RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 EXO1Q9UQ84 846 aaKnown RBP2.14□□□□□ -2.07
PTPN12-212ENST00000494248 GAB2Q9UQC2 676 aa2.14□□□□□ -2.07
PTPN12-212ENST00000494248 R3HDM2Q9Y2K5 976 aaKnown RBP2.14□□□□□ -2.07
PTPN12-212ENST00000494248 CBY1Q9Y3M2 126 aa2.14□□□□□ -2.07
PTPN12-212ENST00000494248 PCDHA10Q9Y5I2 948 aa2.14□□□□□ -2.07
PTPN12-212ENST00000494248 LOC105369274A0A096LPK9 316 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 LOC102723532A0A0G2JNH3 316 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 A0A1B0GVM2 712 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 A0A1W2PNU3 283 aaPredicted RBP2.13□□□□□ -2.07
PTPN12-212ENST00000494248 ERICH2A1L162 156 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 CXorf65A6NEN9 183 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 C5orf52A6NGY3 159 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 I6L893 689 aaPredicted RBP2.13□□□□□ -2.07
PTPN12-212ENST00000494248 TRDMT1O14717 391 aaKnown RBP2.13□□□□□ -2.07
PTPN12-212ENST00000494248 HS3ST1O14792 307 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 SMAD9O15198 467 aaKnown RBP2.13□□□□□ -2.07
PTPN12-212ENST00000494248 ALOX15BO15296 676 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 TTI1O43156 1089 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 HCRTR2O43614 444 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 B4GALT2O60909 372 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 WBP4O75554 376 aaKnown RBP2.13□□□□□ -2.07
PTPN12-212ENST00000494248 CRCPO75575 148 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 TOM1L1O75674 476 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 NEURL1O76050 574 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 PDE9AO76083 593 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 KLHL2O95198 593 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 CELF2O95319 508 aaKnown RBP2.13□□□□□ -2.07
PTPN12-212ENST00000494248 TRUB2O95900 331 aaKnown RBP2.13□□□□□ -2.07
PTPN12-212ENST00000494248 LGI1O95970 557 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 IGHEP01854 428 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 PGK2P07205 417 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 CRYGCP07315 174 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 ASNSP08243 561 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 UQCRFS1P1P0C7P4 283 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 CALCBP10092 127 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 ODC1P11926 461 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 POU2F1P14859 743 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 FOSL2P15408 326 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 TCF4P15884 667 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 NAGAP17050 411 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 CHRNB2P17787 502 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 DDX5P17844 614 aaKnown RBP2.13□□□□□ -2.07
PTPN12-212ENST00000494248 GM2AP17900 193 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 FUT1P19526 365 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 KLRC2P26717 231 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 CDC25CP30307 473 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 HOXA6P31267 233 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 TNFSF8P32971 234 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 GLIPR1P48060 266 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 RFX5P48382 616 aaPredicted RBP2.13□□□□□ -2.07
PTPN12-212ENST00000494248 PCP4P48539 62 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 SLC11A1P49279 550 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 ARHGDIBP52566 201 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 SMSP52788 366 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 MTTPP55157 894 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 SHC2P98077 582 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 DR1Q01658 176 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 LIPEQ05469 1076 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 CXCL9Q07325 125 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 DRP2Q13474 957 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 GNA13Q14344 377 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 PDK3Q15120 406 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 SNAPC1Q16533 368 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 CDO1Q16878 200 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 MTHFSDQ2M296 383 aaKnown RBP2.13□□□□□ -2.07
PTPN12-212ENST00000494248 KLHL40Q2TBA0 621 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 CBWD6Q4V339 395 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 BCL7AQ4VC05 210 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 IFI44LQ53G44 452 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 RUNDC3AQ59EK9 446 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 TMEM41BQ5BJD5 291 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 CBWD3Q5JTY5 395 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 DCST1Q5T197 706 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 PMS2CLQ68D20 193 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 KRT39Q6A163 491 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 ATL3Q6DD88 541 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 SULT1C3Q6IMI6 304 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 ADAM5Q6NVV9 412 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 PMF1Q6P1K2 205 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 MSANTD2Q6P1R3 559 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 CASC4Q6P4E1 433 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 C16orf89Q6UX73 402 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 WDR88Q6ZMY6 472 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 EFL1Q7Z2Z2 1120 aaKnown RBP2.13□□□□□ -2.07
PTPN12-212ENST00000494248 PRSS42Q7Z5A4 293 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 PHLDB2Q86SQ0 1253 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 ADAMTSL2Q86TH1 951 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 RTN4RL2Q86UN3 420 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 WDR5BQ86VZ2 330 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 TPRA1Q86W33 373 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 KLBQ86Z14 1044 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 ZDHHC21Q8IVQ6 265 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 OR4N4Q8N0Y3 316 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 RNF10Q8N5U6 811 aaKnown RBP2.13□□□□□ -2.07
PTPN12-212ENST00000494248 PLD5Q8N7P1 536 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 UXS1Q8NBZ7 420 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 C11orf65Q8NCR3 313 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 CMASQ8NFW8 434 aaPredicted RBP2.13□□□□□ -2.07
PTPN12-212ENST00000494248 OR10S1Q8NGN2 331 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 OR6S1Q8NH40 331 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms