RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 C5AR2Q9P296 337 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 MAP10Q9P2G4 905 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 ANKMY1Q9P2S6 941 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 TRPC4Q9UBN4 977 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 C3orf18Q9UK00 162 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 G3BP2Q9UN86 482 aaKnown RBP8.12□□□□□ -1.11
LRCH3-219ENST00000494069 COMMD10Q9Y6G5 202 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 TEX264Q9Y6I9 313 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 PRRC2CQ9Y520 2896 aaKnown RBP8.11□□□□□ -1.11
LRCH3-219ENST00000494069 MDC1Q14676 2089 aaKnown RBP8.11□□□□□ -1.11
LRCH3-219ENST00000494069 IGLV3-12A0A075B6K2 115 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 FEZF1A0PJY2 475 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 OR2W5A6NFC9 320 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 ZNF839A8K0R7 811 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 LCMT2O60294 686 aaKnown RBP8.11□□□□□ -1.11
LRCH3-219ENST00000494069 SEMA7AO75326 666 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 VPS4BO75351 444 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 SEC31AO94979 1220 aaKnown RBP8.11□□□□□ -1.11
LRCH3-219ENST00000494069 CCNDBP1O95273 360 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 TTC4O95801 387 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 CELA2AP08217 269 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 EZRP15311 586 aaKnown RBP8.11□□□□□ -1.11
LRCH3-219ENST00000494069 SLC26A3P40879 764 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 CSNK1G2P78368 415 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 ABATP80404 500 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 OCA2Q04671 838 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 NAE1Q13564 534 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 MORF4L2Q15014 288 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 EIF2S3LQ2VIR3 472 aaKnown RBP8.11□□□□□ -1.11
LRCH3-219ENST00000494069 CRB2Q5IJ48 1285 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 HECTD2Q5U5R9 776 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 ATG9BQ674R7 924 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 AGTRAPQ6RW13 159 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 VN1R4Q7Z5H5 301 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 CUZD1Q86UP6 607 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 FAM26EQ8N5C1 309 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 GPATCH11Q8N954 259 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 GALNT11Q8NCW6 608 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 OR9A4Q8NGU2 314 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 MCOLN3Q8TDD5 553 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 PYCR2Q96C36 320 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 KRT12Q99456 494 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 NAPGQ99747 312 aaPredicted RBP8.11□□□□□ -1.11
LRCH3-219ENST00000494069 PRR14Q9BWN1 585 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 PARVBQ9HBI1 364 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 ZNF160Q9HCG1 818 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 CCDC177Q9NQR7 707 aaPredicted RBP8.11□□□□□ -1.11
LRCH3-219ENST00000494069 SEMA3GQ9NS98 782 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 ASF1BQ9NVP2 202 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 ZNF282Q9UDV7 671 aaPredicted RBP8.11□□□□□ -1.11
LRCH3-219ENST00000494069 NXT1Q9UKK6 140 aaKnown RBP8.11□□□□□ -1.11
LRCH3-219ENST00000494069 VPS4AQ9UN37 437 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 B3GNT3Q9Y2A9 372 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 NTNG1Q9Y2I2 539 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 SNX24Q9Y343 169 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 PSAT1Q9Y617 370 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 SAR1BQ9Y6B6 198 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 PTPN13Q12923 2485 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 DOCK10Q96BY6 2186 aa8.11□□□□□ -1.11
LRCH3-219ENST00000494069 USP9XQ93008 2570 aaPredicted RBP8.1□□□□□ -1.11
LRCH3-219ENST00000494069 BLACEA4D250 179 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 CTAGE15A4D2H0 777 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 IDSB3KWA1 339 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 EIF3FO00303 357 aaPredicted RBP8.1□□□□□ -1.11
LRCH3-219ENST00000494069 DNAJB6O75190 326 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 KLHL18O94889 574 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 IGHEP01854 428 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 ALPPP05187 535 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 C8GP07360 202 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 CDH1P12830 882 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 NPPBP16860 134 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 SAT1P21673 171 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 FDXRP22570 491 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 BCL6P41182 706 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 RPL21P46778 160 aaKnown RBP8.1□□□□□ -1.11
LRCH3-219ENST00000494069 GLRBP48167 497 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 RGS4P49798 205 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 EMP2P54851 167 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 MEF2AQ02078 507 aaPredicted RBP8.1□□□□□ -1.11
LRCH3-219ENST00000494069 EEF1A2Q05639 463 aaKnown RBP8.1□□□□□ -1.11
LRCH3-219ENST00000494069 ZNF460Q14592 562 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 NAA25Q14CX7 972 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 TUBB8Q3ZCM7 444 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 STEAP4Q687X5 459 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 HIST2H2BCQ6DN03 193 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 UGT3A1Q6NUS8 523 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 IGFL3Q6UXB1 125 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 LINC00696Q6ZRV3 163 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 Q6ZS92 163 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 KIAA0408Q6ZU52 694 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 SYDE1Q6ZW31 735 aaPredicted RBP8.1□□□□□ -1.11
LRCH3-219ENST00000494069 CTAGE6Q86UF2 777 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 HPS6Q86YV9 775 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 ZC3H7AQ8IWR0 971 aaKnown RBP8.1□□□□□ -1.11
LRCH3-219ENST00000494069 PDIK1LQ8N165 341 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 MYO1HQ8N1T3 1032 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 ZADH2Q8N4Q0 377 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 KCT2Q8NC54 265 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 CATSPER1Q8NEC5 780 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 RERGQ96A58 199 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms