RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 GALNT18Q6P9A2 607 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 ARMCX6Q7L4S7 300 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 ANKRD46Q86W74 232 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 SIRT5Q9NXA8 310 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 GPSM3Q9Y4H4 160 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 A0A096LPI6 279 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 KCNJ13O60928 360 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 ERN1O75460 977 aaKnown RBP15.91■□□□□ 0.14
ATG4B-225ENST00000494465 OXTRP30559 389 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 CDKN2CP42773 168 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 KIAA1024LP59773 190 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 CYP4F3Q08477 520 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 HIST2H2ACQ16777 129 aaPredicted RBP15.91■□□□□ 0.14
ATG4B-225ENST00000494465 GRAMD1BQ3KR37 738 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 TPRG1LQ5T0D9 272 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 HIST2H2AA3Q6FI13 130 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 OR4F3Q6IEY1 312 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 HMBOX1Q6NT76 420 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 MSANTD1Q6ZTZ1 278 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 ADGRG5Q8IZF4 528 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 DENND6BQ8NEG7 585 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 GPR156Q8NFN8 814 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 DNAJB8Q8NHS0 232 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 ITCHQ96J02 903 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 BMFQ96LC9 184 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 FERD3LQ96RJ6 166 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 PHF7Q9BWX1 381 aaPredicted RBP15.91■□□□□ 0.14
ATG4B-225ENST00000494465 RPF2Q9H7B2 306 aaKnown RBP15.91■□□□□ 0.14
ATG4B-225ENST00000494465 UBE2ZQ9H832 354 aaPredicted RBP15.91■□□□□ 0.14
ATG4B-225ENST00000494465 EBF1Q9UH73 591 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 MOSPD1Q9UJG1 213 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 DHRS12A0PJE2 317 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 PRSS38A1L453 326 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 SCAMP1O15126 338 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 PSMB5P28074 263 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 TIA1P31483 386 aaKnown RBP eCLIP15.9■□□□□ 0.14
ATG4B-225ENST00000494465 PIK3CBP42338 1070 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 KIR3DL1P43629 444 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 DPY19L1Q2PZI1 675 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 GPR180Q86V85 440 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 DTWD1Q8N5C7 304 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 ADCY4Q8NFM4 1077 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 SMPDL3AQ92484 453 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 CPPED1Q9BRF8 314 aaPredicted RBP15.9■□□□□ 0.14
ATG4B-225ENST00000494465 REXO4Q9GZR2 422 aaKnown RBP15.9■□□□□ 0.14
ATG4B-225ENST00000494465 CUEDC1Q9NWM3 386 aaPredicted RBP15.9■□□□□ 0.14
ATG4B-225ENST00000494465 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.9■□□□□ 0.14
ATG4B-225ENST00000494465 ERVK-11Q9UQG0 969 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 BTBD3Q9Y2F9 522 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 DTNAQ9Y4J8 743 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 YY2O15391 372 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 MYO1DO94832 1006 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 KLHL18O94889 574 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 TGFB1P01137 390 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 ANXA4P09525 319 aaPredicted RBP15.9■□□□□ 0.14
ATG4B-225ENST00000494465 HNRNPFP52597 415 aaKnown RBP15.9■□□□□ 0.14
ATG4B-225ENST00000494465 CTBSQ01459 385 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 SRSF11Q05519 484 aaKnown RBP15.9■□□□□ 0.14
ATG4B-225ENST00000494465 TMIGD1Q6UXZ0 262 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 C17orf64Q86WR6 236 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 ABHD11Q8NFV4 315 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 OR8J2Q8NGG1 315 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 PDXPQ96GD0 296 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 CAMK1GQ96NX5 476 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 OR51B5Q9H339 312 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 RMND5AQ9H871 391 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 WASH6PQ9NQA3 447 aa15.9■□□□□ 0.14
ATG4B-225ENST00000494465 IMP3Q9NV31 184 aaKnown RBP15.9■□□□□ 0.14
ATG4B-225ENST00000494465 EXO1Q9UQ84 846 aaKnown RBP15.9■□□□□ 0.14
ATG4B-225ENST00000494465 OR52A4PA6NMU1 304 aa15.89■□□□□ 0.13
ATG4B-225ENST00000494465 TIPRLO75663 272 aa15.89■□□□□ 0.13
ATG4B-225ENST00000494465 TBX6O95947 436 aaPredicted RBP15.89■□□□□ 0.13
ATG4B-225ENST00000494465 UAP1L1Q3KQV9 507 aa15.89■□□□□ 0.13
ATG4B-225ENST00000494465 ANO7Q6IWH7 933 aa15.89■□□□□ 0.13
ATG4B-225ENST00000494465 Q6ZS52 159 aa15.89■□□□□ 0.13
ATG4B-225ENST00000494465 PROSER1Q86XN7 944 aa15.89■□□□□ 0.13
ATG4B-225ENST00000494465 C10orf111Q8N326 155 aa15.89■□□□□ 0.13
ATG4B-225ENST00000494465 ZNF548Q8NEK5 533 aaPredicted RBP15.89■□□□□ 0.13
ATG4B-225ENST00000494465 OR10A6Q8NH74 314 aa15.89■□□□□ 0.13
ATG4B-225ENST00000494465 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.89■□□□□ 0.13
ATG4B-225ENST00000494465 OR1E3Q8WZA6 343 aa15.89■□□□□ 0.13
ATG4B-225ENST00000494465 MIEF2Q96C03 454 aa15.89■□□□□ 0.13
ATG4B-225ENST00000494465 AURKBQ96GD4 344 aaPredicted RBP15.89■□□□□ 0.13
ATG4B-225ENST00000494465 KAT8Q9H7Z6 458 aaKnown RBP15.89■□□□□ 0.13
ATG4B-225ENST00000494465 CARS2Q9HA77 564 aaKnown RBP15.89■□□□□ 0.13
ATG4B-225ENST00000494465 PRDM8Q9NQV8 689 aa15.89■□□□□ 0.13
ATG4B-225ENST00000494465 PNMA8BQ9ULN7 279 aaPredicted RBP15.89■□□□□ 0.13
ATG4B-225ENST00000494465 PLXND1Q9Y4D7 1925 aa15.89■□□□□ 0.13
ATG4B-225ENST00000494465 LRP4O75096 1905 aa15.89■□□□□ 0.13
ATG4B-225ENST00000494465 DNAH14Q0VDD8 3507 aa15.89■□□□□ 0.13
ATG4B-225ENST00000494465 SCAMP2O15127 329 aaKnown RBP15.89■□□□□ 0.13
ATG4B-225ENST00000494465 PCDH7O60245 1069 aa15.89■□□□□ 0.13
ATG4B-225ENST00000494465 GSNP06396 782 aa15.89■□□□□ 0.13
ATG4B-225ENST00000494465 IDSP22304 550 aa15.89■□□□□ 0.13
ATG4B-225ENST00000494465 SFSWAPQ12872 951 aaKnown RBP15.89■□□□□ 0.13
ATG4B-225ENST00000494465 NFATC4Q14934 902 aa15.89■□□□□ 0.13
ATG4B-225ENST00000494465 AASDHQ4L235 1098 aaPredicted RBP15.89■□□□□ 0.13
ATG4B-225ENST00000494465 COMMD6Q7Z4G1 85 aa15.89■□□□□ 0.13
ATG4B-225ENST00000494465 UBE2E3Q969T4 207 aa15.89■□□□□ 0.13
ATG4B-225ENST00000494465 MSANTD3Q96H12 275 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms