXorf49A8MYA2 514 aaPredicted RBP31.56■■■□□ 2.64
CBX4-203ENST00000494546 CDC7O00311 574 aa31.56■■■□□ 2.64
CBX4-203ENST00000494546 ITGA3P26006 1051 aa31.56■■■□□ 2.64
CBX4-203ENST00000494546 SLC26A3P40879 764 aa31.56■■■□□ 2.64
CBX4-203ENST00000494546 TUBB8Q3ZCM7 444 aa31.56■■■□□ 2.64
CBX4-203ENST00000494546 ZNF572Q7Z3I7 529 aaPredicted RBP31.56■■■□□ 2.64
CBX4-203ENST00000494546 CCDC25Q86WR0 208 aa31.56■■■□□ 2.64
CBX4-203ENST00000494546 HPS6Q86YV9 775 aa31.56■■■□□ 2.64
CBX4-203ENST00000494546 CEP97Q8IW35 865 aa31.56■■■□□ 2.64
CBX4-203ENST00000494546 AMER3Q8N944 861 aa31.56■■■□□ 2.64
CBX4-203ENST00000494546 THAP11Q96EK4 314 aa31.56■■■□□ 2.64
CBX4-203ENST00000494546 C16orf45Q96MC5 204 aaPredicted RBP31.56■■■□□ 2.64
CBX4-203ENST00000494546 GPAMQ9HCL2 828 aa31.56■■■□□ 2.64
CBX4-203ENST00000494546 NOVA2Q9UNW9 492 aaKnown RBP31.56■■■□□ 2.64
CBX4-203ENST00000494546 TCRBV9S1A1TA0A576 114 aa31.55■■■□□ 2.64
CBX4-203ENST00000494546 ALPPP05187 535 aa31.55■■■□□ 2.64
CBX4-203ENST00000494546 GRK3P35626 688 aa31.55■■■□□ 2.64
CBX4-203ENST00000494546 BCL6P41182 706 aa31.55■■■□□ 2.64
CBX4-203ENST00000494546 SLC12A2P55011 1212 aa31.55■■■□□ 2.64
CBX4-203ENST00000494546 CAV1Q03135 178 aa31.55■■■□□ 2.64
CBX4-203ENST00000494546 CKAP4Q07065 602 aaKnown RBP31.55■■■□□ 2.64
CBX4-203ENST00000494546 FAM53BQ14153 422 aa31.55■■■□□ 2.64
CBX4-203ENST00000494546 TRADDQ15628 312 aa31.55■■■□□ 2.64
CBX4-203ENST00000494546 C3orf62Q6ZUJ4 267 aa31.55■■■□□ 2.64
CBX4-203ENST00000494546 LAPTM4BQ86VI4 370 aa31.55■■■□□ 2.64
CBX4-203ENST00000494546 VPS50Q96JG6 964 aa31.55■■■□□ 2.64
CBX4-203ENST00000494546 MCMBPQ9BTE3 642 aa31.55■■■□□ 2.64
CBX4-203ENST00000494546 ZNF552Q9H707 407 aaPredicted RBP31.55■■■□□ 2.64
CBX4-203ENST00000494546 LUZP4Q9P127 313 aa31.55■■■□□ 2.64
CBX4-203ENST00000494546 C5AR2Q9P296 337 aa31.55■■■□□ 2.64
CBX4-203ENST00000494546 MTO1Q9Y2Z2 717 aaKnown RBP31.55■■■□□ 2.64
CBX4-203ENST00000494546 KLHL41O60662 606 aa31.54■■■□□ 2.64
CBX4-203ENST00000494546 AVPR1BP47901 424 aa31.54■■■□□ 2.64
CBX4-203ENST00000494546 SOX8P57073 446 aa31.54■■■□□ 2.64
CBX4-203ENST00000494546 SNRPNP63162 240 aaKnown RBP31.54■■■□□ 2.64
CBX4-203ENST00000494546 PPP1R3AQ16821 1122 aa31.54■■■□□ 2.64
CBX4-203ENST00000494546 SYT16Q17RD7 645 aa31.54■■■□□ 2.64
CBX4-203ENST00000494546 JMJD6Q6NYC1 403 aaPredicted RBP31.54■■■□□ 2.64
CBX4-203ENST00000494546 RBMXL3Q8N7X1 1067 aaKnown RBP31.54■■■□□ 2.64
CBX4-203ENST00000494546 OR11G2Q8NGC1 345 aa31.54■■■□□ 2.64
CBX4-203ENST00000494546 FBXO25Q8TCJ0 367 aa31.54■■■□□ 2.64
CBX4-203ENST00000494546 ANKRD49Q8WVL7 239 aa31.54■■■□□ 2.64
CBX4-203ENST00000494546 OR4K3Q96R72 315 aa31.54■■■□□ 2.64
CBX4-203ENST00000494546 MESP1Q9BRJ9 268 aa31.54■■■□□ 2.64
CBX4-203ENST00000494546 MKKSQ9NPJ1 570 aaPredicted RBP31.54■■■□□ 2.64
CBX4-203ENST00000494546 MAP4K5Q9Y4K4 846 aa31.54■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms