RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 MOGSQ13724 837 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 OTUB2Q96DC9 234 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 ZNF641Q96N77 438 aaPredicted RBP18.62■□□□□ 0.57
COL27A1-207ENST00000494090 ITPAQ9BY32 194 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 XYLT2Q9H1B5 865 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 MKS1Q9NXB0 559 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 RBMX2Q9Y388 322 aaKnown RBP18.62■□□□□ 0.57
COL27A1-207ENST00000494090 SPIN1Q9Y657 262 aaPredicted RBP18.62■□□□□ 0.57
COL27A1-207ENST00000494090 TLR4O00206 839 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 FPR1P21462 350 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 CBFBQ13951 182 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 PDSS1Q5T2R2 415 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 C15orf40Q8WUR7 153 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 TSGA13Q96PP4 275 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 NDC1Q9BTX1 674 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 ADAM7Q9H2U9 754 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 RETREG1Q9H6L5 497 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 ERI3O43414 337 aaKnown RBP18.62■□□□□ 0.57
COL27A1-207ENST00000494090 EPOP01588 193 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 ZNF3P17036 446 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 GKN2Q86XP6 184 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 PLD6Q8N2A8 252 aaKnown RBP18.62■□□□□ 0.57
COL27A1-207ENST00000494090 KLHL36Q8N4N3 616 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 RC3H2Q9HBD1 1191 aaKnown RBP18.62■□□□□ 0.57
COL27A1-207ENST00000494090 CRTAC1Q9NQ79 661 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 LRRC37A3O60309 1634 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 ACOX3O15254 700 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 ITGA10O75578 1167 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 CREG1O75629 220 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 DBIP07108 87 aaKnown RBP18.62■□□□□ 0.57
COL27A1-207ENST00000494090 HAPLN1P10915 354 aaPredicted RBP18.62■□□□□ 0.57
COL27A1-207ENST00000494090 VLDLRP98155 873 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 SGCBQ16585 318 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 PGBD2Q6P3X8 592 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 AMBNQ9NP70 447 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 TLR9Q9NR96 1032 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 FAM120CQ9NX05 1096 aaKnown RBP18.62■□□□□ 0.57
COL27A1-207ENST00000494090 CSTF2P33240 577 aaKnown RBP eCLIP18.61■□□□□ 0.57
COL27A1-207ENST00000494090 CLCNKAP51800 687 aa18.61■□□□□ 0.57
COL27A1-207ENST00000494090 MADCAM1Q13477 382 aa18.61■□□□□ 0.57
COL27A1-207ENST00000494090 ENPP2Q13822 863 aa18.61■□□□□ 0.57
COL27A1-207ENST00000494090 MPP2Q14168 576 aa18.61■□□□□ 0.57
COL27A1-207ENST00000494090 THOC6Q86W42 341 aaKnown RBP18.61■□□□□ 0.57
COL27A1-207ENST00000494090 TSPEARQ8WU66 669 aa18.61■□□□□ 0.57
COL27A1-207ENST00000494090 B4DGG1 531 aa18.61■□□□□ 0.57
COL27A1-207ENST00000494090 ZNF20P17024 532 aa18.61■□□□□ 0.57
COL27A1-207ENST00000494090 DHPSP49366 369 aaPredicted RBP18.61■□□□□ 0.57
COL27A1-207ENST00000494090 PUM1Q14671 1186 aaKnown RBP eCLIP18.61■□□□□ 0.57
COL27A1-207ENST00000494090 PLA2G15Q8NCC3 412 aa18.61■□□□□ 0.57
COL27A1-207ENST00000494090 IRF7Q92985 503 aa18.61■□□□□ 0.57
COL27A1-207ENST00000494090 COL21A1Q96P44 957 aa18.61■□□□□ 0.57
COL27A1-207ENST00000494090 B3GAT2Q9NPZ5 323 aa18.61■□□□□ 0.57
COL27A1-207ENST00000494090 MEMO1Q9Y316 297 aa18.61■□□□□ 0.57
COL27A1-207ENST00000494090 PMF1-BGLAPU3KQ54 211 aa18.61■□□□□ 0.57
COL27A1-207ENST00000494090 A0A1W2PQ45 241 aaPredicted RBP18.61■□□□□ 0.57
COL27A1-207ENST00000494090 A0A1W2PQY0 241 aa18.61■□□□□ 0.57
COL27A1-207ENST00000494090 POP7O75817 140 aaKnown RBP18.61■□□□□ 0.57
COL27A1-207ENST00000494090 RCBTB2O95199 551 aa18.61■□□□□ 0.57
COL27A1-207ENST00000494090 CLDN7O95471 211 aa18.61■□□□□ 0.57
COL27A1-207ENST00000494090 SNTA1Q13424 505 aa18.61■□□□□ 0.57
COL27A1-207ENST00000494090 C10orf62Q5T681 223 aaPredicted RBP18.61■□□□□ 0.57
COL27A1-207ENST00000494090 MAPKAP1Q9BPZ7 522 aa18.61■□□□□ 0.57
COL27A1-207ENST00000494090 Q9N2J8 555 aa18.61■□□□□ 0.57
COL27A1-207ENST00000494090 PNO1Q9NRX1 252 aaKnown RBP18.61■□□□□ 0.57
COL27A1-207ENST00000494090 TPTEP56180 551 aa18.61■□□□□ 0.57
COL27A1-207ENST00000494090 BNIP3Q12983 259 aa18.61■□□□□ 0.57
COL27A1-207ENST00000494090 IDNKQ5T6J7 187 aa18.61■□□□□ 0.57
COL27A1-207ENST00000494090 OR56A1Q8NGH5 318 aa18.61■□□□□ 0.57
COL27A1-207ENST00000494090 C1orf74Q96LT6 269 aa18.61■□□□□ 0.57
COL27A1-207ENST00000494090 C19orf25Q9UFG5 118 aaPredicted RBP18.61■□□□□ 0.57
COL27A1-207ENST00000494090 FANCGO15287 622 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 PLGP00747 810 aaPredicted RBP18.6■□□□□ 0.57
COL27A1-207ENST00000494090 CHRNA1P02708 482 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 SEMA3AQ14563 771 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 TXNDC8Q6A555 127 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 AMIGO1Q86WK6 493 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 PNLDC1Q8NA58 520 aaKnown RBP18.6■□□□□ 0.57
COL27A1-207ENST00000494090 ZNF461Q8TAF7 563 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 FAM110BQ8TC76 370 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 CITED4Q96RK1 184 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 DCSTAMPQ9H295 470 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 COMMD3Q9UBI1 195 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 NFKBIEO00221 500 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 KCNC3Q14003 757 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 SYT16Q17RD7 645 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 SLC9B2Q86UD5 537 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 KCTD7Q96MP8 289 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 TMEM74Q96NL1 305 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 EHD1Q9H4M9 534 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 TXNRD2Q9NNW7 524 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 FBXL12Q9NXK8 326 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 TMEM9Q9P0T7 183 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 TELO2Q9Y4R8 837 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 PCDHB11Q9Y5F2 797 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 NALCNQ8IZF0 1738 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 ADH1BP00325 375 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 F2P00734 622 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 H1F0P07305 194 aaKnown RBP18.6■□□□□ 0.57
COL27A1-207ENST00000494090 OC90Q02509 493 aaPredicted RBP18.6■□□□□ 0.57
COL27A1-207ENST00000494090 RABL3Q5HYI8 236 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms